Mercenaria mercenaria (northern quahog): 123550397
Help
Entry
123550397 CDS
T07835
Name
(RefSeq) estrogen receptor-like
KO
K08524
retinoid X receptor alpha
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
123550397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123550397
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mmer03310
]
123550397
Transcription factors [BR:
mmer03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
123550397
Nuclear receptors [BR:
mmer03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
123550397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
123550397
NCBI-ProteinID:
XP_053380899
LinkDB
All DBs
Position
15:32060344..32068994
Genome browser
AA seq
694 aa
AA seq
DB search
MSNSSDVGISPVLLQAISQSLSSTSNKPGAAIGTKMESSNGTPVGSGAADQNLADRLLKQ
QQGNAASVIQSTNESSIPIQTDTIKTMLKIKMAANALTKSALQKTHSSDSIKNEEKETVS
SSASDIAMANVLTALASQSGKTFITPNTNSGTASTVAGQNGGALQSLSSVSKEAEFRAVQ
VGDRKILIRTKPGAGGSDIAPQVVTSSENNNSGASANETVFTVIKPEPDVVENVEHDQVQ
PDESDVLVTDSNLNTSITIDHTNETIVTGKSNIVDNSLLLSDTQSTAVVTSPETGAGTQL
VFSFNPNPSTSEMAMDGRLKVIEHEGKRYILQTHDYDSTQVAVTQPDEPQSYTVQIGTDD
GVTYTSVAEQEVVTVGQQQEEAGNVSGFKSPMSGSPCPICGDNVSGFHYGIYTCESCKGF
FKRTVQNKKTFVCPRNGECEIVLENRKKCPACRFAKCLVMGMKLEAIRQDRTRGGRSSYG
GSSPFEEKKRRPIKIVPRRTSYQSESALASVLNAGAVRPEKPYVPQILTDIMNLESLLCD
DDIPSSISAEDFSISNPNVFLTLLQLCELKLYKIVRWARNLPYFANISTDDQILLLQNCW
CELLALTLCWKSLQLSNEIIFFHGQAIDLEKACSLDLGEMFTKMSAVVEQFKRLKVDQYE
CVALKVIILICPGKYSFGQYMIIFKKNIKFTLAA
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattcgagtgatgttgggatatctcctgtgctccttcaagctataagtcaatca
ctgagttccacaagtaataaaccaggtgctgcgattggcactaaaatggagagctcaaat
ggaacacctgtcggaagtggtgctgctgatcagaaccttgcagaccgactgctgaaacaa
caacaggggaatgctgccagtgtgatacagtcaacaaacgaatccagtatacccatacag
acggataccattaagactatgttaaagataaaaatggcagctaatgcattaactaaaagt
gctttgcagaaaacacacagttcagattctattaaaaatgaagaaaaagagacagtcagt
agctctgcatcagatattgccatggctaatgtgctaacagcccttgcatctcagagtggt
aaaacatttataactcctaacaccaacagtggtactgcttcgacagtggctggacagaac
ggtggtgcattacagagcctttctagtgtgtcaaaagaagcagagttcagagcagtccaa
gttggtgatagaaaaatacttatcagaactaagcccggcgctggaggatctgatattgct
ccacaagttgtaacttcctctgaaaacaataattccggggctagtgctaatgaaacagtt
ttcacagtgatcaaaccagaaccagatgtagtagaaaatgtcgaacatgatcaagttcag
ccagatgaatcagatgttctagtaactgactcaaatttgaataccagtattacaatagac
catactaatgagacaattgttactggcaagtctaacatagtagacaacagtttattactc
tctgacacacaatcaacagcagtcgttacaagtcctgaaacaggggcgggtactcagctt
gtgttttcattcaacccaaatcccagtacttcagaaatggccatggatggaaggctgaag
gtaattgaacatgaaggaaaacgttatatcttacaaacacatgactatgactcgacgcag
gtggctgtcacccagccagacgagcctcagtcgtacactgttcaaattggtacagatgat
ggtgtgacatacacgagtgtagctgaacaggaagttgttacagtcggtcagcaacaagaa
gaagctggtaatgtgtcaggattcaagagtccaatgtctggaagcccttgtcctatctgt
ggggataatgtttcaggattccactatggtatatatacatgtgaaagctgtaagggattt
ttcaagcgtactgttcagaataagaagacgtttgtttgcccaagaaatggagagtgtgaa
atagtgttagaaaacaggaaaaaatgtccggcatgtagatttgccaaatgtcttgtgatg
ggaatgaaacttgaagcaatcaggcaagacagaacgagaggaggaagaagtagttatggg
ggaagttctccatttgaagagaaaaagagacgaccaatcaaaatagttcctcgacgaaca
agttatcaaagtgaaagtgctcttgcttcagttttgaacgctggtgcggtgcgtccggag
aaaccgtatgtccctcagatattgactgatataatgaacttggagtctttgttgtgtgat
gatgatattccgtcaagtatctctgcagaagatttctcaatatcaaatccaaatgtgttc
cttacattactgcaattgtgtgaattgaaattgtacaaaattgtacgatgggctcgtaat
ttaccgtacttcgcaaatatttcgacagatgatcagatcttgctgctgcagaattgttgg
tgtgagttactggccctgacattgtgttggaaatctctgcaattatcaaatgaaataata
ttctttcatggacaagcaatagatctggagaaagcatgttcattagatcttggagaaatg
tttacgaaaatgtcggcagttgttgaacagttcaagcggctgaaagtggaccagtatgaa
tgtgttgcattaaaagtcatcatacttatttgtccaggtaaatacagttttggtcaatat
atgattatctttaaaaaaaatattaaatttactttggcagcatag
DBGET
integrated database retrieval system
