Mercenaria mercenaria (northern quahog): 123551033
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Entry
123551033 CDS
T07835
Name
(RefSeq) PR domain zinc finger protein 1-like isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123551033
Transcription factors [BR:
mmer03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
123551033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
SET
zf-C2H2_jaz
zf-C2H2_6
zf-met
zf-MYST
zf-C2H2_15
zf-C2H2_3rep
zf-C2H2_FBX41
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-GeneID:
123551033
NCBI-ProteinID:
XP_045195577
LinkDB
All DBs
Position
4:12553536..12637409
Genome browser
AA seq
891 aa
AA seq
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MAESEEGESSDGYDNDAWLYQDDSQYSLEDGWDMTQLKEEEFEEFCVYIVHDRACEKVCR
NRAQASLPRNLTLKPSLTQPDHAQGVWSVDYIPRGTRFGPLNGEITKEEPLRRGDTNRIC
LWKIFKDNKVCEFMDVGDTSHSNWMHYVNFSYNSGQQNVIACQIDYNIYFYTIKPIPPNT
ELLVWYCREYAERLNVPRTGEEMLQAWKRQVVNQQVPMPLPMYIEERHLCLNRHLSRTPP
KSVKEKSAKDDHCDSDDSGVREDGYAIDYSLHKRDGSPTSDDLDHNTHGKRTSFSGEDSL
SPFKSPKLGTGSGSAFTSKISPISSVRSSLPSIMAPSPIKLSHSTPKRSPSMGFYENLFL
KKMKESNEQDSEPKWKEPKLSPTSHDMKQEVKDEVSKDVEKKPDISHGTKDMKTPTSESF
NPFPFRPFGSSLMDKPVMPPYLSMPTDEMYSKFMTPGKMQPPAGPLYFPQTGLPGMYPFG
PMYPFNHYQQLPWPMFHPPYPPMGMNNPQHQQSIPPPAPHLQQPPFPRPPPSHSGPPSGD
PLNLSIKHKSNIDGRGHRSLPYPLRKKDGKMLYECKFCLKTFGQLSNLKVHLRTHTGERP
FVCKTCGKGFTQLAHLQKHHLVHTGEKPHECQVCHKRFSSTSNLKTHMRLHSGEKPFMCK
LCPAKFTQFVHLKLHKRLHTNERPYECPQCNRKYISASGLKTHWKTGNCIPSGMSMDLSM
LIQHTTEAAIKEMSEYGDMHDIAMIDNGEYEKFEKSDRNGLSPEKDDKNTDDKSEKSFDQ
EQFDKYRMERLGYNLFDKERIDSTNQSIGSEPSSPVGSDGDSLHSDDMDQLSPRQPHELS
PQSDSSQGQRLDFLSEPRHSGEEKLEESKREYEQPSFKEQSYQPIDCSTKC
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtcggaggaaggagaatcatcagacggttacgataatgatgcgtggctttat
caggacgattcacaatacagcctggaagatggatgggacatgactcaactgaaagaggaa
gagtttgaggaattttgtgtctacatcgtacacgaccgtgcctgcgagaaggtgtgcagg
aatcgcgcacaggcctctctaccacggaacctcacactcaagccctcactaactcagccg
gatcatgcacaaggggtttggagtgttgactacatccccagaggtaccaggttcggaccc
cttaacggtgagattaccaaggaagagccgctaagacgtggagatacaaacagaatctgt
ctctggaagatatttaaagacaataaagtttgtgagttcatggacgtaggcgacacaagt
cacagcaactggatgcattacgttaacttcagctacaactctggacaacagaacgtaatc
gcctgtcagatagactacaacatttatttctacacaataaagcccataccgcccaatacg
gagcttcttgtgtggtattgcagagagtacgcagagaggctgaatgttccgagaacaggc
gaagaaatgcttcaggcatggaaaagacaagttgtcaatcagcaggttccaatgccgtta
ccgatgtatatcgaggagcgtcacctgtgcctgaaccgccacctttcaagaacgccacct
aaatcagtaaaagaaaaatcagcgaaagacgatcattgtgacagtgatgacagtggtgtg
agagaagatggttacgctattgactacagtctacataaacgtgatggcagtccaacaagt
gacgacctggatcataatacgcacggaaaacgtacatcttttagtggagaagattcttta
tcaccctttaaaagtccaaaattgggtactggttcgggaagtgccttcacgagtaaaatc
tcaccaatcagcagtgttagaagtagtctaccaagtatcatggcaccatcacctataaaa
ctttcacatagcacccctaaaagaagtccgagcatgggcttttatgagaacttgtttttg
aagaaaatgaaagaaagtaatgaacaagattctgaaccaaagtggaaggagccaaaacta
agccctactagtcacgacatgaaacaagaagtaaaagatgaagtatcaaaggacgttgaa
aagaagcctgatattagtcatggaacaaaagacatgaaaacaccaacgtctgaatcattt
aatccatttcctttcagaccatttggtagtagtttaatggacaaaccagtcatgccacca
tatctaagtatgccaacagatgagatgtattctaagtttatgacaccaggaaagatgcaa
ccccctgctggaccattgtatttccctcagactggcctaccagggatgtaccctttcggt
ccaatgtatccatttaaccactaccaacagctgccttggccgatgtttcatcctccatat
ccaccaatgggcatgaacaatccccagcatcaacagtcaatacccccacctgcgcctcat
ttgcagcaaccgccattcccacgcccaccaccaagccattctggacccccaagtggagat
ccattaaacctcagcatcaaacataaatctaatatagacggaaggggccacagatccttg
ccatatccactcaggaaaaaagacgggaaaatgttatacgagtgcaagttctgtctgaag
acgtttggtcagctatcaaatctcaaagtccatcttcggacacataccggagaaagaccg
ttcgtctgtaagacatgcgggaagggattcacacagcttgcccatctacagaaacaccat
cttgtccataccggtgagaaacctcatgagtgccaggtgtgccacaaacgatttagctcc
acttcaaatctgaaaacgcatatgagattacacagtggtgagaaaccgttcatgtgtaaa
ctttgtcctgccaagtttacacagtttgtacatcttaaattgcataaaagactccatacc
aatgagagaccttacgaatgcccccagtgcaatagaaaatacatcagtgcaagtggacta
aaaactcattggaaaactggaaactgtattccgtctggaatgagtatggaccttagtatg
ttgatacagcacaccacagaggcggcgataaaagaaatgagtgagtacggggatatgcat
gatatcgctatgattgacaatggtgaatacgaaaaatttgaaaaatctgaccgtaacggt
ttgagtcccgaaaaagatgataaaaataccgatgacaaaagtgaaaaatcgtttgaccaa
gaacagtttgacaaatatcgtatggagagactggggtacaatttattcgataaggaaaga
attgacagtactaaccagtctataggaagtgaaccttcttcccctgtaggtagcgatgga
gacagtctacatagtgatgatatggatcaattgtcaccacggcaaccacatgaactttca
cctcagtctgatagttctcaaggtcaaaggttagactttctcagtgaaccaagacattca
ggtgaagaaaaattagaagaatcaaaaagagaatatgaacaaccgtctttcaaagaacaa
agctaccaaccaattgactgttcaactaagtgctag
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