Mercenaria mercenaria (northern quahog): 123551044
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Entry
123551044 CDS
T07835
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123551044
Enzymes [BR:
mmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
123551044
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
123551044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
Helicase_PWI
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
123551044
NCBI-ProteinID:
XP_053396031
LinkDB
All DBs
Position
4:complement(13567344..13823398)
Genome browser
AA seq
2152 aa
AA seq
DB search
MSQLPRLSGALRVFTGLSGAVPSESFQDEELLKKRQFMTKKKTSVEGSGWQKLVEKIKEN
SSASKDELAGWLKELLHDANQIAGDTADEEVIESAAVYLFSVFKTADKVTQKQTNTLKSV
FGPFPASVATKTCSIVNKITYTLPDDVIQLLGNQEREEADGEAAVTEFGQSIKFVYQKPN
IKDGELSSTDSEEEDRQMEVDLNYTRKKHSSGPKQEVKQTTSQNIDAEWLQQEVAKYYEG
SDSYLGMRSEDFAATIFDVLSSPKSDSELQNDLFELLGFERFELIQSLLGNREKLLYNAT
YEPEMKRSNMQRSKNEGVGKPGYGCQVTIQSEQEKAMLKQLRKDEKKMDKRSMRTEEIDD
YGFNPAELRAQREAALLTAKTAPLFSGKSAHPTRERYPYVFDKMEEARVSSAFIGGVKMH
LPDTVSRNNNKVYEEVNIPPSDAAPTHVGDKRVTIDKLDEIARVAFKNTKCLNRIQSVVF
ETAYKTNENLLICAPTGAGKTNIAMLTILHEMKQHISQGVIKKDDFKIIYVAPMKALAAE
MVRNFGNRLEPLGISVRELTGDMSLTKAEILKTQMMVTTPEKWDVVTRKSTGDVALAQLV
KLLIIDEVHLLHDDRGSVIESLVARTLRQVETSQSMIRIVGLSATLPNYLDVARFLHVNP
YQGLFFFDGRFRPVPLGMSFIGIKALNRVQQLQDFNAVCYEKVLYQVKRGYQVMVFVHAR
NETVRTASVLRDHAKNNGDINLFLPEQSGSYGDALKNVMKSRNKQMKELFTDGFSTHHAG
MLRQDRNLVEKYFAAGHIKVLVCTATLAWGVNLPAHAVVIKGTQIYDAKKGSFVDLGILD
VMQIFGRAGRPQYDTFGHGTILTTHDKLSHYLSLMTRQNPIESQFINSLTDNLNAEIALG
TVTNVEEAVKWLSYTYLYVRLTFNPLVYGVPYKSVEEDPTLTQYRTELITVLVINEYLKT
VMTEADIFALVSKSQEFDQIKVRDEEMEELEKLLHETCEMQVPGGVENSYGKVNILLQSF
VSRQYLDSFSLVSDQSYVAQNAARITRSLFEICLKKGWPIMASRLLNLSKTIDKRIWGFE
TPLRQFSVLTAEIIYKLEARKLKIDKLREMDAKEIGHMVHHVKMGSTIKKCVHQLPLVDL
EATIQPITRTVLRVRLTITPMFKWDDKVHGTGAESFWIWVEDPDNNHIYHSEYFLLHKKQ
MYSKEPQMLVFTIPIFEPLPTQYYVKAISDRWLGCESMCAISFQHLILPERHPPHTELLD
LQPLPVTALMNPMLETLYNFSHFNPIQTQLFHVLYHSDHNVLLGAPTGSGKTIAAELAIF
RVFRERPNHKAVYIAPLKALVRERMEDWKVRIEQKLGKKVVELTGDVTPDMRAIAKADLI
VTTPEKWDGVSRSWQTRNYVKAVSLIVIDEIHLLGNDRGPVLEVIVSRTNFISSHTEKKV
RVVGLSTALANARDLADWLAIGQVGLYNFRPSVRPVPLEVHIHGFPGQHYCPRMATMNKP
TFQAIKSHSPSKPVLIFVSSRRQTRLTALDLIAFLAGEDNPKQWLHMAENEMENIISGVR
DTNLKLTLAFGIGIHHAGLIERDRKITEELFVNSKVQVLIATSTLAWGVNFPAHLVVVKG
TEFYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKHFYKKFLYEPFPVE
SNLLEVLADHLNAEIVAGTITSKQDAMDYITWTYFFRRLVMNPSFYNLDDTDHNSINKFL
SGLVEKALYELESSYCLEVDEDGSTVLPQTLGRIASYYYLTHVTMRMFQSELQADSAIPD
LIEVLSNASEYAELPVRHNEDQINSDLAKQIPLEVNPHTMDSAHTKTNILLQCHFGYIPL
PSTDYNTDTKSVLDQAIRICQAMLDVAADQGWLVTSLGITQLVQMLVQGRWWHDSSLLTL
PHVTPYHIYCFRSKKGGKEGTRRIETLPELMAVCDGHYNVLFDMLQDEMEKQHIDQIYQV
LSKLPQIEVMFTVKGWWEGGVGQQEQKAIDTSSHGGRVSDKQWIQVHADQEYVIQVQLNR
INKLKKYDRKAYTPRFPKPKDEGWFLIIGNVDSKDLVALKRVPYIKGKSEVQLSVYMPET
PGRVIYTAYLMSDSYLGLDQQYDLHFDVIEQSIEAQVNTELKDELANLSFDS
NT seq
6459 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagctccctagactgtcaggagctctgagagtcttcactggactctcaggagcg
gttccatcagaatcattccaagatgaagaacttctgaagaaaagacagtttatgacaaag
aaaaaaacttctgtggaggggtcaggatggcagaagctggtagagaaaataaaagagaac
agttcagcatctaaagatgaactagctgggtggttaaaggaacttttgcatgatgctaat
cagatagctggagatacagctgatgaagaagtaatagaaagtgcagcagtatatctcttc
tctgtgtttaaaacagctgataaagtgacacagaaacaaactaacacattgaaaagtgta
tttggtcccttccctgcatcagttgctacaaagacttgttccattgtgaacaagattaca
tacactttgcctgatgatgtcatacagttgctaggcaaccaggaaagggaagaagcagac
ggcgaagcagctgtcacagaatttggacagtcgattaaatttgtgtatcagaaaccaaat
ataaaagatggagaactgtctagtacagattctgaagaggaagatagacaaatggaggta
gatctaaattatacccggaaaaagcactcatcaggccctaaacaggaagtgaagcaaaca
accagtcaaaatattgatgcagaatggttgcaacaggaagttgcaaagtattatgagggt
agtgactcttatctaggaatgagatcagaagattttgccgctacaatatttgatgtcctg
tcatctcctaaatcagattcagagttacagaatgatttgtttgaacttcttgggtttgag
agatttgaactgatacagagcctgttagggaacagggagaaactgctgtataatgctaca
tatgaaccagagatgaaaagatctaacatgcagaggtccaagaatgaaggtgtagggaaa
ccagggtatggatgtcaggtcacaatacagtctgagcaggaaaaggccatgttgaaacag
ttgaggaaagatgaaaaaaagatggacaaacgtagcatgcgtactgaggaaattgatgat
tatggatttaatcctgcagaattacgtgctcaaagggaggcagctttactgacagctaaa
acagctccattgttcagtgggaaatctgcacatcctaccagagaacgctatccatacgta
tttgataaaatggaggaggcaagagtgtcctcggcttttataggaggagtaaagatgcat
ttaccagatacagtgtctcgtaacaacaataaggtgtatgaggaagttaacataccacca
agtgacgctgcaccaacacatgttggtgataaacgtgttactatagacaaacttgatgaa
attgcaagagtggctttcaaaaatacgaagtgcttgaatcgtatccagtcggttgtattt
gagacggcgtataaaacaaatgagaacttgttgatctgtgcaccaacgggtgcaggaaag
acaaacattgccatgctgacaatacttcatgaaatgaaacaacatatctcacagggtgtc
atcaagaaagatgactttaagataatctatgttgcaccaatgaaggccctggctgctgag
atggtgcgtaacttcgggaatcgacttgaaccacttggcatctctgttagagaacttact
ggtgatatgtcgctcaccaaagctgaaatcctgaaaacacagatgatggtaactaccccg
gagaagtgggatgttgtgacacggaagagtactggtgatgtagctttagcccagctggtc
aagttattgatcatagatgaagtgcacttactgcacgatgacagaggctccgtcatagag
agtttagtggctcgtacactgagacaggtggagacatcccagagtatgatcagaattgtg
ggcttatcagcaaccctgccaaactacctagatgttgcgagattcctgcatgtcaatcca
taccagggactgttcttctttgatggaaggttccggcctgtgcctctaggaatgtcattt
ataggaatcaaggccttgaatcgtgtacaacagttgcaggactttaacgcagtatgttac
gagaaagttttataccaagtaaagcgtggttaccaagtgatggtgtttgtacatgcacgt
aatgagacagtgagaacggcatctgttttacgagaccatgcaaaaaacaacggggacatc
aatctgttcctgcctgaacaatcaggatcatacggggatgctctcaaaaatgtgatgaag
tcaagaaacaaacagatgaaagagttattcacagatggattcagcactcatcatgccggc
atgctacgacaggaccgtaaccttgtagagaaatactttgctgcgggacacatcaaggtc
cttgtttgtacagcaactcttgcttggggtgtgaatcttcctgcccatgctgtggttata
aagggcacacagatatatgatgcaaagaagggatcgtttgttgatctagggatattagat
gtgatgcagatatttgggcgtgctggacgaccccagtatgatacctttggtcacggtact
atactcaccacccacgacaaactgtcacactatctgtcattgatgacacgacagaatcca
atagaaagccagttcatcaacagtctcacagacaacctgaatgcggagattgctctggga
actgtaacaaatgtagaggaagctgtcaagtggctcagctatacatacctgtatgtacgt
cttacctttaacccattggtgtatggtgtaccttacaaaagtgtagaagaagaccctaca
ttgactcagtataggacagaacttataacagttttggtaattaatgaataccttaaaaca
gtgatgacagaggctgatatctttgctctggtgtcaaagtcacaggaatttgatcagata
aaggtacgagatgaggagatggaggaactagagaagttattacatgagacatgtgagatg
caggtaccgggtggtgtggagaactcttatgggaaagtgaacatcctcctgcagagtttt
gtatccagacagtatttggacagtttctccctggtgtccgaccagtcatacgttgcccag
aatgcagcaagaatcacaagatctttatttgagatctgtctgaagaagggctggcctatc
atggctagtcgattactaaatctgagtaagaccatagacaaaaggatctggggatttgag
acacctctgagacaattttctgtcctgactgctgaaattatttacaagctagaggcaaga
aaactgaagattgataaactccgagaaatggatgcaaaagagataggtcacatggttcat
cacgtgaagatgggtagtactataaaaaagtgtgtacaccagctgccattggttgattta
gaagccacgatccagcccattacacgcactgtactcagagtgaggcttaccatcacacca
atgttcaaatgggacgataaggtgcatggtacaggagcagaatcattctggatttgggtg
gaagaccctgacaacaatcatatctaccattctgagtacttcttgcttcacaaaaagcag
atgtacagcaaagaacctcagatgcttgtgttcacaataccaatatttgagccactgcct
acacagtattatgtgaaagccatatcagaccgatggctgggttgtgaatccatgtgtgca
atatccttccaacaccttatcttgccagagagacaccctccccacacagaattgttggat
cttcagccactgccagtcacagcattgatgaaccccatgttggagacactgtataacttc
agccattttaaccccatacagactcagttattccatgtattgtaccactcagaccacaat
gttctccttggggcaccaacaggatctgggaaaacaattgctgccgagttagctatattc
agggtgttcagagagcgaccaaatcataaggctgtgtacattgcacctttgaaagctctt
gtgagagaaagaatggaggactggaaagtccggattgaacagaagcttggcaaaaaggta
gtagagttgacaggagatgtgacaccagacatgagagctatagcaaaggctgacctcata
gtgacaactccagagaaatgggatggtgtttctaggagctggcagactcgtaactatgtc
aaagctgtctcacttattgtgatagatgaaatacatcttttaggaaatgacagaggacct
gttcttgaagtaattgtctcaagaaccaatttcatctcttcacacacagagaagaaagtg
agagttgttggcctgtctactgctctagctaatgccagggaccttgctgactggttagct
ataggacaggttggtttgtacaactttcgaccttcagtacgacctgttccactggaggtt
catatacatggcttcccaggccagcattactgcccaaggatggccaccatgaataaaccc
acatttcaagcaatcaaatcacactccccttcgaaaccagtactgatctttgtatcatca
cgacgacagaccagactaactgctttggatctaattgcatttctagctggggaagacaat
cctaaacaatggttacacatggctgaaaacgagatggaaaatatcataagtggagtgcga
gacaccaatctcaagttgacactagcttttggtatcggaatacatcatgcaggtctcata
gaaagggatagaaaaatcacagaggaactctttgtcaactcaaaagtgcaggtcctaatt
gccaccagtacattggcttggggtgtgaacttcccagctcacttggttgttgtgaagggt
actgagttttacgacgggaaaacgcgcagatatgttgatttccccatcacagatgtgtta
caaatgatgggtcgtgctggccgcccacagtttgatgatcagggtaaagctgttatactg
gtacatgatatcaagaaacatttctacaagaagttcctgtatgaaccattcccagtggaa
tcaaatttacttgaagtgctagctgaccatctgaatgccgagattgttgcaggaacaata
acctccaaacaggatgcgatggattacatcacatggacgtacttcttccgtagacttgtc
atgaatccaagtttctacaaccttgatgacactgatcacaacagcattaacaagttcctg
tcagggctggttgaaaaggcattgtacgagttagagagttcctactgtctagaagtcgat
gaggatggctccacagtgcttccacagacactgggaagaattgcctcctactattacctg
acacatgtgacaatgagaatgtttcaaagtgaactgcaagctgactcagctattccagac
cttattgaagttctatctaatgcttcagagtacgcagagcttcctgtacgacataatgag
gatcagatcaatagtgatttggcaaaacaaatacccctggaggtgaatccccacacgatg
gactcggcccatacaaagacaaacatcttgttacagtgtcactttggttatatacccctc
ccatccacagactacaacactgacaccaagtctgtactcgaccaggctataagaatttgt
caggctatgctagatgtagctgctgaccaaggttggctggtgacttcgttaggtatcaca
cagcttgtacagatgttagtacaagggcgctggtggcatgattcttcactgcttacacta
cctcatgttacaccatatcatatctactgttttagatcaaagaagggaggtaaggagggc
acaagacgtatagagacattacctgagttgatggcagtatgtgatggacattacaatgtt
ctgtttgacatgttgcaagatgaaatggagaaacagcatatagaccagatataccaagtg
ttgtcaaagttacctcagattgaggtgatgtttacagtgaagggatggtgggaaggaggt
gtgggacaacaagaacagaaagccattgatacttctagtcatggtggaagagtgtcagac
aaacagtggattcaggtgcatgctgaccaggagtatgtaatacaggtacagcttaacaga
atcaacaaacttaagaaatatgacaggaaggcttacaccccaaggttcccaaaacccaaa
gatgagggctggttcctaatcattggtaatgtggattcaaaagatcttgttgctttgaaa
cgagtaccttatatcaaaggtaaatctgaagttcagctgtcagtgtatatgccagagact
ccaggccgggtgatttacacagcctatttgatgagtgactcatacctaggtctggaccag
cagtatgacttgcattttgatgtgatagaacagagtatagaggcccaagttaacacagaa
ctaaaagacgaactggcaaacctcagctttgattcttga
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integrated database retrieval system
