Mercenaria mercenaria (northern quahog): 123551218
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Entry
123551218 CDS
T07835
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123551218
Membrane trafficking [BR:
mmer04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
123551218
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
123551218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WDR55
WD40_WDHD1_1st
WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Lgl_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_IP5PC_F
Beta-prop_VPS8
WD40_like
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
123551218
NCBI-ProteinID:
XP_053396742
LinkDB
All DBs
Position
4:complement(24242811..24388693)
Genome browser
AA seq
1459 aa
AA seq
DB search
MSGKMKKIRGMLDGLRQSVGSSSPKSETEIEETLRSEDLQVCKTVRHGFPYQPTSVAFDN
VQNILAIGTKSGSLRILGQPGVDLHCHHGSEVAVQQILFLINDGALVTCCSDDSLHLWNF
RQKRPEIVHSLKFQRERITYCQLSFQSKWLYVGTERGNIHIVNIESFMLSGYVINWNKAI
ELSRKTHPGPVLHLSDNPLDPGKLLVGFESGAIVLWDLKNKTADFRYQAHESLRSITWHH
EGKQFMSCHTDGSLLTWNIKSQGKPVSIITPHAKVGKDGRPDACKAITKVEWKSSRTGLG
RWLRFITSDPLIIFSGGMSYDRAGRTPCITVMSGKNTTVLEMEHTIIDFVVLCETPWQND
FQDPYAIVVLLQNDLVVIDLTSPGYPCFENPYPMDIHESPVTACQYFADCQTDLIPALYS
VGSSKHKRTGFSEKVWPIKGGQWGTATSSYSEIIVTGHADGSLKFWDASAVTLQVLYKVK
TAKIFEKPKNKVLDGQDDDPFAIYMIYLDQESRLLTLAGATHVMLFKFSKQEASLEVPSL
EVSIVYEVFDDLDSPDLDYPKPSLGVATQQHSGSVGSYSSNTSDSTKTSKPSLSVLSQQQ
KSGGSMGSYSSDSTKPEQITALRVRSGARKWVAGYQPDIVCLLTWMDSEHPGNITSISIN
SSYGLLAFGNESGLAIVDIIQKTCLLNLGTPDLYGSMDPYQRAPRSPRGKKPMQPQALDG
SNPALNDEGARSPTSDQPTSPDALSPIAPPRKKRHSKQMLILNDSKSHRKNDTGPQTAPP
TATCFDYSDFSSHNKDLSDSSTATSPMEPSPGVVIIPPTPLTARKESDTEKPSEGKSIEV
LSPGVKKTLTGRTSSLPLVPAEDNDKSNINDKTKSKSHDNILSTEASIVNSKEDTIHVKI
MDADHDSKHHHHSHKYSIKKFKQRFRHGKKRDKSAERSRKHSSENESETHSENESCSHDE
LASQGSRSENDESLLTDDDLNAGGDDAAFTSEKKNGFFRRMSVKVKQLVLRHDDEEESEM
EKKLKKREERIVTVNDLTEDNNNSKPLFNKMTVKELVHGPQVVYLKPDSSASDKNDGSSF
SRSRSSSMSSLENVSKEAIQCLVFADSYTRKFDNFTSPCLWVGTSLGSVLVIVLNLPPSG
EQRLSQPVIVSPSGTIFRLKGAIQCMSFLDCNGMIIPTVTSGAWRDSVKEDQAKNSKTQN
TTPQKLKISPSSSTEVTDRQFAIICSEKQARVVSLPSQTCPYKARISESSFIIKADVVNL
RGESVCLACYVANGHIMVYSLPSLKLLLDVEFLALTDLRVARTFCFSNHGHAMYMCSPTE
LQKITYSADFCDNLNEMLGELFLPTETPDAPKQSFFKNLFGGGPSALDREELFGEGSGKS
ARGTATRVPGTGGMQNLQAQAQAAVGGEVGRARLLLGERGEKLAGVSDRTEEMALQAEAY
ANTAHLLMQKYKDKKWYQF
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggaaaatgaaaaagattcgtggcatgttggacgggcttcggcagtcggttggc
agttcttcgccaaaatcagaaaccgaaatcgaagaaactctgcggtcagaagatctccaa
gtgtgcaagactgttcgacatggttttccctaccagccaacttcagttgcatttgataat
gtacaaaacatcttggccattggaacaaaatcaggatcacttcgaatactgggtcagcca
ggcgttgatcttcactgccaccacggaagcgaagtcgcggttcaacaaatcctgttcctt
attaatgacggtgcacttgtcacttgttgttctgatgacagtctacatttatggaacttc
agacaaaaacgaccagaaattgtacattccttaaaatttcaaagagaaagaataacttat
tgtcagctatcattccaaagtaaatggttatatgttgggactgaacgtgggaacatacac
attgtcaatatcgagtctttcatgctatctggatatgtcataaattggaacaaagccatt
gaactttctcgtaagacacatccaggtcctgtcttacatttgagtgacaatccattagac
ccgggaaagttactggtaggatttgaatctggagccattgtcctgtgggacctcaaaaat
aaaacagcagactttagataccaagcgcatgagtcactacgttctataacatggcatcat
gagggtaaacagtttatgtcgtgtcatacagatggcagtcttctaacgtggaatattaag
tctcaaggaaaaccagtcagtattattacacctcatgcaaaagttgggaaagatgggcgg
ccggatgcttgtaaagctataaccaaagtggaatggaaatcatcacgaactgggttaggc
cgatggctaaggttcataactagtgaccctctgataattttttctggcgggatgtcatat
gatcgtgcaggacgtacaccttgtataactgtgatgtctggtaaaaataccactgtactc
gagatggaacataccatcatagacttcgttgtcctatgtgaaaccccttggcaaaatgat
ttccaagacccttatgcaattgttgtgttattacagaatgacctagttgttattgatctc
acttctcctgggtatccttgttttgagaacccttaccctatggatattcacgagtcccct
gttacagcgtgccaatattttgcagactgtcagactgatcttataccagccctttattct
gtgggatcttctaaacacaaacgaacaggatttagtgaaaaggtatggccaatcaagggt
ggacagtggggcacagcaaccagcagctactcggagattattgtaacaggacatgcagac
ggctcccttaagttctgggatgcatctgctgtaacattgcaagtgttgtataaagtcaaa
actgccaaaatatttgagaaaccgaagaataaagtgctagatggacaggatgatgaccct
tttgctatatatatgatatatttagatcaagaaagtcgattgttaacattggctggagcc
acacatgtgatgctgtttaaattttctaaacaagaagcgtcattagaagtaccatcatta
gaggtatcaatagtatatgaagtgtttgatgacctggattctcctgacctagattacccg
aaaccaagtctgggtgtggcgacacagcaacatagtggcagtgtgggctcatactccagt
aatacttcagatagcaccaaaacttccaaacctagtttaagtgtattatcccagcaacaa
aaatcgggcgggagtatggggtcatactcctccgacagtaccaaaccagaacagattaca
gcattacgggtgaggagtggggcgcggaaatgggtagctgggtaccagccagacattgtg
tgcctgttgacctggatggacagtgagcacccaggcaatataaccagtatatctatcaac
tcttcatatggtctgttagcatttggtaatgaatcaggcttggctatagtagatattatt
cagaaaacatgtctgctcaacctcggaacacccgacttgtatggttctatggatccgtac
caacgggccccacgctcacccaggggcaagaagcccatgcagccccaggctctagatggg
agtaatcctgcacttaatgacgaaggggcgcggtctccaaccagtgatcaacctacttct
cctgatgccttaagtccaatagcacccccgcggaagaagcgccatagcaaacaaatgttg
atcttgaatgattcaaaatctcatcggaaaaatgacactggacctcagactgccccacca
acagcaacctgttttgattatagcgatttttcgtcacataacaaagatctttcagatagt
tcaactgcgacgtctccaatggagccatctccgggtgttgtcattattcctccaactcca
ctcacagctcggaaagaatcggatacagaaaaaccaagtgaaggtaaaagcatagaggta
ctgtcgccaggagtgaaaaagactttgacagggagaacatcatctttgcctctcgtacct
gcagaggataatgataaaagcaatattaacgacaaaacaaagtcaaaatctcatgataat
atcttaagtaccgaggctagcattgtaaatagtaaagaagatactattcatgtaaaaatt
atggacgcagaccatgattctaaacatcaccatcatagtcataaatactcaattaagaaa
tttaagcaaaggtttaggcatggtaaaaagcgagacaaaagcgccgaacgaagtcgtaaa
cattctagtgaaaacgaaagcgagacacattcagaaaatgagagttgttctcatgatgaa
ctagcaagccaaggaagtagatcggagaatgatgaatccctattgacagatgatgacttg
aatgctgggggtgatgatgcagcgtttacgtctgaaaagaaaaacggattctttaggagg
atgagtgtaaaggttaaacaacttgttcttagacatgatgatgaagaagaaagtgaaatg
gaaaagaagttaaagaaaagagaagaacgaattgttacagttaatgatctaactgaagat
aataacaactcaaaaccattgtttaataaaatgacagtgaaagagttggtgcacggtcca
caggtggtgtacctcaaaccagattcaagtgcctctgacaagaacgatgggtcgtcattt
tctcgatctcgaagttccagcatgtccagtctcgagaacgtttccaaggaagccatacag
tgtcttgtctttgctgattcatatactcgcaaatttgataattttacaagcccttgttta
tgggtggggacaagcctaggctcagtgttggtgatagtgctaaatcttcctccatcgggg
gagcagcggttgtctcaaccagtgatagtttcacctagtggaaccatattccggttaaaa
ggtgccatccagtgtatgtcgtttcttgactgtaacggaatgatcataccaactgtcacg
tccggtgcgtggagagattcagtgaaagaagatcaggctaaaaactccaaaacacaaaat
acaacacctcaaaaattaaagatatcaccaagttcttcaacagaagttacagacagacag
tttgcaatcatatgttcagaaaaacaagcaagagttgtttccttaccatcacagacatgt
ccttacaaggcaagaatatctgagtcatcctttattataaaggctgatgttgttaatctc
aggggtgagagtgtatgtttggcatgttacgttgccaacggacacatcatggtgtacagt
ctacctagtctcaaactgctgcttgacgtcgaatttcttgctctcacagatctaagagtt
gcaaggactttctgttttagtaaccatggacatgcaatgtatatgtgttcaccaacagaa
ctacaaaaaataacatactctgctgacttttgtgataacctgaatgagatgttgggagag
cttttcttgcctacagaaacacctgatgcacccaaacagagcttcttcaagaacttgttt
ggtggaggaccctcagcactagacagagaagaactttttggtgaggggagtggtaagagt
gcacgtggtacagcaaccagggtaccagggactggtggcatgcagaacctacaggcgcag
gcgcaagcagcagtaggtggggaagtgggtagagccagactgctactgggtgagagagga
gagaagttagctggagtaagtgatagaactgaggaaatggcattgcaggcagaggcttac
gctaacactgctcatttacttatgcagaaatacaaggacaaaaagtggtaccagttttaa
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integrated database retrieval system
