Mercenaria mercenaria (northern quahog): 123551510
Help
Entry
123551510 CDS
T07835
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease-like isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
123551510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123551510
Enzymes [BR:
mmer01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
123551510
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
123551510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
123551510
NCBI-ProteinID:
XP_053396966
LinkDB
All DBs
Position
4:complement(40720114..40749090)
Genome browser
AA seq
383 aa
AA seq
DB search
MPPKKNVKTSKSPEKSEEQSTEQTAVVQAQSPKKRGKKAEKETADGEPTSKSPEKSEDQS
AEQTAVAQSPKKRGKKAEKETADGEPPAKKSKSAKAEEKTKLRKESSLTKGMDFSHDCQT
TDGRKPNWKIASWNINGIRAWMDKGGLSYIADEKPDILCVQETKCAQEDLPADVKVDGYH
DYWSSAEQAGYAGTGIYSKTKPINVTYGLGIKKHDSEGRVITAEYDKFFLVTAYVPNSGR
GLPRLPYRSKEWDVDFREYLNNLNKTKPVIMCGDLNVAHLEIDLANPKTNKKTAGFTAEE
RQGFTDLLAEGYIDSYRELYPETEGAYSFWTYMGNARAKNVGWRLDYFVLSERLKEDLCD
SVIRKDVMGSDHCPIVLYMALKE
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaaaaaagaacgtaaagacctctaaatcaccagaaaagtctgaagaacaaagt
acagaacagactgctgtagtacaggctcaaagtccaaagaagaggggcaagaaggcagaa
aaagaaactgcagatggagaaccaacctctaaatcaccagaaaagtctgaggaccaaagt
gcagaacagacagctgtagctcaaagtccaaagaagaggggcaagaaggcagaaaaagaa
actgcagatggagaaccacctgcaaagaagtcgaagtctgcaaaggcagaggaaaagaca
aaactacgtaaagagtcgtccttgactaagggaatggatttctcacacgattgccagaca
acggatggaagaaaacccaactggaagattgcctcatggaatatcaatggaatcagagct
tggatggataaaggaggtctgtcgtacatcgcagatgagaagccagatatcctgtgtgtc
caggagaccaaatgtgctcaggaagatcttccagccgatgtcaaagtcgacggttaccat
gactactggtcctctgctgaacaggctggctatgctggcacaggcatatacagcaaaact
aaacccattaatgtcacttatggactaggtattaagaagcatgattcagaaggtagagtg
atcacagcagagtatgacaagttcttcctcgttactgcttatgtgccaaactcaggacgc
ggtttacctcggttaccatacagaagtaaagaatgggacgtagactttagagagtacctc
aacaatctcaacaaaaccaaaccagtcataatgtgtggtgacctcaatgttgctcattta
gaaatagatttggcaaacccaaagaccaataaaaagacagcaggtttcacagctgaggag
aggcagggatttactgatctgttagcggagggatacatcgactcatacagggagctgtac
ccagaaactgaaggggcttactccttctggacctacatgggaaatgcaagggccaaaaat
gttggatggagacttgactacttcgtgttatcagagaggttgaaggaagatctgtgtgac
agcgttatccgtaaagacgttatgggaagtgaccactgtccaatagttctctatatggcc
ttgaaagaataa
DBGET
integrated database retrieval system
