Mercenaria mercenaria (northern quahog): 123551605
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Entry
123551605 CDS
T07835
Name
(RefSeq) AT-rich interactive domain-containing protein 2-like isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123551605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123551605
03021 Transcription machinery [BR:
mmer03021
]
123551605
03036 Chromosome and associated proteins [BR:
mmer03036
]
123551605
Transcription factors [BR:
mmer03000
]
Eukaryotic type
Helix-turn-helix
ARID
123551605
Transcription machinery [BR:
mmer03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123551605
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
123551605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
Motif
Other DBs
NCBI-GeneID:
123551605
NCBI-ProteinID:
XP_045196582
LinkDB
All DBs
Position
4:complement(47904916..47950444)
Genome browser
AA seq
1883 aa
AA seq
DB search
MAKNLNKDLRRYEQEKREFIDGLRNFHYNRGTSFQLLPRCGNKEVDLYLLYQTVTRQGGW
KKVTENEQWNEVLEELGLPIACLNADQAVKHIYIRYLNIYEQIHFLGEDPKTVDTRRDDE
GPIRKKHCGPQYNVPLTYNHAQHDVAANLRGGFGLCTKYAKHSDYDKLEKALLSGLPNEV
DFVINVCTLLSNESKHTLRLDKCAVLTELLLAHIGIFEEGDIAMEKLYENGWRKNSDREF
IRFWYDTVNDEEARELISFTRKDSRNFVGKEMLQLGRNLGVEDKEGIRITQIAIIIRNLS
FDVDNMKFLASNNLVFRFLLLCLHCSYGTLRQLALDTLGNLAAQFILDPTDSFKSKALLS
LVVNCITSPDKFAVVTGLEMVSKLSKREENEYVISEKLDTSIYEEIAKYLTISDIQLIVY
SLEALYQLSEIGEETNSKIAEVSNTVDTLVSLITVEAQSYGPNSLIGIKVVEYCPPPHLT
GGVTEGVPAAVGPPPGSGTPQPSQSQPPGQQGSMIHASSLKKSSEQSNDKGEKVVPETPA
QPSPMETTACNWMKANYEVYESSVTTHISMYKEYLSFCKRFQLNQPLVSQDFLKCLKTVF
PKTSSAMAVKEGGSREMCVLGIRKRAQQLPFSISCPVTKPACSVSIPPSVPSVTPLSSAV
RSPNLAQRLASPLPKPVMSMPVRPPVMPRPPLFNPGVPGQQVVQRQVNPIPTPVQNLSGN
TVTLPTYANTGGILASGLVSNQDNAQTNTVVNTPTSSKSKQIVKRKGSSKKNAPILPRPE
QNTPGSLPNIVPRMTQGNISQQTLVQQPVLQNVQFTTQDVVYQTVDSQNPEAKVMVKTLL
AQKIRQGNVIIQQPVQGMVNVDLGAGGDGQTIQYQTGFPQTQTTYIQYAAPSSTVQTSGQ
TYIQSQPTSQVQTFVVQPGDVYVQGQIPASSLNTQIVAQPQPVMVAPQQQILTQPQVMVS
QQPMVVSQQPMVVSQHQFMTQQPVIQSQSMPNSQFVTQQVMVQPNLTADQQTSQIPLQMS
SSLSSASSTVITTSSSPVSVNSSIGAMYSVSASQSSVTFTLSNGQQSQNPADIGVFGEVV
SDAQKVKNNPSEIDSKKPSSVENSNNSASNLESESKLDLSSSDAVAEIESAVGSIMEESV
DSAESQEEPVMIENDGNELMFEQKYQVNSEQVQYENVNSTTEVYESDEAAMAVEQLEQME
HSGEVDENDIVENVSTECTEESLDINESSEVIVGNDEMLTDQISDNGESVLNGDYKESSV
EKEALVSDAELIAKFRSETPINVPIVSENGLLEQDFEARMAVENLLKDVEFKVSSTDEDS
LEGNVNVMLCQTENPSSVKTASSGEDNDLPPGEDSQDSVTSESQTISKTSVVSHNGSSIT
DKSSENDSSVLQNGIENGVSKPLLNGDLSSPECPSVPSPGLVNGGETTKLVNGINEEDID
NKTVDKILRMNGVVNHKITPKQDESKTETENSTEKADDTCEQSVVDKGEDILAQSMIDSK
IDKSSEDSNDQSVKSDSVENKEDKTVTDGDILARSILENDIQPSDCEMPDPEPTSVTAVV
KQIIPNTMYGNIMTVQINNNTIPITFTNNAIISSKSSLGNQINVCSSRHIPTPESARDGE
LSCDSTTSSTANSDSIVSDKHSIAISQSKTSHKDSKKPLSSPKCSDSKKTKSKKRSRSKS
GGSGSTDSRPSSATSPAASASSLPEYMCEWTQCKQCFDNARSVFHHVCSAHLKTEYDGLC
KWEGCETLVRKRWSLFTHVQDHHCSESSLRVAAQRRLQSFQTGQKIAAPTIPAMVYPNDA
ANQAIKRFLPKPPYPEFMEGREGPVTKHIRLTSALILRNLAKYSAAGRSLLRKHERVISY
TCMSAVESSTALAKCLHEILQDQ
NT seq
5652 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaatctgaacaaagaccttcgccgttacgaacaggaaaaacgagagttcatt
gatggcctcagaaattttcattacaatcgagggacaagctttcagttgctgcccagatgt
gggaataaagaggttgacctttatttactgtatcaaactgtgacaagacagggaggctgg
aaaaaggttacagaaaatgaacagtggaatgaggttttagaagaacttggacttcctatt
gcttgtttaaatgctgaccaggctgtaaaacatatttatatcagatacctaaatatatat
gaacagatccattttcttggtgaggatccaaaaacagtggacacacgacgagatgatgaa
gggcccataagaaagaagcactgtgggcctcagtataatgtacctctaacatacaaccat
gcgcagcatgatgtggctgctaatcttcgtggtggatttggattatgtacaaaatatgcc
aaacacagtgactatgataaattggagaaagccctgctgtctggtctacctaatgaagtg
gattttgtcatcaatgtttgcacattattgtcaaatgagagtaaacatacactacgtctg
gacaagtgtgcagtactcacagaattgttgcttgctcatatcggaatatttgaagaaggg
gacatagccatggaaaagttatacgaaaatggttggagaaaaaattcagatcgtgaattt
attaggttttggtatgacacagttaatgatgaagaagctagagaactgatctcatttact
cgcaaagattccagaaattttgtgggaaaggaaatgttacagcttggcaggaatttggga
gtggaggataaagagggcattagaataacacagattgctatcatcatacgtaatttatca
tttgatgtggataatatgaagtttctagcaagcaacaatcttgtcttcagattcctgtta
ctatgtttacattgttcttatggaacattacgtcaacttgcactggacacgctgggaaac
cttgcagcacaattcatattggatcctacagattccttcaaatcaaaggcattgctctca
cttgttgtgaactgtattacatctcctgataaatttgcagtggttacaggtttagagatg
gtgagcaaattgagcaaacgagaagagaacgagtatgtgatctcggaaaaactggacacg
agtatatacgaggagattgccaagtatcttaccatatcagatatacagttgatagtgtac
agtctcgaagctctctatcaactgtcagagataggtgaagaaaccaacagtaaaattgca
gaggtctcaaacactgttgatacattggtgtcactgatcacagtggaggctcagtcttac
ggtcctaattcactgattggtatcaaagtggtagagtactgccctccaccccacctgaca
ggcggggtcacagagggggtaccagcagctgtagggccgcccccgggatctggcacgcct
caaccgtcacagagtcagcctccagggcagcaagggtctatgatccatgcaagttcacta
aagaaaagttctgagcagtctaatgacaaaggagagaaggttgttccagaaactcctgca
cagccgtcgcccatggaaacaactgcttgtaactggatgaaggctaactatgaggtgtac
gagtcatcggtaaccacacacatatctatgtacaaagaatatctcagtttctgtaagaga
ttccagctcaaccaaccactggtatctcaagattttcttaagtgtctcaaaactgtattc
ccaaagacaagcagtgctatggcagtaaaggaaggtgggagcagggagatgtgtgtactg
ggtatcagaaaacgagctcagcaactccctttctctatctcttgtccagttacaaaacct
gcctgtagtgtgagtatacctcccagtgtcccttcagttacacctctcagcagtgctgta
cgttcacctaacttggctcaacggctggcttcgcctttaccaaagccagtcatgtcaatg
ccagtaagaccccctgttatgccacgtcctccactctttaacccaggtgttccaggccag
caggtggtgcagagacaagtgaacccgataccaacccccgtacagaacctctcgggcaat
acagtcactttgcctacatatgccaacacaggtggaatcctagcttcagggttagtctcg
aaccaagacaatgcgcaaaccaacactgttgtcaatacaccaacatcctccaagtcaaag
caaattgttaagcgcaagggaagcagcaagaaaaatgctccaatacttccgcgtcctgag
caaaacacaccaggcagtctgccaaatattgtgccgaggatgacacagggtaatatcagt
cagcaaactttggtgcaacaaccagtcctgcaaaatgttcagtttactacacaagatgtt
gtctatcagactgtagattcacaaaatccagaggcgaaagttatggtgaaaacattgtta
gctcagaaaatacgtcagggtaatgtaataatacagcaaccagttcaaggaatggttaat
gtggatttgggggctggaggtgatgggcagacaatacagtaccaaactggtttccctcaa
acccaaacaacatacattcaatatgctgcacctagcagtacagtacagactagtggtcaa
acatacattcagtctcaaccaacatcacaagtacaaacatttgtggttcaaccaggtgat
gtttatgttcaaggtcaaatccctgcttctagtctcaacacgcagattgttgctcagccg
cagccagtgatggttgcaccacaacaacaaattcttacccagccacaggtcatggtatct
cagcaaccgatggtagtctcgcagcaacccatggtggtatcacagcatcagtttatgaca
caacaaccagtaatccagtctcaatcaatgcctaattctcagttcgtcacccagcaagtc
atggttcaaccaaatttgacagctgatcagcagacatctcaaattccattacaaatgtca
tcatcattgtcatcagcatcatcaaccgtcatcacaacatcatcgtcaccagtatcagtg
aattcatcaataggagccatgtattctgtaagtgctagtcagtcatcagtaactttcaca
ctttcaaatggtcagcaatctcaaaatcctgcagacattggtgtttttggagaagtggtc
agtgatgcccaaaaagttaaaaacaatcctagtgaaattgattctaagaaaccgtccagt
gttgaaaattcaaacaattctgcaagtaatttggaatctgaatcaaagttagatctctcc
tcaagtgatgctgtggcagaaatagaatctgcagtgggttcaataatggaagaatcagtt
gatagtgcagagtctcaagaagagcccgtcatgatagaaaatgatggaaatgaattaatg
tttgaacagaaataccaagtgaatagtgaacaggttcagtatgaaaatgtgaatagcaca
actgaggtttatgagtctgatgaagcagccatggctgttgaacagctggaacaaatggaa
cattcaggagaagtggatgaaaatgacattgttgaaaatgtatcaactgaatgtactgaa
gaatcattggatattaatgagagtagtgaagtgattgttgggaatgatgaaatgttgact
gatcagatttcagataatggagaaagtgttctaaatggtgattataaagaaagtagtgta
gagaaagaggcattagtttctgatgcagaattgattgcgaagttccgatcagaaacccca
ataaatgttcctattgtgtctgaaaatggcttgcttgaacaggattttgaagcaagaatg
gcagttgagaatctcttaaaagatgtggaattcaaagtgagttctacagatgaggatagt
ttagaaggaaatgtgaatgttatgttgtgccagacagaaaatccaagctcagtgaaaact
gctagttcaggtgaggataatgatcttccacctggtgaagacagtcaggatagtgttaca
tctgaatctcaaaccatctcaaaaacttctgtagttagtcataatggttcatccatcaca
gataaatcgtctgaaaatgattctagtgttttacaaaatggcatagaaaatggtgttagt
aagccattactgaatggtgacttaagctctcctgagtgcccatcagtgccttcccctggt
ttagtaaatgggggagaaaccacaaaactagtcaatggaattaatgaggaagatatagat
aacaaaactgtagataaaattctcagaatgaatggagttgtgaatcataaaattactcct
aaacaagatgaatccaaaactgaaactgaaaatagtacagagaaagctgatgatacttgt
gaacagtcagttgtggataaaggtgaagatattctagcacaaagtatgattgatagtaaa
attgataagagcagtgaagacagtaatgatcagagtgtaaaaagtgacagtgttgagaat
aaagaagataaaactgtgactgatggagatatactagcgcgcagtattctagaaaatgat
attcagccaagtgactgtgaaatgccagaccctgaaccgaccagtgtaacagctgttgtg
aaacaaatcataccaaataccatgtatggcaatataatgactgttcaaatcaataataat
accatacccatcacatttacgaacaatgctatcatttcatccaaaagctcattaggaaat
caaattaatgtgtgcagttctcggcacatcccgactccggaatcggctcgggacggagag
ttgagttgtgatagtaccacttcatcaacagctaattcagattccattgttagtgataaa
cattccattgctatctcacagtcaaaaactagccataaagattctaaaaaaccactctcc
agtcctaaatgtagtgatagtaaaaagacgaaatcaaagaagcgaagtcggagtaagtct
ggaggtagtggttcaacggactctcggccatcgtcagcaacatcacctgcagcttcagca
tcttcactgccagaatacatgtgtgaatggactcagtgcaaacagtgtttcgacaatgct
cgaagcgtgtttcatcatgtgtgtagtgcccatttgaagacggaatatgacgggttgtgc
aaatgggaaggttgtgaaacgttggtcaggaaacgatggtcactcttcactcatgtacag
gaccatcattgttctgaaagttctctccgtgtggcagcacagcgcagactacagtcgttc
cagacaggtcaaaagattgcagcccctaccattcctgctatggtttatcctaacgatgca
gctaatcaggccattaagagattcctacctaaaccgccatatccagaattcatggaagga
cgagaagggccagtcaccaagcatatacgtctcacctcagctcttatcttgcgaaacctg
gctaaatactcagctgctggcagaagtttactgagaaaacatgagcgtgtgatcagctat
acatgtatgagtgccgtagagtcttcaacagctcttgccaaatgtcttcatgagatcctt
caagaccagtga
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