Mercenaria mercenaria (northern quahog): 123551797
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Entry
123551797 CDS
T07835
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2-like isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123551797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmer03021
]
123551797
Enzymes [BR:
mmer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123551797
Transcription machinery [BR:
mmer03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
123551797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
123551797
NCBI-ProteinID:
XP_045196930
LinkDB
All DBs
Position
4:56422941..56458265
Genome browser
AA seq
1133 aa
AA seq
DB search
MGDLSNFDKGKLTAPVKTIEEKWKLLPSFLKVKGLVKQHIDSFNYFVNIDIKDIMKANDK
ITSDADPNFYIKYLNIYVGMPDVEEGFNITKPISPHECRLRDMTYSAPITVDIEYTRGNQ
RIVRNNLPIGRMPIMLRSSNCVLNAKSPAEMAKLNECPMDPGGYFIVKGVEKVVLIQEQL
SKNRMIVDTDVGRKGSVICSVTSSTHERKSKTDVLVKKEKYYLKHNSFSEDIPIAIVFKA
MGFECEQEFVQMIGSEEEVLAAIAPCLEECHKAGVFTQLQALKHIGNRIRQRRPMWGAAK
KTKPEEARDVLHGVVLAHVPVVEWNFKLKAVYLALMVRRVIQAQCGMVKADDRDYYGNKR
LELAGSLISLLFEDLFKKFNAELKKIADVTIPKPRAAQFDIVKHMRQDQITNGLVHAISS
GNWTIKRFKMDRAGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDHDEAPITRLAFNLGVEDIQLLSGAEITSKFVYMVFL
NGNILGVIRNYKRLVYTFRLMRRAGYINEFVSICPNHSHRCVYISSDAGRVCRPYIIVSK
GKPLVTTKHIQELSQGFRCFEDFLKEGLVEYLDVNEENDCMISLYEKEINQNTTHLEIEP
FTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLCYPQAPLVK
SKTIELINFDKLPAGQNATVAVMSYSGYDIEDALVINKASLDRGFGRCLVYRKQQCTLKR
YANQTFDKVMGPMVDATTRKPVWRHSALDSDGICAPGEKIENKQVFVNKWMPTVTNSPLS
STDQDKQPDYREVPISYKGPEPSYIEKVLISSNPEEAFLVKMLLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQADMPFSDLGICPDIIMNPHGYPSRMTVGKLMELLGSKAGVLDGKFHYG
TAFGGDKVVDLSADLIRHGFNYLGKDYVTSGITGEPLSAYIYFGPIYYQKLKHMVLDKMH
ARAKGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCE
QCGLLGYLGWCQYCKSSKNVSTLKMPYACKLLFQELLSMNIVPRLSLKRYNEV
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgggagacctctcgaattttgacaagggaaagctgacagcgcctgtgaaaactattgag
gagaaatggaagcttctgccctcattcctcaaagtaaaggggctagtcaagcagcatata
gattccttcaactactttgtcaacattgatattaaagacattatgaaagctaatgataaa
attacaagtgatgctgatccaaatttttatatcaaatacttgaatatctacgtgggtatg
cctgatgtagaggaagggtttaacatcacaaaacctatatcacctcatgagtgtcgtctg
agagacatgacatactcagcacccataacagtggacattgagtacacaaggggtaatcag
cgtattgtcagaaataatctaccaataggaaggatgccaattatgttaagaagctctaat
tgtgttctaaatgcaaagagtcctgcagagatggctaagctgaatgagtgtccaatggat
cctggaggctactttattgtaaaaggtgtagagaaagttgtattgatacaagaacaattg
tcaaagaacagaatgattgtagatactgatgtagggaggaaaggaagcgtcatttgttct
gtaaccagttccacccatgagaggaagagtaaaacagatgtacttgtaaaaaaggagaag
tactaccttaaacataattctttctcagaggacattcctatagcaattgtgttcaaagca
atgggtttcgagtgtgaacaggagtttgttcagatgataggcagtgaagaggaggttctt
gcagccatagctccttgtctagaggagtgtcacaaggcaggggtgttcacacaattacag
gcattgaagcatattggtaaccgtatacgacagcggcgtccaatgtggggagcagcaaaa
aaaactaagccagaagaagcacgagatgttttacatggtgtagtgctagctcatgtccca
gttgtggaatggaatttcaagttgaaggcagtatatctagcattgatggtacgtcgtgtg
atacaagctcagtgtgggatggtgaaagcagacgacagggattactatggtaacaagaga
ttggagttagcgggctcactaatatcactgctgtttgaagatctcttcaagaaattcaat
gctgagttaaagaagatagcagatgtgaccataccaaaacctagagcagctcagtttgat
attgtaaaacatatgaggcaagatcagataacaaatggactggtgcatgccatatcttct
ggtaactggactattaagagatttaagatggaccgggcaggtgtaacgcaggtactgtca
agattgtcgtatatctcagccctcggtatgatgacaagaatatcttcacagtttgagaag
acgcgtaaagttagtggccccagatccttacaaccatcacagtggggaatgttgtgtcct
tcagatacaccagaaggagaggcgtgtggtttggtgaagaatcttgcattgatgactcac
attacaacagatcatgatgaggctcccatcaccagactggcatttaaccttggtgttgag
gacatacagttactgagtggggcagaaatcaccagcaagtttgtttatatggtcttcctt
aatggtaatattctgggagtgatacgaaactataagcgacttgtatacactttccggctg
atgagaagggcaggatacattaatgagtttgtgtccatatgtccaaaccattcacataga
tgtgtgtatatttcatctgatgctggaagagtatgtagaccttatataatagtcagcaaa
gggaaaccattggtgacaaccaagcatatacaagagttatctcaaggctttagatgtttt
gaagattttctgaaagaaggtctggtagaatatctagacgtaaatgaagaaaatgattgc
atgatttcactgtatgagaaagaaattaatcagaacacaacacatcttgagattgaacca
tttaccatactgggtgtatgtgcgggcttgatcccatacccacatcacaaccagtctccg
aggaacacttaccaatgtgctatgggtaaacaagccatgggtacaataggttacaaccaa
agaaacaggatagacacattaatgtatctgctgtgttacccacaagctccactagtcaag
tccaagacaatagaactgatcaattttgacaagttacccgcaggtcagaatgctacagtg
gcagtgatgtcttacagtggatatgatattgaagatgcacttgttattaataaagcatca
cttgatagaggttttggtagatgtctggtatatagaaagcagcaatgtaccctgaagcgc
tatgccaaccagacatttgacaaagttatgggacccatggttgatgctacaacacgcaaa
ccagtgtggcgacattcagcccttgactctgatggaatttgtgcaccaggtgagaagata
gagaataagcaggtgtttgtgaacaagtggatgcccacagtgactaacagtcctcttagt
tctacagaccaggataaacaaccagactatagggaagttcctatatcgtataaaggacca
gagccgtcatacatagaaaaagtgttaatctcatccaatcctgaggaagcattccttgtc
aagatgttgctacggcaaactagacgtccagagataggagacaaattcagtagcagacac
ggacagaaaggagtgtgtgggttgatagttccacaagctgatatgcctttttcagatctg
ggtatctgtccagatattattatgaatccccatggttacccgtctcgtatgacagttgga
aaattgatggaactgcttggtagtaaagctggcgtattagatggaaaatttcactatgga
actgcatttggaggagacaaggttgtggatctctctgcagatctgataagacatggattt
aactatcttggtaaagactatgtcacttccggaataacaggagaaccactctctgcttat
atttattttgggcctatctactaccaaaagttgaagcacatggttttagacaaaatgcat
gcacgtgcaaagggtccacgtgcagtattgaccagacagcctacagagggtagatcacgt
gatggaggccttcgtctaggagaaatggagagagattgtcttattggatatggtgctagc
atgctgttgttagagcgtctgatgatatcaagtgatgcctttgaagtggatgtttgtgaa
caatgtggtcttctgggatatctaggatggtgccagtattgcaagtcatctaagaatgtt
tctactctaaagatgccatatgcctgtaaactgttatttcaagaacttctgtccatgaac
attgtacccaggttatctctgaaaagatacaatgaagtttag
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