Mercenaria mercenaria (northern quahog): 123551917
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Entry
123551917 CDS
T07835
Name
(RefSeq) tuftelin-interacting protein 11-like
KO
K13103
tuftelin-interacting protein 11
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmer03041
]
123551917
Spliceosome [BR:
mmer03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
123551917
Other components
Complex C specific factors
123551917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
CagS
Motif
Other DBs
NCBI-GeneID:
123551917
NCBI-ProteinID:
XP_053397449
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All DBs
Position
4:complement(62352264..62393569)
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AA seq
816 aa
AA seq
DB search
MSSPEVENFEITDDDVYNSFNLRQGRRQTKNQATYGMWADNDSDDERPGFGGGKKKSDFT
APIGFVSGGIKQGDKTFKPGEEEVDDDENDADFDIGDIARLSYKGKKKSKDQGYRRGVSG
TAPTNKGDIGDWEKHTKGLGMKLMQKMGFEVGKGLGKNKQGITTPVEAVKRKGQKAGIAF
HGSERSDRSLIDFPVQDQEAQEAKEFKEQLSQWRKEPEGKKKKIKYVYKTAQEAIEIGSS
KKKGVKSQMSNVKVIDMTGKEKKVLTGYHTISNRHDRPDDDDDDIPVIQEKSTTTAFSMP
ELTHNLNLLVDMSEEDIVQNDRKLRHEKDLIVNMKYEKERLDTVLEQEEKQIERLAKVLE
IIGTCNERTNPGCSNPVTLDECLAIFRILQNEFYTEYKMYELETLAIALVFPIMREHFKN
WNPLADKEYGLSVIKEWQYILGDPNHVYVKDQNNMDVYQRLIWDIWLPHVRTAILKWSCR
QCDPVIELLETWMPLLPTWVMENILDQLVLPRLMQEVENWNPLTDTMPIHAWLHPWLPLM
GDKLEPLYAPIRHKLGNALTNWHPSDSSAKVILKPWQGVFREGHMEVFLRKNILPKLEMC
LQEFPINPHQQTLEPLHWVLAWTELISLRYMVPLFEKCFFSRWLQVLCTWLGNMPNYDEV
TKWYLGWKSVFTEQYLTHPVIKEMFTKALDMMNRAVSGHFQPGVKENMAYFTHTERRNIA
EPNTSRSSSPSVGGPLEPSLKSTSSTYPASFRELVERKAEENNLVFIPIPGKTHEAKQVY
RCGRVSMYFDRSVVFMMDESNQFIPVSLQKLIETAK
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctccagaggtggaaaactttgaaataacagatgatgatgtgtacaattcattc
aatttgcgacagggacgcagacagacaaaaaatcaggctacatatggtatgtgggcagac
aatgacagtgatgatgagagaccaggtttcggtggagggaagaaaaaatctgattttaca
gctccaattggctttgtcagtggtggaataaaacaaggagataaaactttcaaaccggga
gaagaggaagttgatgatgatgaaaatgatgctgactttgatattggagatattgccagg
ttaagttataaagggaagaagaagtcaaaagatcaggggtacaggcgaggtgtgtcaggg
acagctcctactaacaagggagacataggtgactgggaaaaacatacaaaggggctcgga
atgaagctgatgcagaagatgggttttgaagtaggtaaaggcttgggtaaaaacaaacag
ggtatcacaacaccagtggaagcagtgaagcgtaaaggtcagaaagctggtattgccttc
catggttcagagagatcggataggtcattgatagattttccagtacaggatcaggaggca
caggaggcaaaagagttcaaggagcagctgtcacagtggagaaaagaaccagagggtaaa
aagaagaagataaagtatgtatataagacagcacaagaagccattgaaattgggagcagt
aagaagaaaggggtcaaaagtcagatgtcaaatgtcaaggttattgacatgactggtaaa
gagaagaaagtactgacaggttaccatactatatcaaatcgtcacgatcgaccagatgat
gatgatgatgacataccagtgatacaggagaagtcgacaaccacggcattcagtatgccc
gaactgacacacaacctcaacctacttgttgatatgtcagaggaagatattgtacagaat
gataggaagttacgccatgagaaggatctgatcgtgaacatgaagtatgagaaggaaagg
cttgatactgtcctagagcaagaggaaaaacagatagaacgtcttgctaaagtgttggag
attattggaacatgtaatgagagaacaaatcctggatgctctaacccagtgactttggac
gaatgtttggcaatatttcgaatactgcagaatgaattctatacagagtacaagatgtat
gaactggaaacccttgctattgcccttgttttccctattatgagagaacacttcaagaac
tggaatcccctggcagacaaggagtacggactgtcagtgattaaagaatggcagtatatt
ttgggagatccgaaccatgtatatgtcaaggatcagaacaatatggatgtgtaccagaga
ctgatctgggatatatggcttcctcatgtcagaactgctatactgaaatggagttgcaga
caatgtgatccagtgatagagttgttggagacatggatgccattgttaccaacttgggtg
atggagaacatactagaccagcttgtgttaccacggttgatgcaggaggtcgaaaactgg
aacccactcacagacaccatgcctatacatgcctggctacacccttggttacctctcatg
ggagataaacttgagccactctatgcccctatcagacacaaactgggaaatgctctcaca
aactggcatccttcagacagttcagccaaggtgatcttgaagccgtggcagggtgtattc
cgagagggtcacatggaggtgttcctgaggaaaaacatcttacctaaactagaaatgtgt
ctgcaggagttccctatcaacccacatcaacaaactcttgaacccttgcattgggtgtta
gcctggacagaattgatatcactacgctacatggttccattatttgagaagtgtttcttt
tctcgctggctacaagtgctctgtacctggcttggcaacatgccaaactacgacgaggta
accaagtggtacctgggctggaaatcagtgttcacagagcagtacctcacacatcctgtc
attaaagagatgtttacgaaggctcttgatatgatgaatcgtgcagtgtctggccatttc
caaccaggcgtgaaggaaaatatggcgtatttcactcacacagaacgaagaaatatagca
gaaccaaatacatcacgatccagttctccatctgtagggggaccactagagccaagttta
aaaagtacatcatcaacttacccagccagtttcagggaacttgttgaaagaaaggctgaa
gagaacaaccttgtatttatcccaattcctgggaagacacatgaagccaaacaagtgtac
cggtgtgggagagtgagcatgtattttgaccggagtgtggtgtttatgatggatgaaagc
aaccagtttattcctgtctctttacagaagttaattgaaacagcgaaatga
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