Mercenaria mercenaria (northern quahog): 123551964
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Entry
123551964 CDS
T07835
Name
(RefSeq) transcription initiation factor IIB-like isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123551964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmer03021
]
123551964
Transcription machinery [BR:
mmer03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
123551964
Prokaryotic type
Archaeal type
TFB
123551964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
BRF2-like_C_cyclin_rpt
RB_B
Sigma70_r4
Cyclin_C
ORC6
Trm112p
Motif
Other DBs
NCBI-GeneID:
123551964
NCBI-ProteinID:
XP_045197229
LinkDB
All DBs
Position
15:complement(40683366..40693715)
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AA seq
318 aa
AA seq
DB search
MITCRMPHDLRGAQIACPEHPDTPLVEDYHAGDLICPECGLVVGDRVVDVGTEWRTFSNE
KSNKDPSRVGAAENPLLEGGDLSTMIALDPKDTQMDEFGKPMYRNRRTMNSADRALLNAF
REITQMGDRLNLPKMVADRASTLFKQVNDTKSLKGRSNDAVCSACMYIACRQEGVPRTFK
EICAVSKVSKKEIGRVFKLILKTLETNVELITTGDFMSRFCSNLSLSSKIQKAATHIARK
AVDMYLVPGRSPVSVAAAAIYMASQASEDKKTQKEIGDIAGVAEVTIRQAYKLMYPKAHE
LFPEDFKFATPIEQLPTQ
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgattacatgtaggatgccacacgatttaagaggagcacagatagcatgtccagagcat
ccagacacacctcttgtagaagattatcatgcaggtgacttgatatgcccagagtgtggg
cttgttgtaggggacagagtagtagacgttggaacagaatggagaacattcagtaatgag
aaaagtaacaaagatccttcaagagttggtgctgcagagaatccattgttagaaggtgga
gatttatcaacaatgattgcattggatccaaaagatacacaaatggatgaatttggtaaa
cctatgtacagaaacagacgtacaatgaacagtgcagacagagcattacttaacgcattc
cgagaaatcacacagatgggtgacagattgaatctacctaaaatggtggcagatagagca
agcacactatttaaacaagtaaatgacacaaagtctttgaagggacgaagtaatgatgca
gtttgttcagcatgtatgtacatagcctgtagacaggaaggggtacctagaacatttaaa
gaaatttgtgctgtatcaaaagtgtccaagaaggaaattggtagagttttcaaattgatt
ttgaagacacttgaaacgaatgtagagcttatcacaacaggagattttatgtcaagattc
tgttcaaatttgagcttatcatcaaagatacagaaagctgcaacacacattgcacggaaa
gctgtggacatgtatttggtaccagggagaagtccagtatctgtagctgcagcagctata
tatatggcctcacaagcttcagaagataagaaaacgcaaaaagaaataggagatattgca
ggcgttgcagaggtcactataaggcaggcgtacaaattgatgtatccgaaagcgcatgaa
ctatttcctgaggacttcaagtttgcaacacctatagaacagcttccgacacagtga
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