Mercenaria mercenaria (northern quahog): 123552003
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Entry
123552003 CDS
T07835
Name
(RefSeq) nucleoporin Nup43-like
KO
K14305
nuclear pore complex protein Nup43
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123552003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123552003
03036 Chromosome and associated proteins [BR:
mmer03036
]
123552003
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123552003
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
123552003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_HPS5
MIOS_WD40
WD_LRWD1
WDR90_beta-prop_4th
WD40_CFAP43
Motif
Other DBs
NCBI-GeneID:
123552003
NCBI-ProteinID:
XP_045197287
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Position
4:67383689..67399358
Genome browser
AA seq
383 aa
AA seq
DB search
MDDSPPIVKFVSQKISKIRWKPNQNQYSHETDVFATGNWDDEAGKVCLWKLPSMEQEVMD
MEAGGYDPAVREPNLLCEVPHTGDVTDLEFISADHVVSSSSTGTVTLYRHHTNSQTLGAS
MSWEGIHKDPGDKGCPCTCLTTQGEDMVVSAGEDGRINVLNVAYRKPVRVIDKANSCTIN
GITFLKQLEVISVDSSGQLKVFDLRQASGDPVRTFALSGEQTPLQCVARHPTQYHIVATG
AYDGVLSVWDLRQEKFPVTPLEAHSAAIWEVKFHPNNPDHLFTCSEDGSVWHWNASSVAS
LVTGTGAGSGGGSLFSQNTPTGGAGNMSITSPWLVLDSGRQKLDVKSKLSLTLPLNTIDI
VSQILLCGSDEEAIYAMDIPGIR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggacgactctccaccgattgtaaaatttgtatcacagaaaatttcaaaaatccgatgg
aaaccaaatcaaaatcagtactcacacgaaacagatgttttcgccacaggaaactgggat
gacgaggctggaaaggtatgtttatggaaactgccatctatggaacaagaggtcatggac
atggaggctggaggctatgatccagctgttagagagccaaatcttctctgtgaggtgcca
catacaggagatgttacagatcttgagtttatcagtgcagatcatgttgtgtcctcatca
tctactggaacagttacactctacagacatcacacaaactcacagacacttggtgcttca
atgagttgggaaggtatacacaaggacccaggagataaaggatgcccttgtacttgttta
acaactcagggtgaagatatggttgtatcagcaggagaagatggtcgcataaatgttcta
aatgttgcatacagaaaacctgtcagagtgatagataaagccaacagttgcactataaat
gggatcacatttttaaagcagttagaagtgatttctgtagattccagtgggcagctgaaa
gtgtttgatctccgacaagcatctggtgacccggtcagaacttttgcactatctggtgaa
cagacacctctgcagtgtgtagcaagacatcctacccaatatcatatagttgctacaggg
gcgtacgatggtgtgttatctgtgtgggacctcaggcaggaaaaattcccagtcacacct
ctagaggctcattctgcagcaatttgggaggtgaagttccacccgaacaatcctgaccat
ttgttcacatgttccgaggacggctccgtctggcactggaatgcctcatcagtagcatca
ttagtcacaggaactggagcaggctctggaggaggttccctattctcacagaatacacca
actggcggtgctggcaacatgagtataaccagtccctggctcgtactggactccggcaga
cagaaacttgatgtgaaatcaaaattaagcctgacattgccattaaatacaatagacata
gtgtcacagattttactgtgtggctcggatgaggaggcgatttatgctatggatatacct
ggcataagatag
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