Mercenaria mercenaria (northern quahog): 123552121
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Entry
123552121 CDS
T07835
Name
(RefSeq) general transcription factor IIE subunit 1-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123552121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmer03021
]
123552121
Transcription machinery [BR:
mmer03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
123552121
Prokaryotic type
Archaeal type
TFE
123552121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Cas12f1-like_TNB
CcmH
Zf-C2H2_ZNF451_C
A24_N_bact
C1_1
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
123552121
NCBI-ProteinID:
XP_053397649
LinkDB
All DBs
Position
4:72353980..72366277
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AA seq
407 aa
AA seq
DB search
MDAEVLTEVPQSMKRLVRLVARGFYSIEHALVIDMLVRNPCMKEDDMLELLKFDRKQLRA
VINTLKSEKFIKVRMRVETDAEGRTTRHNYYFISYVMFVNIVKYKLDHVRRKIEMEERDN
TSRASFRCDDCQKTFTDLEADQLFDFLSQTFKCTMCQNEVIEDESAINKTDARTLLAKFN
EQIQPLYDLLRECEDVRLAPELLEPEPTDIRSSQRPKNTKAASTDKWSGDATKYTTQFGY
TDTSISVSMNEGQKKEKEAPKQQPIWMKKSTVDGVPMDTTNEVTAEDNIISRKDQDNRPD
VNREIENLLMIHEKKTNMSVPAMIPGVGNAEESDSSDSDAETAQPTGMSAEVAEDESEAE
EEVVMVTVAGTKVPLSDVTDEMVARMSLEEKADYIRLGQEMYQDMYE
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgaagttctgacagaagttccgcagagcatgaagaggctggtgcgtcttgtg
gcacgtggtttttattccatagaacatgccttagtgatagacatgcttgtgagaaatcca
tgcatgaaagaggatgatatgctagaattattgaagtttgacagaaaacaacttcgagca
gtgataaatacgctgaaaagtgaaaaattcatcaaagttagaatgagagtagaaacagat
gctgagggtcggactacaaggcataattattattttattagttatgttatgtttgtaaat
attgtgaaatataaactggaccatgtgcggcggaaaattgagatggaagaacgagataac
accagtcgggcatcatttagatgtgacgattgccagaaaacatttacagatctcgaagcg
gaccagctgtttgacttcttatctcagacattcaagtgtacaatgtgtcaaaatgaagtg
atagaagatgaaagtgcaataaataagacagacgcacggacgttacttgccaagttcaat
gagcagatacagccactgtatgacctgttgagagaatgtgaagatgtgaggttagcacca
gaactcttggagccggaacccacagatatcagatcttcacaaagaccaaaaaacacaaaa
gcagcatctacagacaaatggagtggggatgccacaaaatatacgacacagtttggttat
acagatacatctattagtgtgtctatgaatgaaggacagaagaaagagaaagaagcacca
aaacaacaacctatctggatgaagaagagcactgttgatggtgttcccatggataccaca
aatgaggttactgctgaagataatataatatcaagaaaggaccaggataatcgacccgat
gtgaatcgcgagattgagaatctgttgatgatacatgagaaaaagaccaatatgagtgta
cctgcaatgattccaggcgtaggaaatgctgaggagagcgacagcagtgacagtgatgca
gaaacagcacagccaacagggatgtctgcagaagttgcggaggatgaaagtgaggctgaa
gaagaggttgtcatggtaacagtagcaggaactaaagtaccattgtcagatgtcacagac
gagatggtagcaagaatgtctctagaggagaaggcagattatatcaggctaggtcaggaa
atgtaccaggatatgtacgaatga
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