Mercenaria mercenaria (northern quahog): 123552273
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Entry
123552273 CDS
T07835
Name
(RefSeq) uncharacterized protein LOC123552273 isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmer03041
]
123552273
03009 Ribosome biogenesis [BR:
mmer03009
]
123552273
Enzymes [BR:
mmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123552273
Spliceosome [BR:
mmer03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123552273
Ribosome biogenesis [BR:
mmer03009
]
Eukaryotic type
90S particles
Helicases
123552273
Pre-60S particles
123552273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
123552273
NCBI-ProteinID:
XP_053397742
LinkDB
All DBs
Position
4:80323358..80412755
Genome browser
AA seq
721 aa
AA seq
DB search
MGDKMTEKRLKKKMKMKLKKEKLLKRNQEKQTENSLGPSHSEVPFRSQLEAKQIQKQKKK
MIQGDTAVTNENKLAQDQKKKKKKRKLEEVKAVAEDVSKKKMKLEKTKPDSSEDSDDDSD
TEPAGHSKKLKQGNRKAVTNDSKKMTDDIDDESSDENSENESDEVDDSGVKDEMESDDSE
KDSDGEIEEEEADEEESTDIKPPEEQTLPGSSLGVGIVTDKSFKSLEGRVCANTLDGIKD
MGFTHMTEIQANAIPHLLEGRDLMGAAKTGSGKTLAFLLPAVELLYNLKFMPRNGTGVIV
ISPTRELSMQTFGVLKELLKYHCHTYGLIMGGTNRQEEAKKLGKGVNILVATPGRLLDHL
QNTQDFMYKNLQCLIIDEADRILDVGFEEEMKQIIKLLPKRRQTMLFSATQTRKVEDLAR
ISLKKEPLYVGVDDKKDQATVEGLEQGYVVCPSEKRFLLLFTFLKKNRKKKMMVFLSSCM
AVKYYHELLNYIDLPVMCIHGKQKQTKRTQTFFQFCNAKEAILLCTDVAARGLDIPAVDW
IVQVDPPDDPKEYIHRVGRTARGEGGVGHALLILRPEELGFLRFLKQAKVPLNEFEFSWS
KISDIQLQLEKLIEKNYFLNRSAHEGYKSYVRAYASHSLKNIFDVNTLDLQKVALSFGFK
TPPFVDLNVHGSKGGGGGARNKQGRGGGGFGYQRSKHQFKSKVFKQFSGNKKSGGKRQFS
R
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacaaaatgacagagaagcgtcttaagaagaagatgaagatgaaattgaaaaaa
gaaaagttgttgaaaagaaatcaagaaaaacaaacagaaaacagcttaggaccatcacat
tctgaggtgccattcaggtcacagttagaggctaagcagatacagaaacagaagaaaaag
atgatccagggagatacagctgtgacaaatgaaaacaaacttgcacaagatcaaaagaaa
aagaagaagaaaagaaaattggaggaggttaaagcagttgctgaggatgtcagtaaaaag
aaaatgaaattagaaaagacaaaacctgacagttccgaggacagtgacgatgatagtgat
acagaaccagcaggtcattctaaaaaactgaagcaaggaaataggaaggcagtgactaat
gattcaaagaaaatgactgatgatattgatgatgaatctagtgatgaaaacagtgaaaat
gaaagtgatgaagttgatgactcaggtgttaaggatgagatggagagtgatgattcagag
aaagacagtgatggtgagatagaagaagaagaggcagatgaagaggagagcactgatata
aaacctccagaggagcagacattgccagggagttcactaggtgttggtatagttacagac
aagtccttcaagagccttgagggtcgggtatgcgctaacacattagatggtatcaaggat
atgggattcacacatatgacagaaatacaggccaatgctataccacatcttcttgaagga
agggatttgatgggagcagcaaagactggtagtggtaaaaccctcgccttcctcttgcca
gctgttgaacttctatataatctcaagtttatgcccagaaatggtactggtgtaatagtt
atatcaccaactcgagagctgtccatgcagacatttggagtattaaaggagttactgaaa
tatcactgtcacacatatggcctcattatgggcgggaccaacagacaggaggaggcaaaa
aagcttgggaaaggcgtgaatatattagtagctacacctggtaggcttctagatcattta
cagaatactcaggatttcatgtacaagaatctacagtgtctgataatagatgaggctgac
cgtatactggacgtcgggtttgaggaggaaatgaaacaaattatcaaacttttgccaaag
agacgccagacaatgttgttttctgctacccagactagaaaagttgaagatttagcaaga
atatcgctgaagaaagagcctctgtatgttggggtagatgacaagaaagatcaggcaaca
gtagaaggtttagaacagggctatgtagtgtgtccatctgagaagcgtttcctactgttg
tttacgttcctcaagaagaatcgtaagaagaagatgatggtgtttttgagctcctgtatg
gccgtcaaatattaccacgagttgttgaactatatagatctacctgtgatgtgtatacat
ggtaaacagaagcagacaaaaagaacacaaacatttttccagttttgtaacgcaaaagaa
gcaatattgttatgtacagatgtggcagcaagagggttagatatacctgctgttgattgg
atagtacaagttgacccaccagatgaccctaaggaatatattcatcgtgtgggcaggaca
gcaagaggggaaggtggagtaggtcacgccttgttgatattgcggccagaggaattggga
tttctccgcttcttgaaacaagccaaagtccctctcaatgaatttgaattctcatggagt
aaaatttctgacatacagcttcagcttgaaaagttgatagagaagaactacttcctgaac
agatccgcccacgagggctacaagtcatacgttcgagcctatgcctctcatagtttgaag
aacatatttgatgtaaacacgttagatctccagaaagtggctttgtcatttggcttcaag
acacctccctttgttgatctgaatgtgcatggtagtaaaggtggtggtggtggagccagg
aacaagcaaggacgtggaggtggaggatttgggtaccagcgtagtaaacatcagttcaag
tcaaaggttttcaagcagttcagcgggaacaagaaatcagggggcaagaggcagttttca
cggtga
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