Mercenaria mercenaria (northern quahog): 123552286
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Entry
123552286 CDS
T07835
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03013
Nucleocytoplasmic transport
mmer03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123552286
03015 mRNA surveillance pathway
123552286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123552286
03041 Spliceosome [BR:
mmer03041
]
123552286
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123552286
Spliceosome [BR:
mmer03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
123552286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
123552286
NCBI-ProteinID:
XP_045197764
LinkDB
All DBs
Position
4:81559629..81603178
Genome browser
AA seq
982 aa
AA seq
DB search
MSDAGFFKGTSADQDNRFADKKKKLMKQMKFAENIETRVDLSKVNVDTMKPWIATRITEL
LGMEDDVIIEFVYNQLDNRYPDPKEMQINLTGFLNAKNARVFMGELWELLCSAQENIGGI
PAKFVEQKKEEIKKRQAEQERIQQSLKVSEEQIRNAIMKEREEAERRERKSSSPRNRRDR
SRSPRRKKREKSSSRSPRKDSEKSGDKSADKTAEKSDDKTDSKTVVDGHTPVPLVPLEVK
EDAKDSDEPKENGEKAPVTTNGETEEKSASDKGDNEEKDEKEKDEKKETDGKSGKSRNRS
RSRSRDRRRRSRSRSGDRRRDDRDRDRDRKYSRRSRSRSPRRRSPPRRSPPRRRSRSRDR
DRRRSPPRSRTRRSPSPRRRSPSPRRRYSPPRRQRSPSPRRRREPSRERERERKRSPPQP
PKRKARSPSSSDSDSDSSDSDGPAAKRPPNTRKPMMDESDEGEDGGKVGIQQRRTYRRQR
EEPEDSDSSSSSSSSSDDEAPPPPARRRERDERRLPSPRRDDRYRRYPSPPRYRDDRDRF
RDERERYERERFRDDRDRFRDDRDRYVDPRRQRSPPRRRSPRGSFEEDVRRRRDSPPRRE
RRRSSPSPQKRRFIESPPDERRRRRNEVESPPPEKQRRRRRETESDEEMQQQLRRKRRES
PEPERRKTKRVPVKEESSSDEDSSPERPPGKQKSRRRDSSSESPEPRKPSRKQKLPPPRK
KAEADSDSSSDENDSQEIRKVKKEPYSPMNEHRSKVKTVSDSPKRKPSPAARKSASKREL
SEQLLSRKRNSSSEREDSSPDIRRRRKSSTNSPERREVVVKRSRESESSLKRKKEPSSSP
HERRPKKSRSFSEGSDHGGEKHMEDSDEYRRVVVMRSESREERAVHQTSREDAGKHKKPA
ANSDSGQSGSDDGKKKKKKKEKKHKKHKKHKKHKQKKEVVESDSEGGQTGDGEELEKTLR
EKALQSMKQRVSRESPPDDSSD
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgcagggtttttcaaggggacaagtgctgatcaagacaacagatttgctgac
aagaaaaagaagctaatgaagcaaatgaaatttgctgagaatattgagacaagggttgac
ttgtcaaaagttaatgttgacacaatgaaaccatggatagctacaagaatcacagaatta
cttggaatggaagacgatgttattatagagtttgtttataatcagctagacaataggtac
cctgacccaaaggagatgcagataaatttgactggttttttaaatgcaaagaatgctcgt
gtgtttatgggtgaattgtgggagttgttgtgtagtgctcaagaaaatattggtggaatt
ccggcgaagtttgtggaacagaaaaaggaagaaataaaaaagagacaggcagagcaggag
agaattcaacagagtttgaaagtatctgaggaacaaattaggaatgccattatgaaggaa
agagaagaggcagagagaagggagcgtaaaagttcatctccaagaaacagacgagacaga
tctaggtcgccaagacgtaaaaaacgtgaaaaaagttcatcaagatctccaaggaaagat
tcagaaaagtctggagacaaatcagctgacaaaacagctgagaaatctgacgataaaaca
gactctaaaacagttgtagatggtcacacaccagttccgttagtgccattagaggttaaa
gaagatgcaaaagattcagatgaacctaaagaaaacggtgaaaaagcacctgttactaca
aatggtgaaactgaagaaaaatctgcatcagacaaaggggataatgaagaaaaagatgaa
aaggaaaaagatgagaaaaaagagactgatggaaaaagtgggaaaagtcgcaatagatct
aggtcaaggtcacgagataggaggagaaggagtaggtcaaggtcaggagataggaggaga
gatgacagagatcgagatagagacagaaaatatagccgaagatcaagatccagatctccg
aggcgtcgatctcctcctagaagatcaccacccagaagaagatcaaggtcacgagacagg
gatagaaggaggtcaccaccaaggtcacgtacacgtagaagtcctagtccaaggagacgt
tcaccatcaccaagaagaagatactcccctccacgtagacagagatctccatcaccaagg
agacgaagggaacctagtagagaaagagagagggagaggaagagatcacccccacagcct
cctaaaagaaaagcgaggtctccaagtagttcagacagtgattctgatagctcagattct
gacggtccagctgcaaagagacctccaaatactagaaagccaatgatggatgagagtgat
gaaggagaagatggtggtaaagtcggaatccagcagagacgtacatacaggaggcaaaga
gaggaaccagaggactctgactcgtccagttcttcatcatcctcatcagacgatgaggca
ccgccacctccagcaagacgtcgtgagcgagatgagagacggctaccttcaccaagacga
gatgacaggtaccgcagatatccatctccacccagatacagggatgatcgtgatcgtttt
agggatgaacgagagaggtatgagagagagagattccgagatgatagagaccgattcaga
gatgatcgagacagatatgttgatcctaggagacagaggagtccaccaagacgaaggtct
ccaagaggctcatttgaggaagatgttagacgaaggagagatagtcctcctaggagggag
cgtcgtagatcttccccatctcctcaaaaacgtagatttatagagagtcctccagatgag
agacgaagacgtaggaatgaagtagagtcacctccaccagaaaaacaaagaagacgcaga
cgagaaactgagtcagatgaagaaatgcagcaacagttacgtagaaagagaagagaatca
ccagagcctgaacggcgaaaaacaaaacgagtcccagtgaaagaagaatcttcatcagat
gaagattcttctcctgagagacccccaggtaaacagaaatccagacgacgggactcaagt
tcagagtccccagaaccaagaaaaccatcccgtaaacaaaagttaccgccccctagaaaa
aaagctgaagctgatagtgacagctctagtgatgaaaatgattcccaggaaattagaaag
gtgaaaaaagaaccttattcacctatgaatgaacatagaagcaaagtaaaaactgtgtcc
gattccccaaaaaggaaaccatctccggcagctagaaaatccgcatcaaaacgtgaactt
tctgagcagctcttgtctagaaagagaaattctagtagtgaaagggaggacagctcacct
gatattcgtcgtcgtaggaagagttcaactaattctccagagcgtagagaagtagttgtg
aaaagatcaagggaaagcgaaagctccctaaaacgtaaaaaggaaccttcatctagtcct
catgaaagaagaccaaagaaatctaggtcattctctgaaggttcagatcatggaggtgaa
aaacatatggaagattcagatgagtacagaagagttgtagtgatgaggtcagaaagtaga
gaggaacgtgcagttcatcagacatctagggaagatgcagggaaacacaagaaaccagca
gcaaactctgattcagggcagtctggctcagatgatggcaagaaaaagaagaaaaagaaa
gaaaagaagcacaagaaacataaaaagcacaagaaacataagcagaagaaagaagtagtg
gagtcggatagtgagggtggccaaacaggagatggtgaagaactggagaagaccctcaga
gagaaagccctgcaatcaatgaaacaacgggtgtccagggaaagcccgccagatgactcc
tcagattaa
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