Mercenaria mercenaria (northern quahog): 123552485
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Entry
123552485 CDS
T07835
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmer03009
]
123552485
Enzymes [BR:
mmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123552485
Ribosome biogenesis [BR:
mmer03009
]
Eukaryotic type
90S particles
Helicases
123552485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Ca_bind_SSO6904
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
123552485
NCBI-ProteinID:
XP_045198126
LinkDB
All DBs
Position
4:95594652..95624363
Genome browser
AA seq
977 aa
AA seq
DB search
MNFKPKKKDQFKGHKGKVFRKQLYGSKKTNREIIDEEIEHLQEKLNEFETSESNSFTDFP
LSKRTLKGLSACSYEKPTDIQRESIGLALNGNDILGAAKTGSGKTLAFIIPVLECLYKLK
WSNFDGLGALIFSPTRELAFQTFEVLKKVGKFHDFSAGLVIGGKPLKEEAGRINRTNIVV
CTPGRLLQHMDETTYFSADNLKILVLDEADRILDLGFAQTMNAVIENLPAERQTLLFSAT
QTRSVKDLARLSLQDPMYVSVHENATESTPAQLGQNYVVCELHDKLNLLWSFLKNHLKSK
ILVFLTSCKQVKYIHEAMRHLKPGIPIFALHGGMPQLRRVEVYNQFMWKQRVCLFATDIA
ARGLDFPAVNWVVQLDCPEDANTYIHRAGRTARYEKDGESLLVLLPSEEENMIKQLSDKK
IPIEKIRVNQQKLYSIQPKLEANCAADQELKASAQRAFVTYLRSVFLMKNKKVFDVHALD
IEKYARSLGLAIAPKVRFLKKDQKRKEEMESKKTKPAVDLSKLKKQESSSDDSDSGNSSD
SGDSDSDDDDDDDENENNNSDDDSSGNDSKTGYKSDDELSSNTEKEDLYTKSPETSAVAK
SEVVLKSEKERTKTDKSKKVEESTKLKENSKPSKVKGNLPNNDKDSSSSESENSDGDNSD
SEDDENMEESDESSDSEDSGEESDDENESEAISELEDKRKKKIDMDIDFQFNVDEMEDDE
LFKVKRNVDIDDVLGDKVMETEPEESKSKKRRKALKQNKELQALKLWRKNIKVNTKVTFD
EEGQVEVDPHKTPQVDLDIERPDNIGGIDIEKARERMQAEDAIDKQIYREKIKQKHREQR
LKRKEENRAQKQRGNKKEDEEEEEMEARLPSGDDDDDRPDPLSFLPDPDKVYGSEQSESD
SGSDGPSVSKRAKLSNQSKKAQSKMGQSNQSSSEEGDSGDSDDAVSYSDNSDSDNVMDTE
LTLQDDEEIALRLLQGK
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcaagccaaagaaaaaagaccaatttaaaggccataaaggcaaggtttttcga
aagcagttgtatggctctaaaaagactaacagagagattattgacgaagagattgaacat
cttcaggagaagttaaacgagtttgagacatctgagagtaacagttttactgattttcct
ttatcaaagagaacattaaaaggtttgtcagcatgcagttacgagaagccaacagacatt
cagcgagagtcaataggtctggccttaaatggtaatgatattcttggtgctgcaaagact
ggatccggaaaaaccttggccttcattataccagttttggagtgcctatacaagctgaaa
tggtccaactttgatggcctaggtgctctcattttttctcccacaagggaactggccttc
cagacgtttgaggtgctgaaaaaagttggcaaatttcatgatttttcagcaggtctggtc
atcggaggaaagccattgaaggaagaagctggtagaatcaaccgtacaaacattgtagta
tgtactcctggcagattgttacaacatatggacgaaactacatacttttcagcagataat
cttaaaatacttgttcttgatgaagctgatcggatactggaccttggttttgcacagact
atgaatgctgtcatagagaaccttcctgcagagcgacaaactttgctcttctctgcaaca
cagactaggtcagtaaaggatctagcccgactcagtttacaggatcctatgtatgtgtca
gtacatgagaatgctactgaaagtacaccagcacagttaggacagaattatgttgtgtgt
gaactgcatgacaaactcaacttgctgtggtcatttcttaaaaatcacctcaagtcaaag
atactggtattccttacaagttgcaaacaggtgaagtatatacatgaggcaatgcgtcat
ttaaagcctggaatcccgatatttgcactacatgggggtatgccccaactgcgacgtgtg
gaagtctataatcagttcatgtggaaacagagggtctgtctgtttgctactgatatagca
gccagagggcttgactttcctgctgtgaattgggttgtccagttagactgtcctgaggat
gccaacacgtacatacatcgtgctggtcgtacagcgaggtacgagaaggatggagagtca
ttgctcgtgttgttgccatcagaggaagaaaatatgattaaacagttgtcagataagaag
atacctatcgaaaaaatcagagtgaatcaacagaagttgtacagtattcaaccaaaattg
gaggcaaattgtgctgcagatcaggaacttaaggcatctgctcaaagggcatttgtgaca
tatttacggtctgtattcctgatgaaaaacaagaaagtatttgatgtgcatgcccttgat
attgaaaaatatgcaagatcattaggactagccattgcaccaaaagtaagatttttgaaa
aaagatcagaagagaaaagaggaaatggaatctaagaaaacaaaacctgcagtggattta
tcaaaacttaagaaacaggaatctagtagtgatgatagtgatagtggtaattcaagtgat
agtggtgatagtgatagtgatgatgatgatgatgatgatgaaaatgaaaacaacaatagt
gatgatgacagcagtggtaatgacagtaagacaggttacaaaagtgatgatgaactatct
agcaatacagaaaaggaagatttatatacaaaatcaccagagacttcagcagtagcaaaa
tcagaagtagtattaaaatctgagaaagaaagaactaaaacagacaagtcgaaaaaggtt
gaggaaagtacaaagcttaaagaaaattcaaaaccgtctaaagtgaaaggaaatttgcca
aataatgataaagattcatctagttcagaaagtgaaaattctgatggtgataattctgat
agcgaagacgatgaaaatatggaagaatctgatgaaagttctgacagtgaagattctggt
gaggaaagtgatgatgaaaatgagagtgaagccatatcagaactggaagataaaaggaag
aaaaagattgacatggatatagattttcagtttaatgttgatgaaatggaggatgatgaa
ctgtttaaagtgaaaagaaatgttgatatagatgatgtgctaggtgacaaggtcatggag
acagaaccagaggaaagtaaatcaaaaaagagaagaaaagctctgaaacagaacaaggaa
ctacaggcattaaaactttggaggaaaaatatcaaggtcaacaccaaggtcacatttgat
gaagaaggccaggttgaagtagaccctcataaaactcctcaagttgatttggatatagag
agaccagacaatattggtggtatagacatagagaaagcaagagaaagaatgcaagcagag
gatgcaatagacaaacagatctacagagagaagataaaacagaaacacagagagcaacga
ttgaagagaaaagaggaaaacagggctcagaaacagagaggaaataaaaaagaagatgag
gaggaggaggaaatggaagcgagactgccatctggagatgacgatgatgatagaccagat
ccactctcatttttacctgacccagataaagtgtatggcagtgaacagtcagagagtgat
tctggtagtgatggaccatctgtatccaaaagagcaaaattatccaaccagtctaagaag
gcacagtctaagatgggacagtctaatcagtcaagtagtgaggaaggtgattctggtgat
tccgatgacgctgttagttattcagataactcagactctgataatgttatggacactgaa
cttacccttcaggatgatgaagaaatagcattgagattgttgcaggggaagtag
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