Mercenaria mercenaria (northern quahog): 123552533
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Entry
123552533 CDS
T07835
Name
(RefSeq) cleavage stimulation factor subunit 2-like
KO
K14407
cleavage stimulation factor subunit 2
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123552533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123552533
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
123552533
U7-dependent histone pre-mRNA processing factors
123552533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
RRM_7
Motif
Other DBs
NCBI-GeneID:
123552533
NCBI-ProteinID:
XP_045198189
LinkDB
All DBs
Position
4:100024190..100046656
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AA seq
471 aa
AA seq
DB search
MDDLAPISAQERAKRSVFVGNIPYEATEEALKEIFIQAGPVVSFRLVYDRETGKPKGYGF
CEYQDVETAQSALRNLNNTDFNGRPLRVGVAAGESNKDEMAGMQQALGGPILESPYGDPV
EPEKAPEAISKAVASLPPEQMFELMKQMKLCIQNNPTEARNMLLQNPQLAYALLQAQIVM
KIVDPQVAMAMLHRDSSQVPPAGSTAPTPATSQPPVQQAPIVPPQPQTSMPDASMMGGGR
GPGGLMGNVPVSQGPGGPAGMMGGPRGPGMMGGPGPQGMGNRPQLFPIQGMGGPGPQNMG
GPGPQNMGGPGPQNMGGPGPQGMGGPGPQGMGGPGPQGMGGPGPQGMGGPGQGPPQRPDF
GRDPRDPRLMAQGDTRGMPAGPRPVMPPASIASSQGMMQNLMQGGLPNMAGMNPQMLAAG
GGGPGVTSQDQEKAALIMQVLQLTDQQIAMLPPDQRQSILILKEQISKNAT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcttgcaccaatatctgctcaagaaagagctaaacgatcagtatttgttgga
aatattccctatgaagctacagaagaagcattaaaggaaattttcatacaagcaggacct
gtagtcagcttcaggttagtatatgacagagagactggtaaaccaaagggttatggtttc
tgtgagtaccaggatgttgagacagcacagagtgcactacgtaacctcaacaatacagac
ttcaatgggcgccctctacgtgtgggggtagcggctggagaatctaacaaggatgaaatg
gctggtatgcagcaagctcttggtgggccgattcttgaaagtccctatggtgatccagta
gaacctgagaaagctccagaagccatatctaaagctgtggccagtctgccgccagaacag
atgtttgaactcatgaagcagatgaagctgtgtatccagaacaacccgacagaggctcgg
aacatgttgttacagaatccccagttggcatacgcactgttacaggctcagattgtcatg
aaaattgttgaccctcaagttgccatggcgatgttgcacagagatagttctcaggtacca
ccagcaggtagtacagcacctacaccagcaacatcacaaccacctgtacaacaggctccc
attgttccaccacagcctcaaacatcaatgcctgatgcctcaatgatgggtggtgggcgt
ggtccagggggtttgatgggtaatgtgccagtatctcaaggtccaggaggccctgctgga
atgatgggaggcccaagaggtcctggaatgatgggtggcccaggaccgcaaggtatggga
aatagaccacaactgtttcctatacaaggaatgggtggccctggtccacagaacatgggc
ggtccaggcccacaaaacatgggtgggccgggtccacagaacatgggtggtccaggaccc
cagggcatgggtggtcccggccctcagggtatgggtggtcctggtccacagggcatgggt
ggtcctggtccacagggcatgggagggcctggccagggaccaccacagaggccagacttt
ggaagagatcctagggacccaaggttgatggcgcagggtgatacaagaggcatgccagca
ggtcctagaccagtgatgccaccagccagtatagcttcttcacaaggcatgatgcaaaat
ttaatgcagggaggtctgcccaacatggcaggtatgaatcctcagatgctagcagctgga
ggtggaggccctggagtgacatctcaagaccaagaaaaggctgccctgataatgcaggtg
ctacaattaacagaccagcagattgccatgttacctccagaccagaggcagagcattctt
atattaaaggaacagatctcaaaaaatgcaacatga
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