Mercenaria mercenaria (northern quahog): 123552603
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Entry
123552603 CDS
T07835
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1-like isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123552603
Membrane trafficking [BR:
mmer04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
123552603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
RasGAP
DUF5601
MC4
DUF5740
Motif
Other DBs
NCBI-GeneID:
123552603
NCBI-ProteinID:
XP_045198281
LinkDB
All DBs
Position
15:46629918..46678112
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AA seq
1664 aa
AA seq
DB search
MALGLDLAELSKHLRQERLFVTSEREQLQNLYEQVKTSAEQLYHQSWIGRQQKDLLDLLI
RSAQQVTPAQCCSQTNQLESLNFVDGYKHLSYHDSKYGEFMKFLVENPTLLGQILYMADQ
NNIPNVQEMVKVLMHSVFGNCVLQEDETSMLHLLKTLLDLQVAPCDNPRRMLRRGSSAFS
IAFKQLFDIVFSAKLFLTASLHDPVMRLLMEDEWFYDIDPGKALVRFPPQERLRRFGEPG
TDSYKEKLVKYRTTIVDKLVLMASRFITSIKNNMHCFPPSLGWIISQVYQTLAKSGKVEM
GEVRAVCADLVFALFICPAVCDPEPYGITTDVPISHIARHNLMQMAQIIQVLAISQWEEI
DPRLHDLYGKFEKGCMSTLLDSLLDGIGVELPSTNNAQLPCLTRTSSLIQLSHLNSLISF
LKSALPFVEDSTEKKCLDELLSALVLVTPQTAVQNPLAMIGSPSSNTPPGTPVTHKKSKG
KKKMSVASVMTQISHVSDETASMSSMSLDAPEAQPTNQMEDVLVLSLGDDLECPGMMSEQ
KVLSFEQENKRRRVKYQTVQGGYVVGPVEIQEKRTRFSLSHDQESIGNTSDIPEAISEGA
SSHSVGSQDLENDDDNDNFSDMISANVSGRGTPNISGSGRDTPLSQAESEQEVAPHPQPA
LPETVQKKNREDVTEKFGKFEIKELDYDLKSTVSDTWSTDVLASDSEPPEGNQSVRLEEI
AEEMVRQHLLAERVSEISETASDAWSTDVLASDNEEKQAETFSEFDDMSSMAETASNLDD
VRSECDAAEGNEVTPLASGFQSPNEATSRDMFPSSALSGGGTSVTSDNVSMSPTFSDSVF
SDIDVDSRTARGPRALPGNNLPMDSNRLFVPIKKKRAPSPPGSSPDRGSDSGGYTSSSSN
RNRLVDFDLEPRNSGATDTYNRTVNEIENLNLASNNTVPIDTGARPKTQVIGKHASNSDK
KNRKNVSNLKLKENFSDVQNGLFMMEENRPLSKDSGVGSSQFIDSVESGDVKLSEQQNMN
VDETRFSAALSLFDPLTQDDNTMASGDLLEGSTTSPPAGHAFQSYTNTNFQESSAGEPLI
SISNEKDTSQFKFDLPSSGVKENGGVSSACDMYIQSDRQTKRRGSSDSNRSSGSSLSKDD
SVNGERTSLDSSQRVDEKELPNGDENATPGKKRGLFKTFKDKIHKVVDVTSQTAAGIKKK
GTRHEKEAATSGDTSILDVNGTVEVSAKGAAVAEPNIIITETSDDILAKYRKKSILTSTP
SSEPATSDRERRLTLKDDDTTPLYDPNNLENCLAFLDAKRKLRIVLGSADFQQVGYSIFA
HSTVTYSPRELDMNRDNNDLVNLLRTQLSEAINLQNKDTIAQLHEALRCVRQFDSEGCKK
LVRSLQEDYRSRSSYVSYLVRCKQGLLNTLSHIHRLQSRIKREKEIYNKHMTSVCVRLFL
EFWEKHVMSFIADFQKLTVSDEKTDLLERFLQFLYQKMNRDVIWQAASENQLDDAGLAIE
RYLMSRIYTHAMFPNGDGDILRDQILQQHVKELSKIITPDHKDLKIPKMYHLECPWPAAQ
RELYMINAYKTPKDKVKCVQRCAATIMNLLSMANEKSVPAADDFTPVFIFVIIKANPPCL
LSTIQYVNSFFQDRLQGEEQYWWMQFVGAVEFIKTMDYQRDSMA
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atggctctaggactggacctagccgagctgtcgaaacatctgagacaggagagactgttt
gttacgtcagaaagggaacaacttcaaaatctttacgaacaggtgaaaacatctgcagaa
cagttgtatcatcagtcatggattggtcgtcaacagaaagaccttcttgatctcctgata
cggtccgctcaacaggtgaccccggcgcagtgctgcagtcagaccaaccagctagaatcc
ctcaactttgtggacggatataaacacctgagttatcatgattctaagtatggcgaattt
atgaaatttctggtggaaaacccaactcttttaggacaaattttgtacatggccgatcaa
aataatataccgaatgtgcaagaaatggtgaaagtattgatgcattctgtttttggaaat
tgtgtcctgcaagaagatgagactagcatgcttcatttgttgaaaactttacttgacctc
caggtggcgccctgtgataacccaaggcgaatgctaagacgcggatctagcgcgtttagc
attgcatttaaacagttgtttgacattgtgttctctgcgaaacttttcctgacggcgtca
ttgcatgacccagttatgaggcttctcatggaggacgaatggttctatgacattgatcca
ggaaaggcgttagttcggttcccacctcaggaaagactgcgcagattcggggaaccaggc
acagactcttataaggaaaaattggtcaaatatagaacaacaatagtggataaattagtg
ctgatggccagtagatttattacatctatcaaaaataacatgcattgcttcccaccaagt
ttgggatggattatatctcaggtatatcaaacactggctaaaagtggtaaggtagagatg
ggagaggtgcgggccgtgtgtgctgatctcgtgtttgccctgtttatatgccccgcagta
tgtgaccccgaaccgtatggtataaccaccgacgtacctataagccatatagcaagacat
aacttgatgcagatggcacaaattattcaagtgttggccatatcacagtgggaagaaata
gatcccagactgcatgacttgtatggaaagtttgaaaagggttgtatgtcaacgttgcta
gattctctactagatggcataggagttgagctgccatccaccaacaatgcccagcttcct
tgcttaactagaacctcttcactcatacagttatctcatttgaatagtctgatttccttc
ctaaagtctgctctgccatttgtagaggatagtacagagaagaaatgtttggatgagctt
ctatctgccctggtccttgtaacaccccagacggcagtacagaaccctcttgccatgatt
gggtctccaagtagcaataccccacctggtactcctgttactcataaaaagtcgaaaggt
aagaagaagatgtcagtggcctctgtgatgacccagataagccatgtatctgatgaaact
gccagcatgtcctcaatgtcattggatgcaccggaagcccagccgaccaatcagatggaa
gatgtacttgtgctttctcttggcgatgacttagagtgcccgggtatgatgtctgaacaa
aaggttttatcttttgagcaagaaaataagcggaggagggtgaagtaccagactgtgcag
ggtggatatgtggttggaccagtagagattcaggaaaagaggacaagattttcactgtca
catgaccaggaatctataggaaacacaagtgacattccagaggcaatatcagagggagca
tcaagccactctgtcggttcacaagatctagagaatgatgatgacaacgataatttctcc
gacatgatctctgctaatgtaagtgggcgtggcacaccaaacatcagtgggagtggtcga
gacacgcccctttcccaggcagaaagtgaacaagaggttgcacctcatccacagccagca
ctgcctgagactgtacagaaaaagaacagggaagatgtaactgagaagtttgggaagttt
gagatcaaggaattggattatgatttgaagtcaactgtcagtgatacctggagtacagat
gtgttggccagtgattcggaacctcccgagggaaaccagtccgtcagactagaggagatc
gcagaggaaatggttcggcaacatcttcttgctgagagagtgtcggagatttcagaaact
gcaagtgatgcatggagtacagacgttctggcctccgacaatgaagagaaacaagcagaa
acattctcagagtttgatgacatgagcagcatggcagaaactgccagtaatctggacgat
gtacggagtgaatgtgatgctgcagaggggaatgaagttactcctcttgcttcaggtttc
caaagtccgaatgaggcaacaagtagagacatgtttcccagtagtgccctcagtgggggt
ggtacctcggttacatcagataatgtcagtatgtcaccaacattttctgacagcgtcttc
tcggacattgatgttgatagtcgaacagctaggggaccaagagcattgccaggcaacaat
ttgcctatggactcgaatagattatttgtgccaataaagaaaaagcgggctccttctcca
ccgggctcgtcaccagataggggaagtgatagtggagggtatacgtctagttcatcgaat
aggaatagactggtagactttgatttagaaccgaggaattcaggtgcaactgacacttat
aatagaacggtgaatgagatagaaaatttgaatttagcttctaataacacagttcctatt
gacacaggtgctcgaccaaaaacacaggtaataggtaaacatgcgtctaacagtgataag
aaaaataggaaaaatgtatccaatttaaaactgaaagaaaattttagtgatgtacaaaat
ggactctttatgatggaggaaaatagaccgctatcaaaggattctggtgtagggtcctca
cagtttatagattcagtggaatctggtgatgtgaaactgtccgagcaacaaaacatgaat
gtcgacgaaacccgtttttcagctgccctaagtctttttgacccattaacacaggatgat
aatacaatggctagtggtgatctgttagaagggtccaccactagcccacctgcagggcat
gcatttcaaagctatacaaatacaaactttcaagaaagttcagctggtgagccattgata
tctatatcgaacgagaaagatactagtcagtttaaatttgatcttccatcttctggagtg
aaggagaatggaggtgtgagcagtgcctgtgatatgtatatacagtcagacagacagaca
aaaagacggggaagttcggacagcaatagatcatcagggtctagtctgtcaaaggatgac
tcagttaatggtgaaaggaccagtctggatagttcacaaagggtggatgaaaaggaatta
ccaaatggtgacgaaaatgctacaccaggaaagaagagggggcttttcaagacgtttaaa
gataaaatacacaaagttgtagatgtaacatctcagactgccgcaggaatcaagaagaaa
ggaaccaggcacgagaaagaggctgcaacatcaggagacaccagtatattagatgtcaat
ggtacagttgaggtttctgctaaaggtgccgctgttgccgagccaaatatcattataaca
gaaacttcagatgacattctggccaagtacagaaagaagtcgatattgaccagcacacca
agttccgagccagctacgtctgacagagaaaggagattgacccttaaagacgatgataca
accccactgtacgaccccaacaacctggagaactgtttagcattcctagatgccaagaga
aaacttaggatagttcttggttcagcagactttcagcaagtaggttacagtatatttgca
cacagtacagtaacgtacagtcctagagaattggatatgaatcgggacaacaacgatctg
gtgaacttactgcgtacacaactttctgaggccataaatctgcagaataaagacaccata
gctcagttacatgaggcgctacgttgtgtaagacagtttgacagtgaaggatgtaagaag
ctggtcagatctctacaggaggattaccgtagcaggtctagctatgtctcgtacctagtc
agatgtaaacaaggattgttgaatacactgtctcatatacatagacttcagagtagaatt
aaaagagagaaggagatttacaacaagcacatgacaagtgtatgtgtgaggttgttcctg
gaattctgggagaaacacgtcatgagctttatagctgacttccaaaagttaacagtgtct
gatgaaaagactgaccttctggagagatttctgcaatttctgtaccagaaaatgaacaga
gatgtcatttggcaagctgctagcgagaaccagttagatgatgctggtctggcaatagag
cgttacttgatgtctcgtatatatacccatgccatgtttccaaatggagatggtgacatt
ctcagagatcaaattttacaacaacatgtcaaagaactcagcaaaattatcactccggac
cacaaggacctgaaaatacccaaaatgtaccacttagaatgtccctggccagcggcacag
agagaactctacatgatcaatgcatacaagacaccaaaagataaggtcaaatgtgtgcaa
cgttgtgctgcaactattatgaacttactgagcatggcgaacgaaaaatctgttccggcc
gcagacgattttactccggtgtttatatttgtgataataaaagcaaatcctccgtgttta
ttatcgactatacaatatgtgaacagttttttccaggaccgtctacaaggggaagagcag
tactggtggatgcaattcgtaggtgccgtagaatttatcaaaacgatggattaccagagg
gattcaatggcttaa
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