Mercenaria mercenaria (northern quahog): 123553019
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Entry
123553019 CDS
T07835
Name
(RefSeq) RING finger protein 17-like isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmer03036
]
123553019
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Gene silencing
piRNA pathway
123553019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
zf-B_box
Agenet
zf-RING_UBOX
SMN_Tudor
zf-RING_5
Tudor_4
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
ANCHR-like_BBOX
CdaS_N
CoV_NSP9
Motif
Other DBs
NCBI-GeneID:
123553019
NCBI-ProteinID:
XP_053397740
LinkDB
All DBs
Position
4:complement(80049472..80158213)
Genome browser
AA seq
1911 aa
AA seq
DB search
MQKCPACPKCSAHFIAKDSGRLHKRPLVLNCGHTFCESCLLQLAREKKTSIICPSCKEET
GLLSGESSVKLLCPDRYIMGTVIHNQKTLLEQELLKLKEASEIAGQRRHTSSGCSDSSQL
LSEVDPDRLCKECTKRPATSHCAKCECNMCSVCFQRVHSLSRSLQLHTAVPLLEEGQLEV
SQMCKEHENRPIEYYCDDDDMIICSRCVIVGNHKGHNISSIEDKNRCIVNEMEPNLQVAN
HVFRRLKKIDKEFPLLVPDFKKEMSGVLEDVRAHFQHLHGILQIREHALEQQVLHVVREG
LQPIEKLRSDLHNEFKQLDQTIKAAHRIMNNNDEVIVNAKEILEKLAHAKDIPCIIELTE
STESTEKIGFMEGPSVDTLLKEYGSICGSVPQRFTMFTLRDKPEKFSEDTDSCVTTPPGS
DYQSVTSETTSQGDDVIIEEEQEIVLEDDGAKSVKSIKVAQPSKFARKSLPKKKKFKGQN
ENVVVTHIQSPCKFMVQLKRDSSKIAVLSHSLQQFCNSLSTKHHMVTGVDVDDIVLAQYS
LDNLWYRGRIKHVMEPEDGQFENTNVEISYIDYGNTEVVNVQRLRNMQAKFMKHPEFAIE
CCLFNTTSKVKDGTWSVEAVQTFAKMVESKVMLLTIVREVNNIMYVDLCKPADDDIVDDR
PMSVRDALVFLDLARFESPCSLPEPGGAPAPKRNYLTPTPMEQGQTYCVIVTYAGTPDCF
YAQELGDETNYLATMMAHIQDTYNKQMKDTWQIICPSVGMICVSQFSGDGLWYRAKIVDL
PGHQDVVVQYIDYGNKETVHVFNLRKIIDSFLVLPAQAIQCMLTDVEPLNANEGWTTECL
HYWSEKVLMKKFFLKVIKTNNELSVVLRDLDTEDYCDTLNVKVVEDGMARSVGEWSEPQN
ITELANEMSDVVPRLSYQAGSGSFPEPCDLGHQPVYWKSRNSKPSRRYEETVLTPPGSPD
HTSQPKQHQPKQNQPKQHVEKSTVAQALLQNSPSNQNSVVEKMRSPGKKSPTTTPNKTHA
SPVRKEIDSDSSTMSSSLTDTGREAGKITTKKSPSMKSKMKSERGSGEKKKNKKIEVEVT
VSHFVSPSEYYLQLVSAKDELEALMSEIFETYHNSVMTMTNWSAGNYCVAYSTTTGRWYR
AKITKVIQKSLMEVHMLDYGFSEMISTNNLRQVMKQYRKSRAFTFACKLAGVTPAGGMKE
WSKTACEFMEANITNKKLFLNQRGNPVDGKLPCDLIIEEYIDETALEPGRKTYHSLIDRL
KEKGLAIPIPKKHGEVHDKQKVFPVCYYKKAEAEVKTGDKVMPVYVDYDAVIHCYTMEGD
DIFQNMCDVLHQKFNNSEPPGPEQTYEKGQACAAFYEKDGQWHRATVLEIEPTKVKIHFI
DYGNSEWVGYEDLRADIEEFTDIPQQTFLCTLHDVRPLTENGKWDLNTLEMIHKDLVNKY
CIITVMEKNGYEHEHMTVNIEVNGKDYGTHLVHYGMAQRGDYITDQEMQSAQIEHILQNK
NPFKMMTSPELEEMLSVLVTHVELPDIVYIQPSKVGVTDEMDINDPHMKKVIKRNKQLEK
LEKLSSDLYHAAPTLPAIPVPHIGLPCCAQFGYDQCWYRAVIITVYQETQQILVLFVDYG
NSEIITYNKLRAIPPSYLNLPCQALRCRLSKLKPAANTVSWTKNALVEMMSVVANKPLLA
KVVKDDPLRVELYEGSEDAGYVYQSVIDGGYIQLNTSSRDSPVTSPIVKEVVTVKKTIEV
NVPEVVVTKAREVNVKTDSESESSKQNVSVVSVAEQSKVAVTTEKMVNDTGATISQITVD
STTDDDRSEISSVSVATVSTTTGEKVSKSSKSWADMAEEGSSLDVDELLEFEDSDQEKTG
SASEAEQKKYENEGDQRRSQKEKKKIDPEDRKKTRDSRKVEVVQHEDECFE
NT seq
5736 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagtgtccagcttgtcctaaatgttctgcccatttcattgcaaaagacagtgga
cgattacacaagagacctctggtattgaactgtggccatacattctgtgagtcatgtctg
ctgcaattggcaagggagaaaaaaacaagcatcatatgtccatcatgcaaggaagaaact
ggactattatcaggggagagcagcgtgaaactactgtgtcctgacagatatatcatgggt
actgttatacacaaccagaaaacactgcttgaacaagaattattaaaactgaaagaagcc
agtgagatagccggacagcgtcgacacacatcctcaggttgttccgatagttcacaattg
ttgtctgaggttgatccagatagattatgtaaggaatgtaccaaaagacctgcaaccagt
cactgtgccaaatgtgaatgtaatatgtgctctgtatgttttcaaagggttcacagtttg
tcaagaagtttgcagttacatacagcagtaccgttattggaggaaggacagttggaagta
tcacagatgtgtaaggaacatgagaaccgacctatagaatactactgtgatgacgatgat
atgattatatgttcacgatgtgtcatcgttggaaatcataaaggacataatatatcttct
attgaggataagaaccggtgtattgtgaatgaaatggaaccaaatcttcaagtagccaat
catgtgttcagaagattgaagaaaatagacaaggaatttccactgctggtaccagatttt
aagaaagagatgtctggagtattggaggatgttcgagcccacttccagcacctccatggt
atattacagatcagggaacatgcactagaacaacaggttcttcatgtggtcagggagggg
ctgcaacctatagaaaaattgagaagtgacttacataatgagtttaaacagctggaccag
acaattaaagccgctcacagaataatgaacaacaatgatgaggttatagtgaatgcaaag
gagattttagaaaaactggcacatgccaaggacattccgtgtatcatagaactcactgaa
agcactgaatctactgaaaaaattggatttatggaaggtccctcagttgacacactgctg
aaagagtatggatctatttgtgggtcagtgccacagaggtttacaatgttcacactgaga
gataagccagaaaagttctcggaggacacagacagctgtgtgacaacaccacctgggtca
gattaccagagtgtgacgtcagagaccacatcacagggagatgatgtcattattgaagag
gagcaggagattgtgttagaagatgatggagcaaaatctgtaaaatctatcaaagttgcc
cagccttcaaaatttgcgaggaaatctttaccaaagaagaaaaaattcaaaggacaaaat
gagaatgtagttgtgacacatatccagagtccatgtaagtttatggtacagttgaagaga
gattcctcaaagatagcagtattgtctcacagtctccagcagttctgcaatagtctttca
acaaaacaccatatggtcactggggtagatgtagatgacatagtgttagctcagtattca
ttggacaacctgtggtatagggggcgtatcaagcatgttatggagccagaagatgggcaa
tttgaaaacacaaatgttgaaatatcttacatagactatggaaatactgaagtggtcaat
gtgcaaagattgaggaatatgcaagccaagtttatgaaacatcctgagtttgcaatagag
tgttgtctttttaacactacttcaaaggttaaggatgggacctggtctgtagaagctgtt
cagacatttgctaaaatggtagaaagcaaggttatgctgctgacaattgtacgtgaagta
aacaacataatgtatgtagatctgtgtaaaccagcagatgatgatattgtagatgatcgt
ccaatgtctgtgcgagacgcactggtgttcctcgaccttgccaggtttgaatctccttgc
agtctacctgaaccaggaggtgctccagccccaaagagaaattaccttaccccaacccct
atggaacaaggtcaaacgtactgtgttattgtaacctatgctggaaccccagactgtttc
tatgctcaagagttgggagatgagacaaattacttagcaacaatgatggcacatatacaa
gatacttacaacaaacagatgaaagatacctggcagatcatctgtccttctgtaggtatg
atttgtgtatcacagttcagtggggatggattatggtacagagcaaagatcgtggacttg
ccaggtcaccaggatgtagttgtacagtatatagattatggaaacaaggagacagtacat
gtattcaacttaaggaagattatagactctttccttgttctccccgcacaggcaattcag
tgtatgttaacagatgttgagccactaaatgctaatgaaggctggactactgagtgtcta
cattactggtcagagaaagtgctgatgaaaaagttctttttgaaagtgatcaagacgaac
aatgagctgagtgttgtgctgcgtgatttggatacagaggattattgtgatacacttaat
gtcaaggtggttgaggatggcatggcaagaagtgtcggtgaatggtcagagccccagaac
atcacagagttagccaatgagatgagtgatgttgtaccaaggctgtcataccaggctggc
agtggatcattcccggaaccttgtgacctgggacaccagcctgtgtactggaaatctagg
aactcgaagccatcaagaaggtatgaagagactgtcctcacacctccaggttccccagac
cacacatcacagcccaagcagcatcagccaaaacaaaaccagccaaaacaacatgtggaa
aaatcaacagttgctcaagccttgttacagaatagtccatcaaatcaaaatagtgttgtt
gagaagatgagaagtccaggcaagaaatcaccaactaccacgccaaacaaaacacatgct
agtccagtaaggaaggagattgatagtgattcttcaactatgagcagttctttaactgac
acaggaagagaagctggaaaaataacaacaaagaagtctccaagtatgaagagcaagatg
aagagtgagagaggaagtggtgagaagaaaaagaacaagaagattgaggtggaagtaact
gttagccactttgtctcgccctcggagtattatctgcaacttgtcagtgcaaaggatgag
cttgaagcactgatgtcggagatatttgagacataccataacagtgttatgactatgaca
aattggtcggcaggaaattactgtgtcgcatactcgactacaactggcagatggtaccga
gcaaagattaccaaagttatacagaaaagtctaatggaggtacacatgttggattatggg
ttctcggagatgatcagcacgaataatttacgtcaagtgatgaagcagtacaggaagagt
cgagcgttcacgtttgcctgtaagctggctggggtaactccagcaggaggaatgaaggaa
tggtctaaaacagcctgcgaattcatggaagccaacatcaccaacaaaaaacttttcctg
aaccagagaggaaatccagtggatggaaagttaccgtgtgatctcataattgaagagtat
attgatgagacagctctggagccaggacgtaagacataccactccctgatagacaggtta
aaagagaaaggcctggcaattcccataccaaaaaagcatggggaagtgcatgataaacag
aaagtgtttcctgtctgttactataagaaggcagaggctgaggttaaaacaggggataaa
gtgatgccagtatatgttgactatgatgctgttatacattgttataccatggagggagat
gacatatttcaaaacatgtgtgacgtcctgcaccagaaatttaacaacagtgaaccacct
ggaccagagcagacatatgagaagggtcaggcttgtgccgcattctatgagaaagatgga
cagtggcatcgagctacagtgcttgaaattgaaccaactaaagttaagatacatttcatt
gactatggtaacagtgagtgggtggggtatgaagatctccgtgctgatattgaagaattt
actgatattccccagcagacatttttatgcacactacatgatgtgagaccactgacagag
aatggtaaatgggacctgaacacactggagatgattcacaaagatctagtgaacaagtac
tgtattataactgtgatggagaagaatggatatgagcatgaacatatgacagtgaatata
gaggtgaatggtaaagactatggaacacatcttgtacattatggtatggcacagcgtgga
gactatatcacagaccaggagatgcagagtgctcagatagaacatattttacagaataaa
aatccattcaagatgatgacatcacctgaacttgaagagatgttgtcagtgctggttaca
catgtagaactgccagatattgtttacatacagccaagtaaagtaggtgtaacagatgaa
atggatattaacgatcctcacatgaaaaaagttatcaaaaggaacaaacagctggagaag
ttggagaaactgtcatcagatctttaccatgcagctcccaccttaccagctataccggta
cctcacataggtttaccatgttgtgcacaatttggttacgatcagtgttggtacagagct
gtgataatcactgtttatcaagaaactcaacagattcttgttttgtttgtggactatgga
aactcagaaatcatcacatacaataaattgcgggcgattccacccagttacctcaatctg
ccatgtcaagctttgagatgcagattgtctaaattaaagccagctgctaacactgtctca
tggacaaagaatgctctagtggagatgatgtctgttgttgctaataaacctctccttgct
aaagttgtaaaagatgatccattgagagtagaactgtatgaaggaagtgaagatgctggg
tatgtgtatcagtctgtgattgacggtggatatatacagcttaatacttcttcacgtgac
agtcctgtgaccagtcccattgtaaaggaagttgtgacagttaaaaaaacaattgaggtg
aacgttcctgaagtggtagttacaaaagctcgtgaggtaaatgttaaaactgactcagaa
agtgaatcctcaaaacaaaatgtttcagtagttagtgttgcagaacagtcaaaagttgct
gtaacaacagaaaagatggttaatgacactggtgctacaatctcacagataacagttgac
agtacaactgacgatgacagaagtgaaatcagttctgtttccgtggcaacagtctcaact
acaactggtgaaaaagtgagtaaatcaagtaaatcttgggctgatatggcggaggaagga
tcttctttagacgttgacgaattactcgagtttgaagactcagatcaagaaaaaactggc
agtgcttcagaagcggaacagaaaaaatatgaaaatgaaggtgatcaaagaaggtcacag
aaagaaaaaaagaaaatagatcctgaagacagaaagaaaacaagagattctaggaaagtt
gaagttgttcagcacgaagatgagtgctttgagtga
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integrated database retrieval system
