Mercenaria mercenaria (northern quahog): 123553056
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Entry
123553056 CDS
T07835
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123553056
04121 Ubiquitin system [BR:
mmer04121
]
123553056
Transcription factors [BR:
mmer03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
123553056
Ubiquitin system [BR:
mmer04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
123553056
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
hAT-like_RNase-H
NAD_binding_11
Motif
Other DBs
NCBI-GeneID:
123553056
NCBI-ProteinID:
XP_045198743
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Position
7:complement(58604973..58607118)
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AA seq
601 aa
AA seq
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MAEEEAVADFKIVEKESKGGKKSFVWKFFGFVETQGVINKKSVACKLCKLNMPYSGNITN
LRAHLDRKHWAEVKDQAVPAPNVLSQTTTSASASTSSSGDPPLPSLNQEGQPTITHLFAK
QKSFPNTSVRAVEITKAIADFLILDMKPLDTVEGEGFKTLMKVLEPRYSVILRNHLLERY
IVPMYQNTVENVKLELSKGKRHAFTTDGWTSMSAESFITTTCHYIEPQMYQLHSKVLDTK
YCPVNHTAENLSAEIKATVEKWDLKDSVSVTDNAANIVKACNLAQMPHFGCFGHILNLAV
NRCLSVPEISSLLGKCRKLVSVFKQSSLKTTALHTTEANLELKDLQVIQDVETRWNSALM
MIKRLLEILPAIWAVLYKDKKNSHLLPSDTDRNHMEDLKDLLQPVEEATKKVYAEKTSTV
SLILPTMERFVKHDFVPKATDSSMIVKAKDAIRSDLMKRYVKDDEQQLLLTATALDPRFK
KLQWLDQEKRNDVYSELKKDLINVEIPLPAVNIKSEPGVDNIKTETESSSEAANVTEESE
RSPQKKKTKQEVSGPVDEADFFDVLFVKEEKSEITKADVIDREFDGYMKEDILSLKQDPI
E
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagaggaagcagtcgccgactttaaaatagtagaaaaagagtcaaagggagga
aagaaaagcttcgtatggaaattcttcggctttgttgaaacacagggtgtaatcaacaaa
aaaagcgtcgcttgcaaactttgcaagctgaatatgccctacagtggcaacataacaaat
ttgagggcccatctcgatcgtaaacattgggcagaagtaaaagaccaagcggtgccagca
ccgaatgttctttcacaaactacaaccagcgctagtgccagcaccagcagcagtggtgac
ccaccactaccatccctgaatcaagaaggacagccaaccatcactcatttgtttgccaag
cagaagtcctttccaaacacgtcagtaagagcggtggaaatcaccaaagctatagcagac
tttttaattttagatatgaagccgcttgatacggttgaaggcgaaggcttcaagactttg
atgaaagtgcttgaacccaggtactcagttattttgagaaatcaccttttagaaaggtac
attgtgcctatgtatcagaacactgttgaaaatgtcaaacttgaactttcaaaggggaag
cggcatgccttcactactgatggttggacgtctatgtcggctgaaagttttatcacgaca
acctgtcactatattgaaccacagatgtaccagctccattctaaagtgcttgatacaaaa
tattgtccagttaaccacacagctgaaaatctgtcggcagaaattaaagcaacagtagag
aaatgggacttgaaagattctgttagcgtgactgataacgcagcaaatattgtgaaagca
tgtaaccttgcccagatgccccattttggttgtttcggccacattttaaacctagcagtc
aacagatgtctgtctgtgcctgaaatatcttctttgctggggaaatgcagaaaacttgtt
tcagttttcaagcaaagttctttgaaaacaactgcactgcatacgacagaggctaacttg
gaactgaaagacttacaagtgatccaagatgtagaaacgcgatggaactcagccctcatg
atgattaaacgcctgcttgaaattctgccggccatttgggctgtattatacaaggacaag
aagaattcacatttactaccgtcagacactgaccgcaatcatatggaagatctgaaggac
ttacttcagccagtagaagaagcaacaaagaaagtatatgctgaaaagacaagtacagta
agcttaatactacctacaatggagagatttgtgaagcatgactttgtgccaaaagccact
gatagcagcatgattgtcaaggcaaaggacgccattcgttcagatctgatgaaacgatat
gtgaaagatgatgaacagcagctactgctaactgctacagcattagatccaaggtttaag
aagttacagtggcttgaccaagagaagcgtaacgatgtatatagtgagttgaaaaaggat
ctaataaatgtagaaattccattaccagctgttaatatcaagagtgaacctggtgttgat
aacatcaagactgaaacagaatcatcaagcgaggcagctaatgttacggaagagtctgag
agaagtccacagaaaaagaaaacaaagcaagaagtcagtggtcctgttgatgaggctgat
ttttttgatgttctttttgtaaaggaagaaaagtctgaaattacaaaggcagatgtaatt
gacagggagtttgatggctatatgaaagaagacattctttctttaaaacaggatcccatt
gaatga
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