Mercenaria mercenaria (northern quahog): 123553185
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Entry
123553185 CDS
T07835
Name
(RefSeq) histone deacetylase complex subunit SAP18-like
KO
K14324
histone deacetylase complex subunit SAP18
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03013
Nucleocytoplasmic transport
mmer03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123553185
03015 mRNA surveillance pathway
123553185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123553185
03036 Chromosome and associated proteins [BR:
mmer03036
]
123553185
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123553185
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
123553185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
123553185
NCBI-ProteinID:
XP_045198868
LinkDB
All DBs
Position
4:7002936..7010885
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AA seq
157 aa
AA seq
DB search
MALESTVQLQQNDREKTPEKPVDREKTCPLLLRVFYNTGRHSPLNEYTRGNVPSNELQIY
TWLDATLKELTSLVKEVNPDARRKGTFFDFSIVYPDSRSPTYRMREIGTTCSGHRGADDT
VSLASKKFVIGDYIDIAITPPRGPMRPGNMGRRPRPY
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atggcactagaatcaactgtccaattgcaacaaaatgacagggaaaagacaccagaaaag
cccgtagatagggaaaagacatgcccactgctgttgagagtgttttataacactggaagg
cacagtccactgaatgagtacacaagggggaatgttccatcaaatgaacttcaaatatac
acatggttggatgctacactgaaggaactgacaagtttggtgaaagaagtgaacccagat
gcacgcagaaagggaacattcttcgatttctctattgtgtatccagactccagatctcca
acctacagaatgcgtgaaattggcacaacttgctctggacatagaggagctgatgataca
gttagtttagcgtcaaagaaatttgtgattggagattacatagacattgcaattacacca
ccgcgaggaccaatgcgccctggaaatatggggagaagaccaagaccgtattaa
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integrated database retrieval system
