KEGG   Mercenaria mercenaria (northern quahog): 123553760
Entry
123553760         CDS       T07835                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA excision repair protein ERCC-5-like
  KO
K10846  DNA excision repair protein ERCC-5
Organism
mmer  Mercenaria mercenaria (northern quahog)
Pathway
mmer03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mmer00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    123553760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmer03400]
    123553760
DNA repair and recombination proteins [BR:mmer03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     123553760
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc UIM
Other DBs
NCBI-GeneID: 123553760
NCBI-ProteinID: XP_053404801
LinkDB
Position
7:complement(83625052..83663739)
AA seq 1680 aa
MGVHGLWQLLSSTGKPVPLDSLEGKVLAVDVSVWLHQLSKGMRDSSGNPLPNAHLHGLFT
RICKLLFYRIKPVFVFDGGVPTLKKQTLASRRNKREDAEKTSSLMQQKILTNLIRSQALK
EACGLDKLPDLPPPPKSSAKGNKDVMFQLPPIPEASKPYMSQKNDEDQMYIERRELQEMV
EDAYEDISKIDVESEDFQALPPDVQHEIMTDMRLRKKNYNLSKIVDLPDDSKDFANYQIA
KLVKHNKLNTRLDEVRKEMNDRQTRSLTKRYGKRFQDTDDIYSQRVVSEDSSHYILVKRN
LRRKREEEEKEREMNKYLLETVNDQLETVEEADELLLDSDEDNCDKIDIMEESRLIFEEL
GGKLDDVSENIEEMKSKTTETKEIQRNKMKEGTVEDKPRFRAVIEVESDSGSESSDESVQ
IVETMENEAVVIDDPQVDPELQFAIELSLKEQRHIDKSKQEDLNEKSKHYTGKKSKDVES
FSGLNKNSNNSGIPVVTARRQTRQRSNEQRQKNIVGDSSVQQQDSVEQRRTETLRASNKV
NSGKTFEKIRTSKTKIIEKADSARENKRVKKTKTDAGSIDKSDGLDSTARMEEIKSTTGI
FKRKISCLSNESTDSCEESNKVRKVDLSDVDSEVEADSDGSSDSEGDFIEVKVDLTKVKE
DDLFPASMFETDTGEATASYKPEVNKDNAKEVENSTEDINDTVTVETANEKAFVSVVRKD
VEVENKVNVSSAAHKKVETIAEVENDVEVNGIEDEESKFDKDKRHIDDQITVVESEEEGL
ESEDRNGDIRIKTKPDVDKKLEAKATEGEEIGAEDNITMETEADNISDESSEEPGMVEHS
NKRASSPAVPSLVRQFESVNEQNVRGMRENLASENRQLRLEQGRQERLAVSITDQMHSEA
QELLQLFGIPFIVSPTEAEAQCAQLELIKLTNGTITDDSDIWLFGGKCVFKNFFNQQKHV
ECFKEVNIKSQLGLTRESLINIALLCGSDYTEGIRGVGTVTAMEILAKFPGNGLESLVKL
KTWWDNAQKEIKVPSKQSKLLSKLRDLDIDEGFPNPQVVEAYLSPVVDDSREKFSWSLPN
LEQLRQYPXXXSKVKLKWNREKTDEVLLPVLKRLSEKQHQRSISAFFQPEVYMNPAPVKS
KRLQKVVNKFINPTEEQEDSDDEQKNVKKKTRSKGQKGKGDDEKTGSEGQYDCDNQKEVT
GTSSVSKRRTKAVNKKNDGAVIQKENGGNIESMTEKKPNPKAQGHLKEAPDETAVLDVVA
NESKNTDNAELGSEKTGKGKSVRGRGRGRGRGKGAGSTRSLRSSKVEEKERFNSDSESSV
DSESDSSTTSSSSDDGDFDDSDGDFDDEEDEGGSGINVIQTGLNIDEILNLKMGCSFDVA
KPVKMSKQKGKVIENVMNVNEILHLESGADDINKVIDVCNTVEEAAEGEADQDGNLLETD
QIIDDTFANEGGFIKEEEDEMEEWPETMTDEIVKAVESSEKTIALTSDFDKKSVKINRNR
KELSEERIATSKLSNFKDIGSEESCKIGTKRTRSSRTNSTRDKSVVIKSMFKQEKVDKVK
SDSCTESNQLKMSEKVILIDESKSVKSVATVKPIKAEKTGAKLSKPKHDSIYTNDPIKPV
VTGLPWADKKKGQKKKQSAKGQGKIKLHTIAPVETVVKSKQIENKKTFESVNLSESDSDD
NT seq 5043 nt   +upstreamnt  +downstreamnt
atgggagtgcatggactctggcagctgttgagttctacaggcaagcctgtacctttagac
tcactggaggggaaagtactggctgttgatgtgagtgtatggttacaccagttgtcaaag
ggaatgagagacagttctgggaacccgctacctaacgcacatcttcatggtttgtttaca
aggatctgcaagcttctgttttacagaattaaacctgtgtttgtctttgatggtggtgtc
cctacactgaagaaacagactttggcttccagacgtaataagagagaagatgctgaaaaa
acaagctccttaatgcagcaaaagattctaaccaatctgattcgtagtcaggctctcaaa
gaggcttgtggactggacaaattaccagatttacctccaccaccgaaaagctctgcaaag
ggaaataaagatgttatgttccagttgccacccataccagaagcttccaagccgtatatg
tcccagaaaaatgatgaagatcagatgtacattgagagacgagaactacaggagatggtt
gaggatgcgtatgaagatatcagtaaaattgacgtggaatcagaggatttccaagctctg
ccaccagatgttcaacatgaaatcatgacagatatgagattacgaaagaaaaactacaac
ctgtcaaaaattgttgatttaccagatgattctaaagatttcgccaactaccaaatagct
aaacttgtaaagcataataaactcaatacaagacttgatgaagtccgtaaagaaatgaat
gatagacagacacgttcgttgaccaaacgctatggcaaaagattccaagatacggatgat
atttattctcagagagtggtgtctgaagattcttcacattatattctagttaaaagaaat
ttaagaaggaagagggaggaggaagaaaaggaaagagaaatgaacaaatatttgttggaa
actgttaatgatcagcttgaaacggtagaagaagcagatgagttattactggattctgat
gaagataattgtgataaaatagatattatggaagagagtagactgatttttgaggagtta
ggtggtaaacttgatgatgtaagtgaaaatatagaagaaatgaaaagcaaaaccacagaa
acgaaagaaattcagagaaacaaaatgaaagagggcactgtagaggataagcctagattt
cgtgcagtcattgaagtagaatcagattctgggtctgaaagtagtgatgaaagtgtgcaa
atagttgaaacaatggaaaatgaggctgttgtaatagatgacccacaagttgatcctgag
ctgcagtttgcaattgagctgtcattgaaggaacagagacatatagataaaagtaaacaa
gaagatttaaatgaaaaaagtaaacattatacaggcaagaagtcaaaagatgtagaatct
tttagtggtttgaataaaaattctaataattcaggcattcctgtagtaacagccagaaga
caaacacgtcaaagatccaatgaacaaagacaaaaaaacattgtaggagactcgtcagtt
caacaacaggattcagttgaacaaagaagaacagaaacattacgtgctagtaacaaggtg
aatagtggtaaaacctttgagaaaatcagaactagtaaaactaaaataatagaaaaagca
gattctgccagagagaataaaagagtcaaaaagaccaaaactgatgcaggaagtatagac
aaatcagatggcttagactctactgcaagaatggaagaaataaagtctaccactggtatt
tttaaaaggaagatttcatgtctttcaaacgagtcgactgacagttgtgaagaatcaaat
aaagtacgtaaagtagatttatcagatgttgatagtgaagtagaagccgacagtgacgga
tcttccgactctgaaggagactttatagaggtgaaagtggacttgaccaaagtgaaggaa
gatgatttgtttcctgccagtatgtttgagactgatacaggggaggcaactgcaagttac
aaacctgaagtcaacaaagacaatgccaaggaagtggaaaacagtacagaagatattaat
gatacagtaactgtagagacagcaaatgaaaaagcatttgtcagtgttgtacgtaaggat
gtagaagtggaaaataaagtgaatgtcagttcagcagcacacaagaaagtagagactata
gcagaggttgaaaatgatgtcgaggttaatgggattgaggatgaggaatctaagtttgat
aaagacaagagacacattgatgaccagattactgttgtagagagtgaagaagaaggattg
gagagtgaagatagaaatggtgatataagaattaaaaccaagcctgatgttgacaaaaag
cttgaagcaaaggcaacagaaggtgaagaaattggagcagaagataacatcaccatggaa
acagaagcagacaacatttctgatgaatcttcagaggaaccaggtatggtggaacacagt
aataaacgagcgtctagccctgcggtaccaagtcttgtaagacagtttgaaagtgtgaat
gaacaaaatgtgcgtggaatgagagagaatttagcatcagagaacagacagttgagacta
gaacaggggagacaggagaggcttgcagtgtctatcactgatcagatgcattcagaagct
caggaattacttcagctgtttggtatcccatttattgtgagtccaactgaagctgaagct
cagtgtgctcaattagagctcattaaactcacaaatggaacaataacagatgatagcgat
atctggctgtttggtggaaaatgtgtttttaagaacttcttcaatcagcaaaaacatgta
gagtgttttaaagaagtgaatatcaagtcacagctggggttaaccagagaaagcctgata
aatattgccctgctttgtggtagcgactacaccgagggaatccggggtgttggaactgtc
actgcaatggaaattctggcaaagtttccagggaatggtcttgaaagtctcgttaaattg
aagacatggtgggataatgctcagaaggaaatcaaagtgccttcaaaacaatctaaactt
ctttctaagttgagggatttggatatagatgaaggattcccaaatccgcaggtggttgaa
gcttacctatctccagttgttgatgattccagagagaagttctcttggtctctaccaaat
cttgagcagctgagacaatatccttgataatgatcaaaggttaagctgaagtggaatcgt
gaaaagacagatgaggttcttctacctgtactcaaacgattgagtgaaaaacagcatcaa
agaagtatcagtgcatttttccaacctgaggtctacatgaaccctgcacctgtgaaaagt
aagagactccaaaaagtagtgaataaattcatcaaccctacagaagaacaagaggattct
gatgatgaacagaagaatgtcaaaaagaaaactaggtcaaaaggtcagaaaggtaaaggt
gatgatgaaaagactgggtcagaaggtcaatatgattgtgacaatcaaaaggaagtcact
ggtacaagtagtgtaagtaaaagaagaaccaaagctgttaataagaaaaacgatggagct
gttatacagaaggaaaatggtgggaatatagaaagtatgacagaaaagaaaccaaatcca
aaagctcaggggcatttaaaagaagctcctgatgaaactgctgtacttgatgtagtggca
aatgaaagtaagaacactgataatgcagaactgggttcggaaaagactggaaaaggtaaa
tctgtcaggggcagaggtcgtggaaggggcagaggcaaaggtgcgggatcaactagaagc
ttaaggagctcaaaagttgaggagaaagaaaggtttaattcggatagtgaatcaagtgtt
gattcagaaagtgactcttcaacaacatcatcatcatcagatgatggtgattttgatgat
agtgatggtgattttgatgatgaggaagatgaaggaggcagtggaataaatgtcatacaa
acaggtttaaacatagatgaaatattaaacctgaaaatgggatgtagttttgatgtagct
aaacctgttaaaatgtccaaacaaaaaggaaaggtaatcgaaaatgtgatgaatgtgaat
gaaattctgcaccttgaaagtggagcagatgacataaataaagtaattgatgtttgcaat
actgttgaagaggcagctgaaggagaagcagaccaagatggaaatttgcttgaaacagat
caaattattgatgatacgtttgcaaatgaaggtgggtttataaaggaggaggaggatgaa
atggaagagtggcctgaaacaatgacagatgaaatagttaaagctgttgaatcttcagaa
aagaccattgcattgacttcagattttgataaaaaatcagttaagataaatagaaataga
aaagaactctctgaggaaagaattgctacttcaaaactctcaaattttaaagatattggt
tctgaagaatcttgtaagattggaacaaaaaggaccaggtcaagccgaacaaacagtacg
agagataaatctgtagttattaaatcaatgttcaaacaagaaaaagtggataaagttaaa
agtgatagttgcactgaatccaaccaattgaaaatgtctgaaaaggtgattttaattgat
gaaagtaaatcagttaagtctgttgcaactgttaagccaattaaagcagaaaagaccggt
gcaaaattgagcaaaccaaagcatgacagtatttatacaaatgacccaattaagccagtt
gtgactggattgccttgggcagacaagaagaaagggcagaaaaagaagcaaagtgcaaag
ggtcaggggaaaataaagcttcacactatagcaccagtagaaacagtggtaaaatcaaaa
cagatagaaaataagaaaacatttgaaagtgtgaatttatctgaaagtgattctgatgat
taa

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