Mercenaria mercenaria (northern quahog): 123553763 Help Entry 123553763         CDS       T07835                                  Name (RefSeq) collagen alpha-2(IV) chain-like   KO K06237   collagen type IV alpha Organism mmer  Mercenaria mercenaria (northern quahog) Pathway mmer04382   Cornified envelope formation mmer04512   ECM-receptor interaction mmer04518   Integrin signaling mmer04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:mmer00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     123553763    04518 Integrin signaling     123553763  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     123553763  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     123553763  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:mmer04147]     123553763    00536 Glycosaminoglycan binding proteins [BR:mmer00536]     123553763 Exosome [BR:mmer04147]  Exosomal proteins   Exosomal proteins of other cancer cells    123553763 Glycosaminoglycan binding proteins [BR:mmer00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    123553763 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  123553763 NCBI-ProteinID:  XP_045199319 LinkDB All DBs Position 7:complement(83393868..83469576) Genome browser AA seq 1763 aa AA seqDB search MDLRLLGLLIFLSVNSLSSLVDGQRNRSEPECGGCTTSNGCKCVGEKGSRGFPGPPGPQG PQGNTGFEGPEGLIGPKGVKGEPGSPGILGPKGDRGKMGMPGFPGISGIPGLQGPPGPRG PAGLDGCNGTQGEPGVPGRPGEPGLEGPPGFDGLKGVKGEPGSAVEGFKGQKGESGPSGI PGAPGLNGNDGQPGLPGDLGPRGYPGPPGIPGKPGQKGNMGINYKPEKGEKGARGPKGIP GPPGTTKLPFTGNNETLQGAPGEPGMKGQKGESGPSGPRGFPGADGLPGRIGEPGMHGEK GVPGIAGPRGKQGLPGIPGFTGPKGDRGMDGLPGLSGLPGMKGERGYEGMKGNVGPRGPQ GPPGGPGGGDGPVGDPGPIGPRGPSGEDGLPGLPGARGEPGIQGPRGGPGIPGPPGPQGN DGPPGEKGDQGLQGFPGLDGLPGQPGYPGAKGEQGIKGEAGRSILGEPGRPGEPGRDGFP GAKGDSGPRGLPGLPGNSSVGRPGLPGAKGDIGPRGNPGLDGLPGLPGRDGPKGDTGGTC NLCQNGFKGEKGESGLPGRPGLSGERGPEGPPGEKGAPGYDGTPGQQGPQGRPGEKGLPG LAGLKGERGKDAQMPNEWIKPPKGEQGPPGLPGLNGERGPSGPPGPRGPQGLDGIQGEKG APGFDGIPGRPGLKGESGQPGRKGEPGFGMPGAPGERGEPGQPGLPGLPGMKGDKGISGE TIFIGNELKGTKGDRGPAGPPGLPGLDGISGVKGQSGEPGLQGLDGLPGRPGEPGLDGRP GEPGPRGLTGPRGDKGEPGVAGLPGFDGPQGEPGISGLPGLQGEKGDAGLPGNAVVGPKG EPGVFGEPGVPGLPGRKGERGLPGLDGLPGMKGNPGLNGGPGLDGLPGAKGEPGPVGPRG LSGEPGEPGLPGLPGSVGLKGEPGVPGVPGLQGEKGVRGNDGIPGRDGLPGLDGAPGPRG PDGDDGLPGLPGAKGDVGVVGFPGEPGRDGLPGLPGARGTKGDRGFPGRDGEPGLSGRPG EKGDSGLPGLPGMDGEPGQPGLPGMKGESGQPGLDGLPGSRGFDGTPGLPGMKGEQGQPG IGLPGDRGYPGEPGRDGLDGLPGQAGQKGEPGVPGFNGMKGERGIDGLPGNSGLPGLDGL PGMKGNAGLPGRPGEPGAPGDDGRPGLDGVPGAKGESGLPGRSGLPGLDGMKGERGFPGP EGPSGEPGLPGMKGDSGLPGLPGLQGRKGDPGFPGEPGRDGFKGEPGFPGRDGEPGVPGE KGDRGLNGIPGRKGEPGRDTVGLKGEPGPRGLPGLDGLRGQKGESGPSGRDGFPGAKGEP GIPGEGLPGMKGEPGFPGREGEPGLRGEPGEDGLPGAPGRKGDRGDAGLPGPPGEDGLRG ISGEKGEPGIPGVPGLMGMKGEPGLIGIPGPIGPKGEPGFPGRNGEKGDRGYDGEKGARG DPAPQNYLKGEKGDRGPEGFPGVSGLPGPQGEPGEPGRPGPRGPQGDIGVPGYPGSKGDI GDRGFNGQPGQDGLDGPRGPQGLQGIPGNPGYVPPVGFLMTKHSQSRNVPNCPDGMGKMW EGYSLLYVEGNERSHHQDLGWAGSCIRRFSTMPFLFCGTDNVCNYASRNDKSYWLSTNAP MPMMPVGETDIQPYISRCVVCDAPSNVMAVHSQTLTIPDCPVGWNGLWIGYSFVMHTGAG PSGGGQALSSPGSCLEDFRATPFIECNGARGTCHFFANKYSFWLTTIGQNQQFRTPVSET LKAGDLRSRVSRCQVCAKVVRSF NT seq 5292 nt NT seq  +upstreamnt  +downstreamnt atggatttaagattgcttggcttgttgatattcctttctgtgaacagtctttcaagttta gtagatgggcagcggaatcgatcagagccagaatgtggaggctgcacaacaagtaatgga tgtaaatgtgttggagaaaaaggatcaagaggttttccaggaccccctggcccccagggt ccacagggtaatacagggtttgagggaccagagggccttattggacctaaaggtgtaaaa ggagagccagggtctccaggaatcctgggccctaaaggggatcggggtaaaatgggtatg cccggttttccaggtatcagcggtattccaggcctacaaggtccccctggtcctagaggt cctgctggtttagatggatgcaatggaacacagggagagccaggtgtacctggacgacca ggagagcctggattggaaggcccaccaggttttgatggattgaaaggagtgaagggagag cccggttcagcagttgaaggattcaaaggacagaagggagaatcaggaccgtctggaatt cctggtgcaccaggtttgaatggaaatgatggccagccaggattgccaggagaccttgga ccaagaggatacccaggtcccccaggtattccaggaaagccaggtcagaaaggaaacatg ggtatcaattacaagcctgagaagggagaaaaaggagcccgaggtcctaagggtatccct ggaccacccggaactactaaattaccgtttactggaaataatgaaacattgcaaggtgct ccgggtgaacctggtatgaaaggtcagaaaggagaatctggaccgtcaggaccacgtggt ttcccaggagctgatggacttcctggtcgaattggagagccaggtatgcatggagaaaag ggtgttccaggaattgctggaccgaggggaaaacaagggttgccaggtatcccaggattc acaggaccaaagggtgaccgtggaatggacggattaccaggactatcaggcctgccagga atgaagggagaaaggggctacgaaggaatgaagggtaatgttggacccagaggaccacag ggacctccaggtggtcctggtggtggtgacggcccagttggagacccaggtccgattggt cctagaggtcctagtggagaagatggacttccaggactgccaggtgcacgtggtgaacct ggaattcagggtccccgtggagggccaggtattccaggcccccctggtcctcagggaaat gacggccccccgggagagaaaggagaccaagggcttcaaggattccctggacttgatggt ttaccaggacagcctggttaccctggtgctaaaggtgaacaaggtattaaaggagaagct ggaaggtctattcttggtgaaccaggtcgcccaggtgagccaggacgtgatggatttcca ggtgcgaagggagatagtggtcccagaggtttacctggattgcctggaaactcttcagtt ggtcgaccagggttgccaggtgccaagggagacattggtccaagaggtaaccctggactg gatggtttgcctggtttacctggacgtgacggtcccaagggagatactggagggacctgt aatctctgtcagaatggcttcaagggagaaaagggagagtcaggattgcctggacgtcct gggttgtcaggtgaacgaggaccagaaggacccccaggtgagaagggagcacctggatat gatggaactccgggacagcaaggaccccagggacggcctggagagaaaggacttccaggt ttagctggattgaaaggtgaacgggggaaggatgctcaaatgcctaatgaatggataaaa ccacctaaaggagagcagggaccgccagggctcccgggtttgaatggagaacgtggaccc tcaggtcctccgggaccacgaggaccccaaggactggatggaatacagggtgaaaaggga gcacctggatttgatggtatacctggacgaccaggtttaaagggcgaaagtggccagcct ggtagaaaaggagaacctgggtttggaatgcccggtgcaccaggagagcgaggggaacca ggacagccaggtctgccaggacttccaggaatgaagggagataagggtatttcaggtgaa accatctttattggcaatgaacttaagggaactaaaggtgaccgtggaccagctggcccc cctggattaccagggttagatggtatttcaggagtgaagggtcagtctggggaaccaggc cttcaaggacttgatggcttgccaggaagaccaggggaaccaggcttggatggaagacct ggagagccaggaccaagaggtttgactggtccccgaggtgacaaaggagaaccaggtgtt gctggactaccaggatttgatggacctcagggtgagccaggaatttcaggactgcccgga ctgcaaggtgaaaagggagatgccggtttaccaggaaatgctgtagttggacctaaagga gagcctggagtcttcggtgaacctggagtgccaggattacctggacgcaaaggagaacga ggtttgcctggcctggatggccttcctggtatgaaaggaaacccaggtttaaacggtgga ccaggacttgatggactcccaggcgcaaagggagagcccggaccagttggacctagagga ttgtctggagagccaggagaacctggtctccctgggctaccaggatctgtgggattgaag ggagagcctggggttccaggcgtacctggacttcagggagagaaaggagtaagaggaaat gatggtatacctggtagggatggtctgcctggtcttgatggagccccgggcccaagaggt ccagatggagatgatggactaccaggattaccaggagctaagggcgatgttggcgtggta ggtttcccaggagagcccggacgtgatggactaccaggtttgccaggggccagaggtaca aaaggtgatcgtggtttcccaggacgtgatggagagcctggactctctggacgaccagga gagaagggtgactctggactgcctggtttgccaggtatggacggggaaccaggtcagcca ggtcttcctggtatgaagggtgagtcaggacagccaggtctagatggtcttccaggttct agaggatttgatggaaccccagggttaccaggtatgaaaggtgagcaaggacagccaggt attggcctaccaggagacaggggttacccaggagagcctggtcgtgatggactggatgga ctcccaggacaagcaggacagaaaggagaacctggagtaccagggttcaatggaatgaag ggagaaaggggaattgatgggttaccaggaaattcaggcttacctggtcttgatggatta cctggaatgaaaggaaatgctggtttgccaggccgacctggagagccaggtgctccaggt gatgatggacgtccgggtctagatggtgtgccaggtgccaagggtgaatcaggtctgcca ggacgttcaggactacctgggttggatggtatgaagggagagagaggattcccaggacca gagggaccttcaggtgaaccaggtttaccaggaatgaagggtgattctggactaccaggg ttgccaggactacagggacgcaagggggatccaggcttcccaggtgaaccaggacgtgat ggtttcaagggtgagccaggattcccaggtagagatggagagccaggagtcccaggagag aaaggagacagaggtttgaatggtatacccggacgtaagggagaacccggccgggacaca gttggtcttaagggagagccaggtccaagaggtctaccaggtttagatggactaaggggc cagaagggtgaatccggtcctagtggtagagatggattcccaggtgctaagggagaacca ggtataccaggcgagggtcttccaggtatgaagggagaaccaggattcccagggagagaa ggtgaacctggcttgagaggtgaacctggagaagatggattgccaggtgctccaggacgt aagggtgatcgaggagatgctggtctgcctggaccaccaggagaggacggacttagaggc atttctggagaaaaaggagaaccaggaataccaggtgtccctggtttaatgggtatgaag ggagagccgggattgattggaattcctggaccaattggacctaaaggagagcctggattc cctggacgtaatggtgaaaaaggagacagaggatacgatggagaaaaaggagcccgaggt gacccagctcctcagaattatctcaagggagaaaagggagatcgaggacctgaaggtttc ccaggagttagtgggcttccaggacctcagggagagccaggagaaccaggacggccagga ccacgtggaccccaaggtgacataggtgtcccaggatacccaggaagtaagggagatata ggtgatagaggtttcaatggacaacctggacaggatggtcttgatggtccaagaggtcca cagggtctgcagggtatccccggtaatccaggctatgtaccaccagttggcttcctcatg acaaagcacagtcagtctagaaatgttccaaattgtcctgatggtatgggcaaaatgtgg gaaggatacagtcttttgtatgttgaaggaaatgaaaggtcacatcaccaagacttagga tgggctggttcctgtatacgtagatttagtacaatgccattcttattctgtggtaccgat aatgtgtgcaattacgccagcaggaatgacaaatcatactggttgtctacaaatgctcca atgccaatgatgcctgtaggggagactgatatccaaccgtacatcagtagatgcgtggtt tgtgatgccccatctaatgtaatggcagtacacagtcagacactgactattccagattgt cccgttggatggaatggcctttggataggatacagctttgtcatgcatactggtgctggt ccaagcggaggtggtcaagcattatctagtcctggcagttgtttagaagatttccgtgct actccatttatagaatgtaacggagctaggggcacctgtcatttctttgccaacaaatac agcttctggttaacaacgataggacaaaatcagcaatttagaacacccgtgtcggagaca cttaaagctggtgatcttcgctcacgagttagtagatgtcaagtttgcgcaaaggttgtc agaagcttttaa

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