Mercenaria mercenaria (northern quahog): 123553874
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Entry
123553874 CDS
T07835
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12-like isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123553874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmer04121
]
123553874
Enzymes [BR:
mmer01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
123553874
Ubiquitin system [BR:
mmer04121
]
Ubiquitin ligases (E3)
HECT type E3
123553874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
TRIC
Motif
Other DBs
NCBI-GeneID:
123553874
NCBI-ProteinID:
XP_045199518
LinkDB
All DBs
Position
7:complement(77376740..77442850)
Genome browser
AA seq
2215 aa
AA seq
DB search
MADPVDCQSSGGSKQHTRKTGARHTNREISSPAIARRTRSRDRQSEDTEVTIKQEKPVRE
GSREKKFGINVNQNLNANSSESSTEFSTQRRRRSSSGSSKSKTSLQSNSSTKVDRGRKRS
QSEESVGVLSTSPPGSSGTKGRDRSASGVFSERSGVNSSCAKSSASSASVKNSSSKSSSR
SRKRSGPVSAASSSLSSIDLETASAVSSRSSKVSVSSSKTRSNSGSSLTSVSSEGLLTGN
CEKCRLVKKARKGKETEVRVKSTRTWSVSVADIPNTECTSHNISSGKSSASSLFSDTFKG
KIEECGTGQTLSRSIKQSLRPSTQAQSRAEVGTYRVSRKRSNVAKSSTSVVEPVAKCSKV
ESRTDSDIKLEKKIEVSVTNHGIHEQALPASFIIAGTSYSRDNNPTQPPKKKSKLDKKAK
KKDKSSHKLESPKGATGSSTSKSSPPELNSLRRHTRAKKTGSCASSSGRQSSSLSKRHQQ
GRTNPPTAQGSGSTVAASCSTSGGGIAKPLSALMSDSENSVSGGGGPSKTPQDDNTQSTG
LAPSTGGATAMTSESESEEADMGRLQALLEARGLPSQLFGALGPRMHQLLHRTMGSNSSM
NKAQQLLQGLQATGNEDQQLSAVIEMCQMLVMGNEDTLAGFPVKQVVPALITLLQMEHNF
DMMNHACRALTYMMEALPRSSAVVVDAVPVFLEKLQVIQCMDVAEQALTGLESLSKKHSK
AILQAGGIAACLMFLDFFSINAQRCALAITANCVLNMTSEEFHYIRDSVPLLSARLTHQD
KRSVESVCLCFARLVDNFQNDRRILKEIAVQGLLTNIQQLLVVSPPVVSTGTFVMVIRML
AIMCGNCPDLAVVLLRQKVADTLCYLLVGTSEEATKSIELVSRTPQELYEIVCLIGELLP
VLPSDGIFAIDNLMRKGSLTHVDAVIWQWKDDRNMWHSYSPIDSKIIEAAHQSGEDEVSL
STMGRAYTIDFSTMQQINEDTGTARNVQRKPNPFASTNTQSSSGSSSETDLERCDSRAEV
LKEDTDLASSFIKTLFSVLYEVYSSSAGPTVRHKCLQTLLRMIYYSSADLLKDVLKSQPV
SSHIAAMMASQDLKVVVGGIQMAETLMQKLPDIFNVFFRREGVMHQMKKLSEIDPQAVTP
VKPPQPQQSPLSSGSLVSISSSGTSCSAGSAEADKKELDMCLSLAEGSSSTSTDDHETGA
TQMRLSDVLKRKKPPKRPARKNNKNDDSPEVDKKALGVGRSSRSKGSSKEKSSSSSSSKM
SFLPSLNPRSWGKLGSSSSSSSSSDRPLLSKYSSLKPVQPALPNNKDKIKTWIKEQATRF
LEQYFSEEAQPGSHPALSTLNKLCTATENLSLEDDVGMEALLDISVIMKDSDVSPFEVIH
SGLVKKLLLYLTSMEGTVPRDVRIRRFLHVFLNCPSPDIVHLKEINMPDSEVPCSMLPLV
QKLMACLHQLEQFQVKVHDLPGGNSSTGRGSNALKFFNTHQLKCLLQKHPSCNTLKQWKG
GPVKIDPLALVQAIERYLIMRGYGRQKDADDDGSDDDNSDEDLDDTMAAVFISQGQARHR
LEFLIGDRVLPYNMTVYQAIKQYSNCPDREGSETDTDTENPVGHASIWVQTHTIWYRPAP
ESDESVVTSPKKTKSETKAAKSSHKRKSEDLWTESEFSISADGSCPVIVPALNAYLTEKL
PAFVTVQDASLEVIALLRILHAFNRYWSTVYEVPSYYAKPILSKSEFISSKLMAKANRQL
QDPLVIMTGNLPTWLAEIAAAAPFLFPFDTRQLLFYATTFDRDRALLRLQDNSVDTTAND
SSDRVAPRLDKRKRMVSRTDLLKQAEKVMEDLASSRAMLEIQYENEVGTGLGPTLEFYAL
VSRDLQRADLELWRGDAVVEKDSSGIETGNQYIYSPCGLFPVPLARNTKATVVNRMKAKT
KFMGKLMAKSLMDSRMLDIPFSRVFFKWLLGQEHSLTSSDLQYVDQVVSKSFNQLEDILR
QKQRILADKSHTEESRRLALDNLTMDGCSIEDLDLDFTLPGYPNIELKKGGKDKHVTLEN
LEEYLQLVTHWSLVEGVSRQFESLREGFESVFPLSSLQSFYPEELELLFCGHNEELWDAK
VLMECCRPDHGYNHDSRAVKFLYEILSSYTPDEQRMFLQFVTGSPKLPVGGFRSLSPPLT
IVRKSFESSENPDNFLPSVMTCVNYLKLPDYSTVEIMRDKLHLAASEGQLSFHLS
NT seq
6648 nt
NT seq
+upstream
nt +downstream
nt
atggccgatccagttgattgtcagtctagtggggggagtaaacaacacacacgcaaaaca
ggggccagacacacaaatagagagattagcagtccagccatagcaaggcggacaaggagt
agggataggcaatcagaggacactgaggttacaatcaagcaagaaaaacctgtcagggaa
ggctcaagagaaaagaaatttggaataaacgttaatcagaatttgaacgccaattcatca
gagagctctacagaattttctacacagagaagaaggagatctagttctggtagttctaaa
tctaaaacttctctacagtcaaactctagtacaaaggtagacaggggtaggaaaaggtca
caaagtgaagaaagtgtaggtgtattgtcaacatcaccaccaggtagtagtgggacaaag
ggcagagataggtctgcctcgggtgtgttcagtgaaagaagtggagttaattcatcttgt
gcaaagtcatctgcaagttcagcatctgttaaaaattcttcatcaaagtcatcatcaaga
tctagaaaaaggagtggtccggtgtctgcagcatcaagttctttatcaagcattgactta
gagactgcttcggcagtatcatcacgttcctctaaagtttctgtgagctcttcaaagaca
aggagcaatagcggctctagtttaacatctgtgtctagtgagggtctgctgactgggaat
tgtgaaaagtgtagactggttaaaaaagctagaaaaggaaaggaaactgaggttagggtc
aaatccactagaacttggtctgtaagtgtagcggacattcctaacactgagtgcacttca
cataatatatcatcaggaaaatcctcagcgtcatcgttgtttagtgatacatttaaaggt
aaaatagaggagtgtgggactggtcagactttatcaaggtcaataaaacaaagtcttagg
ccaagtacgcaagcacagtcacgtgctgaggtgggaacataccgtgtgtctcgtaaacgt
tcaaacgtagcaaaatcatcaacttctgttgtagaacctgttgctaagtgcagcaaggtg
gaatctagaactgacagtgatattaagttggagaaaaaaatagaagtcagtgttactaat
cacggtattcacgaacaggcattgccagctagttttattattgctggtactagttattct
agagacaataacccaacacagccaccaaagaaaaaatccaagttggataaaaaggcaaaa
aagaaagacaaaagttctcacaaattggagagtccaaaaggtgctacggggagttctact
tcaaagtcatctccgccggagctgaacagcttacggcggcatactcgggcaaagaagacg
ggctcctgtgctagtagtagtggtcggcagtcttcttcactgtccaagcgtcaccagcaa
ggtcgtactaatccaccaacagcccagggatctgggtcaactgtggcagcaagttgtagt
acgagtggagggggaatagccaaaccactatcagcactcatgtcagacagcgagaactct
gtgtcgggagggggaggtccttcaaagacacctcaagatgataatacacagtcaacagga
cttgctccaagtactggaggtgcaactgcaatgacgtcagagagcgagtccgaggaggct
gatatgggcagacttcaagctttactggaggcaaggggtctgccatcacagctgtttgga
gcacttggtcccagaatgcaccagttactacacagaacaatgggcagtaatagttcaatg
aacaaagcccagcagttgttacagggtttacaggcaacagggaatgaagaccagcagctg
tctgctgtcattgaaatgtgccagatgttggtaatggggaatgaagacacattggcaggt
ttcccagtgaagcaagttgtaccagccttaattacactgctacaaatggaacacaacttt
gatatgatgaatcatgcctgtagggctctcacatacatgatggaagcccttcctaggtcc
tctgcagttgtcgttgatgcagtaccagtgtttttagaaaagttacaagttatacagtgt
atggatgtggcagaacaagccttgacaggcctggaatcactgtcaaagaaacacagcaag
gccattttacaagctggaggtattgcagcatgtttgatgttcctggatttcttcagtata
aatgcccagcgttgtgctctagcaatcactgccaactgtgttctcaatatgaccagtgaa
gagttccactatatcagagattctgtaccgttgctgagtgcaaggcttacacaccaggac
aagaggtctgtggaaagtgtgtgcctgtgttttgctcgccttgttgacaatttccagaat
gacagaagaatactaaaggagatagctgtacagggtcttctcacaaacattcagcaactg
cttgttgtgagcccaccagttgtaagcactgggacgtttgtaatggtgatacgtatgctg
gccataatgtgtggaaactgtcctgaccttgctgtcgtcctacttagacagaaggttgct
gatacactgtgttatctacttgttggaacttcagaagaagctacaaagagtatagaattg
gtctctagaactccacaggaactttatgaaatagtttgtttaataggggagttgctacca
gtgttgccatcagatgggatatttgcaatagataatttaatgaggaaaggatcactgacc
catgtggatgctgtcatctggcaatggaaggatgatagaaacatgtggcattcttactct
cccatagacagtaaaatcatagaggcggcccatcagtcaggtgaagatgaagtaagtcta
tcaacaatgggccgagcgtatacaatagacttcagcacaatgcaacaaatcaacgaagac
acaggaactgccagaaatgtacaaagaaagcctaatccatttgcatctacaaacactcag
tctagctctggttcaagttcggagacagacttggagcgttgtgattccagagcggaagtt
ttaaaggaggatacagatctggcctcgtccttcatcaaaacattgttttctgttttgtat
gaagtttatagctcatcagctggacctacagtacgacacaaatgtctccagacgttatta
cgtatgatatattatagcagtgctgatctcttgaaagatgttctcaaatctcaaccagtc
tctagtcatatagcagccatgatggcatcccaggatttgaaagttgtagttggtgggata
cagatggctgaaactctgatgcagaaactaccagatatatttaatgtgtttttcagacga
gaaggtgttatgcatcagatgaagaaattaagcgagattgaccctcaagctgtgacccca
gttaagccccctcagccccagcagtcccctctcagctctggttccctggttagcatcagc
agtagtggaaccagctgtagtgcagggtcagcagaagcagataagaaagagctggacatg
tgtttaagtctggcagagggttcgtcaagtacgtctacagatgatcacgaaactggtgct
actcaaatgagactcagtgatgttctgaaacgaaagaaacctccaaaacgacctgcgaga
aaaaataacaagaatgatgacagtccagaagtagataaaaaagcattaggtgttggtcga
tcaagtcgtagtaaaggctcgtcgaaggagaagagtagcagtagttcatcatccaaaatg
tctttcttgccgagtttgaacccacgaagctggggaaagcttggtagttcatcatcgtca
tcatcatcctcagatagacctctcctatccaagtattctagtctcaaacctgttcaacct
gctttaccaaacaataaagacaagattaaaacttggataaaagagcaagccacaaggttc
ttagagcagtatttctcagaagaggcccagcctggcagtcatccggctctgtcaacattg
aacaaactgtgtacagctacagagaatctcagtctggaggatgatgtaggaatggaagca
ttactggatatatctgtgataatgaaagatagtgacgtttctcctttcgaggtgatacac
agtgggcttgtgaagaagttgctgctttatttaacatcaatggaagggacggttcctcga
gatgtcagaattagacggtttcttcatgtcttccttaattgtccttctccagatattgtg
catctgaaggagatcaacatgcctgacagtgaggtgccgtgttctatgttaccccttgta
cagaagttaatggcttgtttacaccagctggaacaattccaagtcaaagttcatgaccta
cctggtggcaattcttcaactgggagaggctcaaatgctctcaagttctttaacacacat
cagcttaagtgtttgctgcaaaagcacccatcttgcaatacattgaaacagtggaaagga
ggtccggtgaagatagatcctcttgcacttgttcaagctatagaaaggtacctgatcatg
agaggctatggtagacaaaaggatgctgatgatgatggtagtgatgatgacaactctgac
gaagatctggatgatactatggctgctgtgtttattagccaaggtcaagcacggcacaga
ctggagtttctgatcggagatagggtgttgccatataacatgactgtgtaccaggcaata
aaacaatacagtaactgtcctgacagggagggtagtgagacagatacagatacagaaaat
cctgttggtcacgctagtatctgggtccagacacatacaatttggtaccgtccagcccca
gagtccgatgagtccgttgttacaagtcccaagaaaacaaaatcagaaactaaagcagca
aaatcaagtcataaaagaaaatcagaagatttgtggactgagtcagagttttctatttct
gcagatggaagttgtcctgtgatagttccagcactgaatgcttacttgacagaaaaactg
ccggcgtttgtaacagtgcaagatgcttcccttgaagttatagccttactgaggatacta
catgcatttaatagatactggtccactgtttatgaggtgccgtcatattacgcaaagccc
attttgtcaaaatctgagtttatcagttcaaaactgatggcgaaggcaaacaggcagcta
caggatcctctggtaataatgacaggaaatttaccaacttggctggctgaaatagcagct
gctgcaccattcctgttcccatttgacactcgtcagttgctgttctatgcaaccaccttt
gacagagatagagccctgttgaggttacaggataactctgtagacaccactgccaatgac
tcaagtgacagagtcgcccctagattagataaacgcaagcgtatggtcagtagaacagat
ttgctcaaacaagctgagaaggtgatggaagacttggccagctcaagggccatgttagaa
atacagtatgaaaatgaggttggtactgggttaggaccaactttagagttctacgccttg
gtgtcacgagatcttcagagagcagacttggagctatggagaggagatgcagtggttgaa
aaagattcttcaggtattgagaccggtaaccagtatatttactctccatgtggattgttc
cctgttcctcttgcaagaaatacaaaagcaactgtggtaaacagaatgaaagcaaagacc
aaatttatgggaaagttgatggcaaagtctcttatggactccagaatgctggacattcca
tttagccgggttttcttcaagtggttgctgggtcaggaacacagtttgacgtccagtgac
ttacagtatgtagatcaggttgtctcaaagtctttcaatcagttagaggatattctacga
cagaaacagaggatcctagctgataaatcgcatacggaggagagtcgcagattggcactg
gacaatctcaccatggatggatgcagtatagaagatctcgacttagatttcaccttgcca
ggatacccaaatatagaactgaaaaagggtggcaaggataaacatgtgacattagaaaat
ctggaggagtatttgcagttggtgacccactggagtttggtggaaggtgtatcacgacaa
tttgagtcactgagggaaggatttgagtctgtgttcccactgagttcactgcaaagtttc
tatccagaggagttggagttattattctgtggacacaacgaagaattgtgggatgccaaa
gttttgatggagtgctgtcgcccagatcatgggtataatcatgacagtcgagcggtgaaa
tttctctatgagatactcagttcttatacaccagatgaacaaagaatgtttttgcagttt
gtgacagggtcaccaaagttgccagttggaggtttccgaagtctgagtccaccactgaca
attgttcgcaaaagttttgaatcctcagaaaatccagacaattttcttccgtcagtaatg
acatgtgttaattatcttaaactgccggactattccaccgtggaaatcatgcgtgacaaa
cttcaccttgctgctagtgaaggacaactctcattccacttatcatga
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integrated database retrieval system
