Mercenaria mercenaria (northern quahog): 123554188
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Entry
123554188 CDS
T07835
Name
(RefSeq) general transcription factor IIF subunit 2-like
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123554188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmer03021
]
123554188
Transcription machinery [BR:
mmer03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
123554188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
Ino80_Iec3
Motif
Other DBs
NCBI-GeneID:
123554188
NCBI-ProteinID:
XP_045200091
LinkDB
All DBs
Position
7:complement(49156753..49374190)
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AA seq
265 aa
AA seq
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MTSVKEEPTSKQVRDVDLTAAGRGVWLVKVPKYLSEKWKKASGKCEVGRLMITRSKVPNT
MPEVTFSMNDAQMKQEVPGQPNATPKDHKFRLTGVGNQNLVVFSEDRATPPGPSAEEITE
KIAIEGKVIQRAECRPAAIADMSYLKLKKQQMVSSNKPQREIKQISTIVPKYKPISNHPS
EIAHQKKMKEEGKRIRQDKDQVMDKLFEIFEKHQYYNIQDLVRLTSQPITYLKEILKEIC
IYNVKAPHKNMWELRPEYRHYKDPK
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctgtgaaagaggaacctaccagtaaacaggttcgcgatgtagatctcactgct
gccggtcgtggggtgtggctcgttaaggtcccaaaatatctgtcggaaaaatggaagaag
gcatctgggaaatgtgaggttggaaggctaatgataacaagatctaaagtaccaaataca
atgccagaagtgacattttcaatgaatgatgctcagatgaaacaagaagtacctggacag
ccgaacgccacacccaaggaccataagtttcggttgactggtgtcggaaatcaaaatctt
gttgtgttctcagaagatagagcgactccacctggaccgtcagcagaggaaatcacagaa
aagatagcaattgaaggcaaggtaatacagcgagcagaatgtcggcctgcagcaatagct
gatatgagttatctaaaactgaaaaaacaacagatggtatcaagtaataaaccacagaga
gaaatcaaacagatatcaacaattgtaccaaaatataaacctatcagtaatcacccgtct
gagattgcccatcagaaaaagatgaaagaggaaggaaagagaatacgacaagacaaagat
caagtaatggataaactgtttgaaatatttgagaaacatcagtattacaatatacaggat
cttgtcaggcttacaagtcaaccaataacctacctgaaggaaattctgaaagagatctgt
atatacaatgtgaaggcacctcataagaacatgtgggagttacggccggaatacagacat
tacaaggacccaaaatga
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