Mercenaria mercenaria (northern quahog): 123554193
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Entry
123554193 CDS
T07835
Name
(RefSeq) transcription initiation factor TFIID subunit 9B-like
KO
K14535
transcription initiation factor TFIID subunit 9
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123554193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmer03021
]
123554193
Transcription machinery [BR:
mmer03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123554193
Coactivators
SAGA/TFTC/STAGA complex
123554193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID-31kDa
CENP-S
CENP-T_C
Histone
Bromo_TP
CBFD_NFYB_HMF
TAF10
LonB_AAA-LID
TIP49_C
Motif
Other DBs
NCBI-GeneID:
123554193
NCBI-ProteinID:
XP_053403144
LinkDB
All DBs
Position
7:49461616..49489360
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AA seq
261 aa
AA seq
DB search
IRSRKFILYELLTTEMSTLPVKSSPRDAQVMAAILKDMGVTEHEPRLINQMLEFTYRYVT
DVLDDAKVYSTHANKKTIDTDDVQLAVQCRMDHSFTTPPPRDLLLEIARHKNAQSLPLIK
PYSGPRLPPDRYCLSAPNYKLVSNKKKLHRIPIGLPGNPLTGGHRISLTPVQKQQTGKIQ
IGTPTQPLAVINRPSQVKPIVRVQQGPGLMPGHTNTGGSLVQTQIMTTNQPVTMVPALSG
QTLLQNINPLKRKMDDDDYDT
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
attcggtcacgtaaatttattttgtatgaacttttaactacggaaatgtcgactcttcca
gtgaaaagttcgccgcgagatgcgcaagttatggctgcaatattaaaagacatgggtgtt
acagagcatgagccaaggctaatcaaccaaatgctcgaatttacgtaccgttatgttaca
gatgttttggatgatgctaaggtttattcaactcatgccaacaagaaaactatagacaca
gatgatgttcagttagctgtacaatgccgtatggaccattcattcaccacacctccacca
agagatctgctacttgagatagcgcggcacaagaatgcacagtcacttccactgatcaag
ccatactcgggtcctcgtctaccaccagacagatactgcctctctgctccgaactacaaa
ctagtcagtaataagaaaaagttacacagaattcctattggtcttccgggaaatccacta
acaggtggtcacagaatctcactcacaccagtacagaaacagcaaactggtaagatccag
attggtactccaacgcagccacttgcagtgataaacagaccatctcaggtgaaacctata
gtcagagtacagcaaggtccaggattgatgccaggtcacacaaacactggtggcagcttg
gtacaaacacaaataatgacaacaaatcagcctgttaccatggtacccgctttgagtgga
cagactcttctacagaacataaatccactgaaaaggaaaatggacgatgatgattatgat
acttga
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