Mercenaria mercenaria (northern quahog): 123554210
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Entry
123554210 CDS
T07835
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit DKC1-like
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123554210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmer03009
]
123554210
03032 DNA replication proteins [BR:
mmer03032
]
123554210
Ribosome biogenesis [BR:
mmer03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
123554210
Prokaryotic type
123554210
DNA replication proteins [BR:
mmer03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
123554210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
UPF0113
DUF5073
Motif
Other DBs
NCBI-GeneID:
123554210
NCBI-ProteinID:
XP_045200127
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All DBs
Position
7:complement(50420296..50449310)
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AA seq
507 aa
AA seq
DB search
MEDGHKKKKHKSVDVAETQHNADFLIQPSSEVQKLDTSQWPLLLKNFDKLNVKTGRYTPI
PSGCSPLKRPIEEYVKSGFLNLDKPSNPSSHEVVAWVKRILRVNKTGHSGTLDPKVTGCL
IVCIERATRLVKSQQGAGKEYVCIYRLHSVVEDEKRVLRNLETLQGALFQRPPLISAVKR
QLRIRTVYEVKSLEYKKEDAMGVFWVSCEAGTYIRTMCVHLGLLLGVGGQMQELRRVRSG
IQNEKVGMVTLHDVLDAQWMYDNHKDESYLRRVIKPLEALLTSHKRIVIKDSAVNAVCYG
AKIMLPGVLRYENGIEIDEEIVIVTTKGEAVALAIAQMTSAVMATTDHNIVAKIKRVIME
RDTYPRKWGLGPRAMIKKQMVKEGKLDKYGKPNDKTPKAWMEILKKSGDLGEGADIKPDI
NNIEQAQTPLKRKHESGSSSDEGANVSSMSSPKTPTAGGDSHKKKKKKKIKEEPVSGDEQ
PVEETEPTSEKKKKKKKKHKKEAADSD
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggtcacaaaaagaaaaagcataagtcagtagatgttgctgagacacagcat
aatgcagattttctcattcaaccttcctctgaagtacagaagttagacacatcacagtgg
ccccttctattaaagaattttgacaaacttaatgtgaaaacaggaaggtacacacctata
ccatcaggatgttctccattgaaacgtcccatagaagaatatgtaaagagtggcttttta
aatctcgacaaaccatcaaatccctcatcacatgaagttgtagcttgggtgaagagaata
ttgcgtgtaaataaaactggacatagtggaacattagatcccaaagtaacaggttgtctg
attgtatgtatagaacgtgcaacaagactcgtaaaatctcagcagggtgccggcaaggag
tatgtttgtatttacagactacatagtgtggtggaggatgagaaaagggttttaaggaat
ttggaaacattacaaggtgcattatttcaaagacctccattgatatctgcagtaaagaga
cagttaagaattagaacagtttatgaggtgaaatcattagaatacaagaaggaagatgca
atgggtgtattctgggtcagctgtgaggcaggcacatacattcgtaccatgtgcgtacat
ctgggacttctgctcggagttggaggccagatgcaagaactgcggcgggtccgatcaggc
attcaaaatgagaaggttggtatggtgacactacatgatgtccttgatgctcaatggatg
tatgataaccataaagatgagagttacctcagacgtgttattaaacctctagaagctctc
ctcacatcacataagcgtattgtgataaaagattctgcagtgaatgctgtctgctatgga
gcaaagataatgttaccaggtgtgttaaggtatgagaatggtatagaaatagatgaggaa
atagtcattgtaacaactaaaggcgaggcagtagcattagcaatagcccagatgacatca
gccgtgatggcaacaacagaccacaatattgttgcaaagataaaacgtgtgatcatggag
agagatacatatcctaggaaatggggactgggaccaagggctatgattaagaagcagatg
gttaaagaaggtaaactggacaaatatggaaaaccaaatgacaaaacacccaaagcttgg
atggaaatattgaagaaatctggggacttgggagagggggcagatatcaaaccagatata
aacaacatagaacaggcacaaacacctcttaagaggaagcatgaatcaggcagtagttca
gatgaaggagcaaatgtttcatcaatgtcttcacctaaaacaccaacagctggaggtgac
agtcacaaaaagaaaaaaaagaaaaagataaaggaggagcctgttagtggagatgaacaa
ccagttgaggagactgagccaacttcagagaaaaagaagaaaaagaaaaagaaacacaag
aaagaagctgcagactctgattga
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