Mercenaria mercenaria (northern quahog): 123554369
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Entry
123554369 CDS
T07835
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer00061
Fatty acid biosynthesis
mmer00071
Fatty acid degradation
mmer01100
Metabolic pathways
mmer01212
Fatty acid metabolism
mmer04146
Peroxisome
Module
mmer_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
123554369
00071 Fatty acid degradation
123554369
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
123554369
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mmer01004
]
123554369
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmer04147
]
123554369
Enzymes [BR:
mmer01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
123554369
Lipid biosynthesis proteins [BR:
mmer01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
123554369
Exosome [BR:
mmer04147
]
Exosomal proteins
Exosomal proteins of breast milk
123554369
Exosomal proteins of breast cancer cells
123554369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
HTH_26
Motif
Other DBs
NCBI-GeneID:
123554369
NCBI-ProteinID:
XP_053404171
LinkDB
All DBs
Position
7:complement(41063911..41088831)
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AA seq
710 aa
AA seq
DB search
MADIFLHLVFGVFKAVTLVYNIVTFVPYYVVCQPGEKLKRSNRLKAKRIEESPDSPYRAV
DVALKELTTTPFPECRTLDDLFIRAVRIYGGKKCLGTREVLREEDEKQPNGKVFKKVILG
EYNWISFEEVFTRITNLGSGLLALGQKPRCNTLIYAETRAEWMIAAQACFKYNFPVVTLY
ATLGVDALVHGINESEVSYVITSAELLPKFQGILDQIPKVSHLIVMCDEQKISKKDFPSH
INILTFAEVELIGAEPDNIRTPVTKPSRDDTAVIMYTSGSTGKPKGVIISHGNLMSGMSG
QCQRIEGLGPHDTYIGYLPLAHVLELSAETASLSHGVAIGYSSPLTLTDQSSKIKKGSQG
DISVLKPTLMAAVPVIMDRLYKGVWDKVKSGSPFSRALFQFAYEYKKNSLEKGYDTPVFN
KILFSKIRQLLGGELRMMLSGGAPLSEKTQRFMNICFCCPVLQGYGLTETCGAGTVCDVN
DMSTGRVGPPVTCCEIRLRNWQEGNYLNTNKPYPQGEILIGGGNVVQGYYKNKEKTEEDF
TVIDGLQYFCTGDIGQVEKDGSLRVIDRMKDLVKLQHGEYISLSRIETALKMCPLVEQIC
IHANSSQSVCIALIVPSQKNLTELAKKIGITGKEIEDLCEDEKVEKEVLKELATAGRKAK
LEKFEIPSKLKLCPEPWMPDTGLVTDAFKLKRKNIEETFKPSLQRMYSFA
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggcagatatttttctccacctggtgtttggcgtgtttaaggctgtgacattggtgtac
aacattgtaacgtttgttccatactacgtagtgtgtcagccaggagaaaagctgaaaagg
tcgaacaggctcaaggcaaagagaatagaagagtctccagattcaccctatagagctgta
gatgtagctttaaaggaactaactaccacaccttttcctgaatgtcgtacactagacgac
ctatttatacgtgctgttagaatttacggaggaaagaaatgtctcggtacaagagaagtt
ctacgagaagaggatgaaaaacaaccaaatggaaaagtctttaaaaaggtcattttaggt
gaatataactggatatcgtttgaggaagtgttcacacgaattaccaacctgggcagtggt
ctgttagctttaggacagaaacctcggtgtaacactctcatttatgcagagaccagggct
gaatggatgatagcagctcaagcatgctttaaatacaacttcccagtggtgacattgtat
gccacactgggagtagatgctctggtgcacggtatcaatgaaagtgaagttagttatgtg
atcacatcagcagagcttctaccaaagtttcagggaattttagaccagattccaaaggtt
tctcacctgattgtgatgtgtgatgagcagaaaatttcaaagaaagactttccgagccat
ataaatatactgacctttgctgaggtggaactgattggtgccgagccagataacattaga
acaccagttacaaagccatcgagagatgatacagctgttattatgtatacatctggttct
acaggaaaacccaaaggtgtaataataagccatggtaacttgatgtcaggaatgtcgggt
cagtgtcagaggattgaaggtctgggaccacatgatacatacattggatatctacctcta
gctcatgtgcttgaacttagtgcagaaactgcctccctgtcacatggtgtagccatagga
tactcctctcctctcacactcactgaccagtccagtaagatcaagaaaggaagtcaaggg
gatattagtgttctcaaacctacactgatggctgctgtacctgttattatggaccggctg
tataaaggtgtatgggacaaggtgaagtctggcagtccattcagccgtgctctcttccag
tttgcctatgaatacaagaagaactctctagagaaaggatatgacacacctgtttttaac
aaaatcttgttcagtaagatacggcagttgttgggtggagaactgaggatgatgttgagt
ggaggtgctccattgtcagagaaaacccaaagattcatgaacatatgcttctgttgtcca
gttctccaaggttacggcctcacagagacctgtggtgcaggaacagtttgtgatgtgaat
gatatgagtacagggcgtgtgggaccaccggtaacttgttgtgaaatccgactgagaaat
tggcaagaaggaaactacctgaacaccaacaaaccctatccacaaggtgagattctgata
ggaggagggaatgtagtacaggggtactacaagaacaaggaaaagacagaagaagatttt
actgtcattgacgggttacaatacttctgtacaggtgatatagggcaggtggaaaaagat
ggcagtcttagggtgatagatcgtatgaaggacctggtcaagcttcagcatggagagtac
atatctttgagcaggattgaaacagccttaaagatgtgccccctggtggaacagatctgt
atccatgccaacagttctcagtctgtatgtatagcgctgattgtaccaagccagaaaaat
ttgacagaactggctaagaaaattggtatcacaggaaaagagatagaagatctatgtgag
gatgagaaagttgagaaggaagtgctgaaagaattagcaactgctggtagaaaagctaag
ttggagaagtttgaaattccatccaaattaaagttgtgccctgaaccctggatgcctgac
actggactggttacagatgcatttaaactgaaacgtaaaaacattgaagaaacatttaaa
cccagtctgcaaagaatgtattcatttgcataa
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