Mercenaria mercenaria (northern quahog): 123554396
Help
Entry
123554396 CDS
T07835
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mmer04040
]
123554396
Ion channels [BR:
mmer04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
123554396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
dCache_1
VWA_3
VWA_2
Motif
Other DBs
NCBI-GeneID:
123554396
NCBI-ProteinID:
XP_045200452
LinkDB
All DBs
Position
7:36615177..36664559
Genome browser
AA seq
1174 aa
AA seq
DB search
MELIWDLNRRILPFVLMFLYIVMKTGSEKAPRPATAYHDIQMQTIFNIKGWSAELSKKLV
GFSKSVTSFTDISEDYGRYFSSKAVSGDILIQTIANDINDLLKEKLDAVLALATEAERIY
KDYQYDPDIDIHFLNSKKLYSSDKQMQQSRLMELTPDDNYNHELVNHENSTVHVPAHIND
RREYSHSHIPSSNKNSVPKFLNGAYWTQRLNDQFKANEMKDNSLRWQYFCGTDGLFRIFP
GIKWPTDQNGTDSFDCRLRPWYQLAATLPKNVLILMDSSKSMEGSGMTIARGTVKAILNT
LGDDDLVNILRFSDKVEYIDDCFIDTLMPATTQNKRHLQDAVEQNVKASNTADFKGAFDK
AYNILNTLEKQRRGRLCNTAILLITNSEPENYVSVFEYFTNSFKNITTKVFTFVVGKGVD
DSREIRRMACANEGYYSRVSALADVQDNVQNYIKVMSRQMVKDRYRNKIWTPIYLDYMSY
QDKIDLNKGLQFMISVAVPVFDKRNDTFSEGNLLGVMGTDMPIKMIKEMMPVNKLGANGY
AFMINHNGYVLMHPNYRPYRKITSTKYWYDFDGEDLVLHPDYQNVEFTEVVEPAQRFHFK
QFISTLLSEKTNFGSEEVQFIGHYENMERMFKRKYNIYSRKLQGSDFSIGIALPATSMSE
PINATPVPSKIEHSLNVPDIELAPWFYCEDLDSALTGRNRIDELKRLVSEDITKCNLQLL
GNLVHDIDIRRLWERSNMNSQGIELLFIGTSSGLSMYTSANDSVPEFVLDNADTLNALYY
RRAVEGVERVDGQSAYSFTYSIPLGEEINPESTLVTASAPIIKANTERPDEPTVYAVVGF
QMKFDTLKSLMNTATSKAPTFDGHSSACDGQSISCYLVDNHGYLIMSDGYFKSEGYFFGI
EENAVMAALVRNGIFKGYNFTDYQALCEREIQASEKEMNSGVPLLNPIKTILNGLFWLVT
EIFLCVSKFSMKSVWTSWNLVHSIQTEHELCKQILDEYDYEDLEGPAERLAYNHVLHLCS
SEKKIVEHRPCHRSFTLYKANFSRSVRGSVKGCKRDYSGCKVTGCTGAIIECNIFYSASW
VEDTNLLMVVVSRGECGFCEDVPFHDFGHDHTEIIESDKTKCDRRKRRKHVVKKFPCSDF
KSNETLPCGTAHTKLPLSLLWLFVSFSLVRCLKF
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatttgggatttaaacagacggattttaccatttgttttaatgtttctctat
attgtaatgaaaactgggagtgaaaaagcaccaaggcctgcgacagcgtatcatgacata
cagatgcaaacgattttcaatatcaaaggctggtcggcagaactaagcaaaaagcttgta
ggcttcagtaaatctgtaacttccttcacagatatatcagaggattacggaagatatttc
tccagtaaagctgtatcaggagacatactgattcaaacaattgcaaacgacataaatgac
ttgctcaaagaaaagctcgatgcagttctggcacttgccacagaggcggagagaatctat
aaggactaccaatatgatccagacatagatatacatttccttaatagcaagaagctgtac
agctcagacaaacaaatgcaacaatcacgattgatggaacttacaccagatgacaactac
aaccacgaacttgtgaatcacgaaaacagtaccgtgcatgtacctgcacatattaacgac
aggcgtgagtattcgcacagccatattccttcgagtaacaagaacagtgttccgaaattt
ctgaacggtgcgtattggacacagagactgaacgaccagttcaaggcgaatgaaatgaag
gataattccttacgttggcaatacttttgtggaacggacggtttattcaggatttttcct
ggaataaaatggcctacagaccagaacgggacagatagtttcgattgtcggcttcgaccc
tggtaccaattagcagcaactttgccaaagaatgtgttgatcttgatggatagcagtaag
agcatggagggctcaggaatgactatagcccgtggcacagtcaaagcgatacttaataca
ctaggtgatgacgatcttgtcaacattctcaggttttcggataaagtggaatacatagat
gactgcttcatagacacattgatgcctgctacaactcagaataagcgccatctgcaagac
gctgtcgaacagaacgttaaggccagtaatacggcagattttaagggcgcttttgacaag
gcatacaacattttgaacactttggagaagcaacgcagaggaagactatgtaacacggct
atactgttgataacaaacagtgaaccagaaaattatgtgtccgtgtttgaatatttcacc
aacagtttcaagaatataacgaccaaagtgttcacgtttgtggtcggtaagggcgttgat
gacagcagagaaataaggcggatggcttgtgcaaatgaaggttactattcacgtgtatca
gctcttgccgatgtgcaagacaatgtgcagaactatattaaagtgatgagtagacaaatg
gttaaagatcgctaccgaaacaaaatatggacgcccatttaccttgactacatgtcgtac
caggacaaaatagatctaaacaagggtttgcagtttatgatatccgttgccgttcctgtg
tttgacaagagaaatgacacgttttcagaagggaatctacttggtgtaatgggaacagat
atgccaattaaaatgatcaaagaaatgatgccagtaaataagcttggtgcaaatggatac
gccttcatgataaatcacaatggttatgttttgatgcacccaaactacaggccttataga
aagattacttcgacgaaatactggtatgatttcgatggcgaggatttggtcttacatcct
gactaccagaatgtcgaatttacagaggttgtcgaaccagcgcaaagatttcactttaaa
cagtttatatcaacactactgtcagagaaaactaactttgggagcgaagaagttcagttt
attggccactacgagaacatggaacggatgttcaaaaggaaatataacatttacagtcga
aaattgcaaggttcagatttcagcattggaatagccttgcctgctaccagtatgagcgaa
ccgataaacgccacaccagtgccatcgaagatagagcattctttgaatgtaccagacatt
gaacttgctccatggttttattgtgaagatctagattcggctctgactggaagaaacaga
atagatgaattgaaaagacttgttagcgaagacataacaaaatgtaatctgcagttacta
ggaaatttagtgcacgatatagacattagacgactctgggagagaagtaatatgaacagt
caaggtattgagcttttattcatcggaaccagttccggacttagcatgtacacatcagca
aacgactccgttccggagttcgtcttagacaacgccgatacgttgaatgcactttactac
agacgagctgttgaaggcgtagaaagagttgatggtcaatctgcttacagcttcacctac
tctattcctctcggtgaagaaattaacccagagtcaactctagtgacagctagtgctcct
ataataaaggcaaatacagagaggcctgatgaacctactgtttatgccgtcgttggattt
cagatgaagtttgacacattaaaaagtttaatgaatacagcaacaagcaaggctccgacg
tttgacggacatagcagtgcttgtgatggacagtctattagttgctatctggtagataat
cacggttacttaatcatgtcagatggatacttcaaaagcgaaggatatttttttgggata
gaggagaatgctgttatggcagctctagtccgtaatggcatctttaaaggctacaacttt
acagattatcaagcactctgtgaacgtgaaatacaagcatcagaaaaagaaatgaatagt
ggcgtaccattacttaatcctataaaaaccatacttaatggtttgttttggttagtcaca
gagatatttctgtgtgtttcgaagttcagtatgaaatctgtatggacgagttggaattta
gttcattcaatccagactgaacatgaactatgtaagcaaattcttgacgaatacgattat
gaagatctcgaaggacctgcagagcgtttggcatataatcatgtgctgcatttatgctcc
tctgaaaagaagatcgtggaacaccgtccttgtcacagatcgtttacgttgtataaagcg
aacttcagtaggtctgtgcgtggctcggttaaaggttgtaaaagagattattcaggatgt
aaagtaacaggatgtaccggtgccattatagagtgcaatatattctattctgcgtcatgg
gtggaggacacaaatttactaatggttgtagtttcccgtggagagtgtggtttttgtgaa
gatgtccctttccacgattttggtcatgatcatacggaaattattgagtctgataagaca
aagtgtgacagaagaaaacgaaggaaacacgtagtcaagaagtttccgtgctccgacttt
aaaagcaatgagacacttccctgtggaacagcacataccaaattgccgttatccttacta
tggttatttgtttcattcagcttggtacgatgtttgaaattttga
DBGET
integrated database retrieval system
