Mercenaria mercenaria (northern quahog): 123554775
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Entry
123554775 CDS
T07835
Name
(RefSeq) serine-arginine protein 55-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123554775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmer03041
]
123554775
Spliceosome [BR:
mmer03041
]
Common components
Common spliceosomal components
SR proteins
123554775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Transformer
RRM_5
SET_assoc
Lig_C
Motif
Other DBs
NCBI-GeneID:
123554775
NCBI-ProteinID:
XP_045201045
LinkDB
All DBs
Position
7:20993073..21034319
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AA seq
285 aa
AA seq
DB search
MSGSKLYVGRLASDTREKDLERFFKGYGRLKDVAMKNGYGFVEFDDPRDADDAVYELNGK
ELLGERLIIEHARASRGRGGGGGYRGGGGGRYGGGGGYGGGGYGGGGGRYGGGGGGGRDR
YGGGRDNYRSGGGGAGGRYGPPQRTDYRLRVENLSSRASWQDLKDHMRTAGVEVSFADAH
KQRTGEGVVDCTTESDMLRALDKLDGMDINGKKIRLIEERRSSSSGGGGGGGGGRGRRSR
SRSRSRSDSRSRSRSSRSRSRSRSSSPPKERSRRRSGEEAAAGDD
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggtcaaagctttatgttgggagattggcaagtgacactagagaaaaagatctt
gagcgttttttcaagggttatggcagactaaaggatgttgcaatgaagaatggatacggc
tttgtggaatttgatgatcccagggatgctgatgatgctgtgtatgaattaaatgggaag
gaactactaggagaaagattgataattgaacatgcacgtgcatcccgaggacgtggaggt
ggtggtggatatagaggtggtggtggcgggcggtacgggggcggtggaggatatggaggg
ggtggatatgggggcggtggaggcagatacggaggtggtggtggtggaggaagagacaga
tatggaggtgggcgtgataactaccgcagtggaggaggtggtgctggcggaagatatggt
ccaccacaaagaacggactacagattgagagttgaaaatttgtcttcaagggctagctgg
caggatctgaaggatcatatgagaactgctggtgtagaagtttcttttgctgatgctcac
aaacaaagaacgggtgaaggtgttgttgattgcacaacagagtcagacatgcttcgtgca
cttgataagcttgatggtatggacatcaatgggaagaaaatacgactgatagaggagcga
agaagtagtagtagtggtggtggtggtggtggtggtggtggtagaggacgcagaagtcgt
tcacgaagcagatccaggtcagacagtcgtagccgatccagatccagtcgaagtaggtca
aggtcgaggtcaagttctccaccaaaggaacgttcacgtagaaggtccggtgaagaggca
gcagcaggggatgactga
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