Mercenaria mercenaria (northern quahog): 123554792
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Entry
123554792 CDS
T07835
Name
(RefSeq) transcription factor Sox-2-like isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123554792
Transcription factors [BR:
mmer03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
123554792
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
123554792
NCBI-ProteinID:
XP_045201080
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Position
7:complement(19780349..19783580)
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AA seq
340 aa
AA seq
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MSPEMSLKGQAPPQTQLPASHGHHPGMNGPSPGLNNNEEHHSEHHQSPNGQNGSQGSGGP
GAKNAAANDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPF
IDEAKRLRAIHMKVIAEHPDYKYRPRRKTKTLMKKDKYALPGMPPGTGGMGMGQVGRDAT
GMYMNGYMPNGYPMMTDPNAYQQMQHMGAAFQGGYGQYLPAQGMPVGQGTTTGSYMNGSS
SYTMSMAPYGMPPQSHIVKRESNTPQGHSSAGAPQGASGRPNGVAPGDLREMISMYLPPG
ADPNDPSAQQRLQQQMQAMGHYQVPSTESMNSNTVPLTHM
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagcccggagatgtccctgaagggacaggctccgccgcagacacagcttccagctagt
cacggacaccatccgggtatgaacggcccgtccccagggctcaataataacgaggaacac
catagcgaacatcaccagtcacctaatggacaaaatggatcgcaaggttcgggtggacca
ggggctaagaatgcggctgcaaacgacagagtaaagcgtccgatgaatgcatttatggtg
tggtcaaggggtcagagacggaaaatggcccaagaaaatccgaaaatgcacaattcagaa
attagcaagcgacttggtgcggaatggaagcttctgtcagagactgaaaaacgtcccttc
atagatgaggcaaaacgactgcgtgcaattcacatgaaggtaattgcggaacaccctgac
tacaagtaccggccgcgacgaaaaacaaaaactttaatgaagaaagacaaatacgctctc
cctggtatgcccccggggactggcggtatggggatgggacaagtgggacgtgacgcaaca
ggaatgtacatgaatggatacatgcccaatggatacccaatgatgacagacccaaatgct
taccagcaaatgcaacatatgggagccgccttccagggcggttatggacaatatttaccc
gctcagggtatgcctgtaggacaagggacaaccacgggctcgtacatgaatggtagctca
agttatacaatgtctatggcgccatacggcatgccaccccaatctcatattgtcaaacgt
gaatcgaacacaccgcaaggacactcaagtgcaggtgcaccgcagggcgcctctgggcga
ccaaacggtgtagctcctggtgacttacgtgaaatgatcagtatgtatttacccccgggt
gcagacccaaatgacccaagtgctcaacaaagattacagcaacaaatgcaggcaatggga
cattatcaagtaccgtccaccgaatccatgaactcgaacacagtaccgctaactcacatg
tga
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