Mercenaria mercenaria (northern quahog): 123554887
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Entry
123554887 CDS
T07835
Name
(RefSeq) patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mmer04990
]
123554887
Domain-containing proteins not elsewhere classified [BR:
mmer04990
]
Other domain-containing proteins
Patched domain-containing proteins
123554887
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
NPC1_MLD
ACR_tran
HSM3_C
Motif
Other DBs
NCBI-GeneID:
123554887
NCBI-ProteinID:
XP_045201235
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All DBs
Position
7:13371469..13392884
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AA seq
886 aa
AA seq
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MRLNALYELVERKIGGAFARYGRFVAGHAWKIIIVTIIVNGALGIGMIRLRSNIEAENVY
LPQGTQARHDVQRMKGLFPDLSGSNFNLLQLLEDGAWAKVIIKSKYGNILNRTVLEEIGD
MDAAIQNITAVADDGSIIRYSDICARVKNRCAVDGELFWDPEFLAAVDSNQVTYPRFTTS
ATGTTNFASDLGGTIVTDDTENYLSSAEFINLDYIIRTDGGRGGRYQTLAGKWVDEFKAY
MESVNSKNFEVAYSHFNSMDEELDKNIKGDITLFSITMTLMITYACVATTSSRITDQVGQ
RMWLGYAGVITAGLAIVSSFGLCAAVGVHFVSIVGVIPFLIMGIGIDDMFILLSGLSGAQ
NHKTVEDKMAATMRASGVGITITSLTDLIAFMAGAGSNFIAVRNFCIYTGAAVIFCYINN
ITFFAACMAINERRVQENRHYGTCRRIKTKEELTAEGKSDRYIMCCGGRPPTNRDEAESF
IDKLPRWLIPKIVLKTPFKIGIIVLFMAYLAASIYGCINLKQGLVFTQLVADDSYYYKYS
DWDERYFTRQTPVSFVITKTYKYSDPNTHALIEDLIISAQSNNYFDNTFEVNWLKTYKAT
PYYEDSSEKEFISGFLSFINDTKYAMFENDVIMDTTKSVIVTSRVYVISADMADSQAEGD
MMLKSREIANTAEIECFAFSPYFVPYEQYVAILGQTLRTVGTALAAVFVVTCLFMPHPVL
IIFVTLAVTMIMTGVFGFLIYLDVALSSITMIHLIMSIGFSIDFTAHICHGYMISDGKTR
DLRVKQAIDKTGAPIFHGAVSSILGIIVLIGAKSYIFRTFAAVMSFVLLFGIAHALLLLP
VILSWIGPGRLNASEDSEIIDDNTHTQNGTDLVKMSNGKYAVDKMA
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgaatgcattgtatgagctagtagagcgcaagatagggggcgcctttgctagg
tatgggagatttgtggccgggcatgcgtggaaaatcatcatcgtcaccatcattgtcaat
ggggcgcttggaatcgggatgataaggcttcggtctaacatagaagcagaaaatgtctat
ttacctcaagggactcaggctcggcatgacgtgcaaagaatgaaaggtttgttccccgac
cttagtggctcgaacttcaacctgctccagctgttagaagacggggcgtgggcaaaggtt
atcatcaaatccaaatatggaaatatcctcaataggacggtactggaagagataggagac
atggacgcagccatacagaacattacagctgttgctgatgatggctcaattataaggtat
tccgacatatgtgctagggttaaaaaccgatgtgctgttgatggggaactgttttgggat
cctgagtttcttgctgcagtggactcgaaccaggtgacgtaccccaggtttacaacgtcc
gcgacagggaccactaacttcgcgtccgatcttggaggaaccattgttacggatgatacg
gaaaattatctgtctagcgccgagtttatcaacctcgactatatcatacggacggacggc
ggacgaggtggaagataccagacacttgcaggaaaatgggttgacgagtttaaggcctac
atggagagcgtcaattcaaagaatttcgaggttgcctattctcactttaattccatggat
gaagaacttgacaaaaatattaaaggagacataacgctattttctataacaatgacatta
atgatcacatacgcatgcgtcgcaacaacatcatccagaataacagaccaggttgggcag
agaatgtggttgggttatgctggtgtaatcaccgctggactcgctatagtatctagtttt
ggcttgtgtgcagcggttggtgtgcattttgtcagcatcgttggtgttatcccctttttg
atcatgggtatcgggatagatgatatgtttatcttattgtctggattatcaggcgcccag
aatcacaaaacagttgaggacaaaatggcggccacaatgagagcttccggtgtaggaatc
acgattacctcccttacagatcttattgcatttatggctggcgccgggtccaattttatt
gctgttagaaacttttgcatatacactggtgctgccgttattttctgctatatcaacaac
ataactttctttgccgcatgtatggcaataaatgaaagacgggtgcaagaaaatcgtcat
tatggcacgtgcagaagaatcaaaaccaaagaagaattgactgcagagggtaaatcagac
agatacatcatgtgctgcgggggaagacctccaacaaatcgtgacgaggcggaaagcttc
attgacaagcttcctcggtggctaattccaaaaattgtgttgaagacaccgtttaagata
ggaattattgtgttgtttatggcctatcttgctgcgtcgatatacgggtgcatcaatttg
aaacagggacttgtttttacgcagttagtagcagatgattcgtattattacaagtattcc
gactgggatgagcggtacttcactcgtcaaacgccagtctcttttgtgataaccaaaact
tacaaatactcggatccgaatacgcatgcgctaattgaagatcttataatcagcgcccaa
tccaataactatttcgataacaccttcgaggttaattggttgaaaacttacaaagctacc
ccatactatgaggacagcagtgaaaaggaatttatttcaggattcttaagttttattaac
gatacaaagtacgccatgttcgaaaatgatgtcattatggacacgactaagtctgtcatt
gttacgtcacgtgtgtatgtcatttccgctgacatggcggacagtcaggcggaaggtgat
atgatgttgaaatcgcgagaaattgcgaacactgcagaaattgaatgttttgcattttct
ccatattttgtaccttacgaacagtatgtagcaattttgggacaaaccctaagaactgtc
gggacagctcttgccgctgtatttgtggtcacgtgcctatttatgccacatccggttctg
attatctttgtgactcttgctgtaacaatgattatgacgggtgtattcggattcttgatt
tatctcgacgtggctttaagttctatcacaatgattcatttgataatgagcataggtttc
tccattgactttacggctcatatatgccacggttacatgatatcagatggaaaaactcga
gatttgcgagtaaaacaagccattgacaaaacaggtgctcccattttccatggtgctgtg
tcatcaattctaggaattatagttttgataggtgcaaagtcatatatttttagaacattc
gcagctgtcatgtcgtttgttctgcttttcggtattgcgcatgcgttgttactccttccg
gtaatattatcgtggattggacctggaaggttaaacgcatcagaagacagtgagattatt
gatgataatacacatacgcagaatgggacagaccttgtgaaaatgtcaaacggtaaatac
gcagttgacaaaatggcttaa
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