Mercenaria mercenaria (northern quahog): 123554905
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Entry
123554905 CDS
T07835
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31 isoform X1
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mmer01009
]
123554905
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmer03009
]
123554905
Enzymes [BR:
mmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123554905
Protein phosphatases and associated proteins [BR:
mmer01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123554905
Ribosome biogenesis [BR:
mmer03009
]
Eukaryotic type
Pre-60S particles
Helicases
123554905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
123554905
NCBI-ProteinID:
XP_053381272
LinkDB
All DBs
Position
15:complement(54363041..54384548)
Genome browser
AA seq
719 aa
AA seq
DB search
MKMSDDIDSNISLNINISSKISSQLDSRNRIKGNRGQRIKARKSLKEFKKKHGTSYVPEH
QSAEHDNSVTQSVQGEESRKLTEYNTEQKLEKHKKSGIVISSLFSHNPDIPAVKSCHVTQ
VKEDLFSSDCFQDAPLHPYMKSNLEKLGFTKMTAVQHQTIPLLVSGRDLLVKSQTGSGKT
MAYVIPIVEKLCTLSPKLKRSDGCLAIIIVPTRELALQSYDVFVKLLKPFTWLVPGCIMG
GEKRKAEKARLRKGINILVATPGRLLDHIENTQSLLLDKIKWLVLDEADRLFDLGFEEKV
SKIVQAINKQSLERQTVLLSATLSQGVEKLAGMSLNNPQKVSITESSPDNPLSVKSSSNA
SGKHHTTVEDLSKQENKEVFALPKSLKQYFVVTPCKLRLVVLLTLILTKCKRELQKKMIV
FTSTQDGVEFLYRLVQHLSKYPSTGSDVEDSDSENRTSLDVYHLHGDMTQKDRTATFHDF
CSAKSGVMLCTDVAARGLHLPFVQWVIQYTCPAGVTEYVHRVGRTARAGTTGSTVMFLLP
SEIEFVQHLNGNNISIEELKLGMVLEDVTKLLPSLPGVEETQRQAPRTVEEAATYLQNCC
ELYVKNGNDMDSLAKRAFQSTIRAYATYPHNLKSVFQIRNLHLGHTAKTFGLREAPSHIG
HVSGLNSGSRKRKHTEQDHRSKMKMKKLDTVSEYKSPLVFTKDKKVSNRKRQKNVKKRH
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgtcagacgatattgattcaaatatcagtttgaatatcaatatatcaagcaag
atatcgtctcagctggactctagaaaccgtattaaaggaaacaggggtcaaagaattaaa
gcaagaaagtcattgaaggagttcaaaaagaagcatggaacatcttatgtaccagaacat
cagtctgcagaacatgataacagtgttacccagtcagtgcaaggtgaagaaagcaggaag
ttgacagagtataatacagaacaaaaacttgaaaaacataaaaagtcaggaattgtgatc
tcatccttgttctcccacaatccagatatcccagctgttaaaagttgccatgttacccag
gtgaaggaagatttattttcatcagactgttttcaggatgcacctttacacccatatatg
aaaagtaatctagagaaattaggttttaccaaaatgacagctgttcaacaccagacgata
ccacttcttgtcagtggccgtgatctgctggttaaatcacaaactggctcaggtaaaacc
atggcatatgtgatacctattgtagagaagttatgcacgctgtctccaaaacttaagaga
tctgatggatgcttagccattatcatagtgccaactcgagagttggctttgcaaagttat
gatgtatttgtcaagttgttaaagccattcacttggttagtgccaggatgcatcatgggt
ggggaaaaaagaaaggcagaaaaggcaaggttacggaagggtataaatatattggtggcc
actccaggtcgactcctagatcacatagaaaatacacagagtctgctactagacaagata
aaatggctagtgctggatgaggctgataggttgttcgatcttgggtttgaagaaaaagtt
tctaaaatagtacaagctataaataaacagagcttggaaagacagacggtacttctctca
gcaacattatctcaaggtgttgaaaagttggctggtatgtcattaaataatccacagaaa
gtttccatcacagaaagtagcccagataatccattgtcagttaaatcatctagcaatgct
tctggcaaacatcacacaacagtggaggacctatctaaacaagaaaacaaagaagtgttt
gcattacccaaaagtttgaaacagtattttgtagtaacaccatgtaaactacgacttgtt
gtgttgctgacactgatactcacaaaatgcaagagagaactacaaaagaagatgattgta
tttacatcaacacaggatggtgtggaatttttgtacagactggttcagcatctcagtaaa
tatcctagtactggaagtgatgtggaagattcagattcagaaaatagaaccagtctagat
gtataccatctgcatggtgacatgacacagaaggatagaacagcaacatttcatgatttc
tgcagtgccaagtctggtgtaatgctgtgtacagatgttgctgccagaggtctacatctg
ccatttgtacagtgggtgatacaatatacttgccctgctggtgtcacagagtatgttcac
agggttggtagaactgctagagctggaacaactggtagcactgtcatgtttcttttgcca
tcagaaatagagtttgtgcaacatctaaatggaaacaacattagtattgaagagttaaag
cttggtatggtactagaagatgtaacaaaattactgcccagtcttccaggtgtagaagaa
acacagagacaagctccaagaacagtagaagaggcagcaacctatctacagaactgctgt
gaattgtatgtgaagaatggaaatgatatggatagccttgcaaagagagcctttcagtca
acaatacgtgcttatgccacatacccacataacctgaagtcagtattccagatacgaaat
cttcatcttggccatactgccaagacatttggtttgagggaagcaccgtcacatattgga
catgttagtggcttgaattctggcagtagaaaacgtaaacatacagaacaggatcacaga
tcaaaaatgaagatgaaaaagctggatacagtctcagaatataaaagtcctctagttttc
accaaagataagaaagtttcaaatagaaaaagacagaaaaatgtcaagaaaaggcactga
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