Mercenaria mercenaria (northern quahog): 123555094
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Entry
123555094 CDS
T07835
Name
(RefSeq) transcription factor Sox-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123555094
Transcription factors [BR:
mmer03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
123555094
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
DUF7900
Motif
Other DBs
NCBI-GeneID:
123555094
NCBI-ProteinID:
XP_045201594
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Position
7:complement(5190948..5194718)
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AA seq
271 aa
AA seq
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MTSMDMQDDLSPGSSLSDRDSDMAKHCGDHVKRPMNAFMVWSRGQRRKMAQENPKMHNSE
ISKRLGADWKLLTEEEKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKSLMKKDKYAFPMP
LVPGFNPFNGLPPAYPAFSASQAESAMNQALLNEKMRAFQPPTSIPTSLSSHPLLSHLEN
SSKLDSSSLPMRTSLSEHMSSQMTSSLYSQYLQAQSAALGSLPAPAHTGHPGQYIVPCCP
PSYLPSSSDVHRPLAYVLVKPEDHYRHPAVL
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaatggacatgcaggatgatttatctccaggaagtagcctttcggacagagat
tcggacatggctaaacattgtggtgaccacgtcaagcgcccaatgaacgctttcatggtg
tggtcaaggggccagagacgtaagatggcgcaagaaaaccccaagatgcacaattctgaa
atcagtaaacgccttggtgctgactggaagcttttaactgaggaagaaaagcggccattt
atcgacgaggctaaacgactcagggcattgcatatgaaagagcatcccgattacaaatac
agaccacgccggaaaccaaaatcactaatgaagaaagacaaatatgcttttccaatgcct
ctggttcccggtttcaacccatttaatggactgccaccagcatacccagctttctctgcc
agccaggcggagagtgcgatgaatcaggcacttcttaatgaaaaaatgagagcatttcaa
ccaccaaccagtatcccaaccagtttatcatctcatccattactctcacatttggaaaat
agcagcaaacttgacagttctagtttaccaatgcggacatctttatcagaacatatgtcg
tcacaaatgacgtcatcgttatactcacaatatcttcaggctcaaagcgcggctttgggt
tcacttcccgcgcctgcgcatacaggacatccgggtcaatatattgtgccatgctgcccc
ccatcttatcttccttctagcagtgacgttcatcgacctctagcgtatgttctggtcaaa
ccggaagatcattaccggcatccggccgtattatag
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