Mercenaria mercenaria (northern quahog): 123555767
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Entry
123555767 CDS
T07835
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123555767
04121 Ubiquitin system [BR:
mmer04121
]
123555767
Transcription factors [BR:
mmer03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
123555767
Ubiquitin system [BR:
mmer04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
123555767
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
Motif
Other DBs
NCBI-GeneID:
123555767
NCBI-ProteinID:
XP_053382048
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All DBs
Position
16:complement(5520634..5544350)
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AA seq
359 aa
AA seq
DB search
MDCAGKLCEDWGDLGCFGHTLQLCLKPAMELTAVSKVISRCRKLVGHFKHSTTLTAEMRE
RQKAMGVPEHTLVQDVVTRWNSTYQMMTRLVEQRRVVSDILLDPKLSKKEDSVLNLKEYE
WDLIGELSDILRPLADTTEYMCTERCVSVSEIYPIVCGLVNRRLVTSNTDSNTASRVKEV
IREDLMRRYQPSSDTAAESAAALGALLDPRYKKLPFFSSQQRKITHGALESCREDLPLRL
PASDVNNCEETPAKRRKLDFLDFGSPERTSEDEVQSYLSEKMVSGTDPLLWWRDNEERFP
KIAIVAKRVLAVPATSVPSERIFSATGLLINKLRNRLSSEIVDSIFFLNKNEVNITEAD
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggattgtgctgggaaattatgtgaggactggggagatctgggatgcttcgggcataca
ttacagttgtgcttaaaaccagctatggaattaacagcagtttctaaagtgatatccagg
tgtaggaaattagtcggacatttcaagcactccacaacacttacagctgaaatgcgcgaa
cgacagaaggcaatgggagttccggagcatacgctggttcaagacgtcgtaacacggtgg
aattctacttaccagatgatgacccgtttagttgaacagcgacgagttgtgtcagacatt
ctcctagatccaaagttaagtaagaaagaggacagtgttctaaacttgaaggaatatgag
tgggatctgataggtgaacttagtgacattcttcgcccattagcggatactaccgagtac
atgtgtacggaacgctgtgtgtcagtatctgagatttatcccatagtgtgcggactggtg
aacaggcgtcttgtaacttcaaacacggacagtaacactgcgtcgagagtgaaagaggtg
atacgcgaagatttgatgcgacgttaccagccttcatcagacacggcggcagagtcagcg
gcagcactaggcgctcttctggacccacggtataagaagttgccattcttctcctcccag
caacgtaagatcacacatggtgctctcgaatcttgtcgtgaagacctgccgctcagactt
cccgccagtgacgtaaacaactgtgaggaaacaccagcaaagcgccgtaagttagacttt
ctcgatttcggttcacctgaacgtacctcagaggacgaggtacagagttacctaagtgaa
aaaatggtgtcgggcactgatcctcttctttggtggagagataatgaggagagatttccc
aaaattgcaatcgttgcaaaaagagttctcgcagttccggcaacttctgtaccttcagaa
cggatattcagcgcaacgggactactcattaataagttgagaaatagactatctagcgag
atagtggacagcatattctttttgaacaaaaatgaggtgaacattactgaagctgattaa
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