Mercenaria mercenaria (northern quahog): 123556315
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Entry
123556315 CDS
T07835
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123556315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123556315
Membrane trafficking [BR:
mmer04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
123556315
Endosome - Golgi transport
Arf GTPase associated proteins
123556315
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
123556315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
PH_11
SAM_1
SAM_2
PH_8
RA_2
RA
DUF4254
SOS1_NGEF_PH
DUF5788
Motif
Other DBs
NCBI-GeneID:
123556315
NCBI-ProteinID:
XP_053398515
LinkDB
All DBs
Position
5:4916093..5082525
Genome browser
AA seq
1862 aa
AA seq
DB search
MAEHHSLQYWLESINLPQYYLDFIQHGLITREQCASLDEQTLTNIGVTLPGHQRRILTHL
PNDDNWIENETTVPNLPPKKKSVRDSYLFQDRKPPDSLNVQTNSGNIDKTTGLDSVKVSP
RPVPRPRQKSSHLKSPATTPNEITPNEEKPKPTKRPTPAPRNLISPKTGNKQTVGSLPDK
HENSSREETSYKPQENHLDFENVSLRLTADSQIGVKVEPSSDVDRVQNLHDSVKLDGACM
EETSTDDASLSELYSFPDKKKTPEKSQSDTETADSTVTLRHGTNESDKHVKETNGLERAE
AEDLYINIDDSGESILKNLPEKDKNREIAEASCSAVLDTTERYENAEFDPVSKTYQVKSE
GVAHINSDNVTRHLISEPVSRNSPELCKSDNVEIEGDNEGIYEPIWEHEEKESVTKAAEN
HRASSLMQFSPLVTESNTCVITRPKEKPSAINTQVQNRMSTFENRDSASFDMPPPQFAPP
PLPPAVISMKDVISDFDPLTEPVAQHMPPVPPRPTNYKPPKLFKPYENVQFPMGAESSTL
PGHHSDIEPDLPVYSPASVSYQDARISSADDPFKYEDPFGQFKPDCEGFEPESFPPSSCN
TQGPIAPSGTEGDAIYEAAEDPDAFDPFGLNQKPSLTSLPRSISSGSSGSQYRLSEVPPA
PKWYQATPDTGRMYSVAGNLNDVDSSSNGSLDDLIDSGDTTEEDTSSGTMTQVEILPTTA
LSPRRKERSGYLYKQGGVKQNRGWRKRWVIFDSKTLRYYSNSRDQVSKRIVPLSCMTNVE
MDVKNNIYPDYSVIPLFHLPKKTFHDRPLSRIMLSSSEFFERKKWRNSQVFTSQVTPNNS
RQFKFKLHCTNRVFLFATDNLDDCKMWSNTLMEAIITYDKPKGGEVPGGDMANPDIDAWI
KINKNRYKFYVVLKGHKLCYYQNDDDFKMASPLHEIDMKLSSVKEVDRTKLQLNTHYSTF
LLHFESSSDASNWKMAIEEAITDALGDNSILDQVKENPDNGKCADCGATDAHWASMNLGI
VLCVRCAGIHRGFDPRLSKIRSLRMDTRVWNSSLIEMFKEIGNDNANNFWLKNMPTSCSI
SVETDSEARKQHIHHKYKDKLYCDKHPLAENKEMLNEALLQVAQTDNVLVTYQILMSGAD
ILYNLPGHPNSTAFEMAKEAHQRIQMEYLLQNGGDKTKNFMPGSEEASLVAKLRAEVQWQ
GYLQKTGSNMKVRLHGDDFLKRWCVLEHGHLSYYVSEESKVEKDRIDNESILCIQAVHND
KHAACFEISSKKNSRVYLFAAASEEERLHWIRSISRVFCPVDLMDQIKQMNFSLAGYAHI
KNGINRDWQRSWFMLENRKLIFIDKEETEREQDSLDLRKVSSITKIIQTQTACEACLESS
GPQFVLKSGEIMLYFQADLIKDTDRIFSALESSIKKGGDILEEQALTNDDVPIIISCCID
FIEQYGLRMDGLYRKADTESKIKALLLKFQEDARSVVLRIEEESVHLVCNVLKRFLRNLS
DPLLTAHLYKRWIQTAAEIDHNVKLQWYKYLLQQLPRINYLTLRTLASHLSKLSKHADEN
LMNLHNISIAFGSTLMKSDKVEDVTINASAVGSSMQLEMKVISDVVTYHEWLFDIKDDER
KSSLVEDKIREAQRKMEEINKNRTTVIQSNDMMIFVYYLDPKGNAESVRINKDTTAADIV
HTLTTKLKLTTGSWTVHEIIKNELERPLDPNVKVWPLVYEWQNWSSDYSAAATLCLKSSE
FREKLERAYDPSKPLFAEMKYCEKKRFVKMAFEFTQARLSCYKDTKNVSNPAGSWNIEDL
SIYRGCDSKKSPPTKFSFTFLSRGDKVGEKDLPCFGRAVCCTSEHDMLSWMSGLQMAQHP
RR
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaccattctctgcagtactggctggaaagtatcaatctgccccagtattat
ttagacttcatacagcatggtctaataacccgagaacaatgtgcaagccttgatgaacaa
actcttactaatattggggtaacactgccagggcatcaaagacggattcttactcattta
ccaaatgatgataattggattgaaaatgaaacaactgtgcctaatctcccaccaaagaaa
aaatctgtcagagactcgtaccttttccaggatcgaaaacctcctgacagtttaaatgtt
caaaccaattctggaaacattgacaaaaccacaggtcttgactctgtgaaagtttctcca
cgccctgttccaagacctaggcagaaatctagccacttaaaatctcctgcaacaacgcca
aacgaaattacaccaaatgaggaaaagccaaagccaactaagcgaccaactcctgctcca
cgaaatctcatttctccaaaaaccgggaacaaacaaacagtaggttctcttccagataaa
catgaaaatagttctcgtgaagagacaagttataaaccacaagaaaaccatttagatttt
gaaaatgtttctttaagactaactgctgattcacaaattggtgtcaaagttgagccatct
tcagatgtggacagagttcaaaatctgcatgattctgtaaagttagatggagcttgtatg
gaagaaacatcaactgatgatgcctcattatcagaattgtatagttttcccgataaaaag
aaaacaccagaaaaatctcaaagtgatactgagacagctgattcgactgtgacattgaga
cacggtacaaatgagagtgataaacatgtgaaggaaacaaatggtttagaaagagcagaa
gctgaagacttgtatataaatatagatgattcaggtgagagtatattaaagaatttacca
gaaaaagataagaatagagagattgctgaagctagttgtagtgctgttcttgacacaact
gaaaggtatgaaaatgctgaatttgatccagtgtccaaaacataccaagtgaagtctgaa
ggtgtggcacacataaatagtgacaatgtgactaggcatcttatatcagaaccagtatct
agaaattctcctgaattatgtaaaagtgataatgttgaaatagaaggtgataatgagggt
atatatgaaccaatttgggaacacgaagaaaaagaatctgtgactaaagctgctgaaaat
catcgtgcttccagtttaatgcagttctctcccttggttacagaaagtaatacgtgtgtg
atcaccagaccaaaagagaaaccttctgcaataaatacccaagtacagaatagaatgtca
acatttgagaatagagattcagcgtcttttgacatgccgccaccacagtttgctccccca
cctctgcctcctgcagtgatcagcatgaaagatgtaatatcagactttgatcccctcaca
gaaccagtggcacagcatatgccgcctgtgcccccaagaccaacaaactataaaccgcca
aagttattcaagccttacgaaaatgtgcaatttccaatgggtgctgaatcatctaccctt
cctggccaccatagtgacatagagccagatttgccagtgtactctccagcctctgtcagc
taccaagatgctcgtatttcaagtgctgatgaccctttcaaatatgaggatccgttcgga
cagtttaaaccagactgtgaaggttttgagcccgaatcctttccaccttcttcctgtaac
acacaaggtcctatagctccttctggcactgaaggtgacgcaatttatgaagctgctgag
gacccggatgcttttgatccgtttggattaaatcagaagccaagtttgacttccttacca
aggtctatttccagtggaagcagcggaagccaatacagactgagcgaagttcctcctgca
ccaaagtggtaccaggcaactccagatactggcagaatgtactcagttgcaggaaactta
aatgatgttgactcgagcagtaatggtagtttggatgatttgattgacagtggggacact
actgaggaggacactagctctggaacaatgacacaagtagagattctcccaacaacagca
ctttcaccaagaagaaaagaaagaagtggttatttgtataaacaaggaggtgtaaaacag
aaccgaggctggagaaaacgatgggtgatatttgattcaaaaacactgagatactactcc
aattcaagggaccaagtatctaaaagaatagtaccactgtcgtgtatgaccaacgtcgaa
atggatgtcaagaataatatatatcctgactattcagtcataccactattccacctaccc
aagaagacatttcatgacagaccattgtcaagaattatgctatcttcctccgaatttttt
gaaagaaagaaatggagaaattcccaggtgtttacgagtcaggtgactccaaacaactcg
agacagttcaagttcaagcttcactgtaccaacagggtgttcttgtttgcaacagataat
ctagatgattgcaagatgtggtcaaacacactaatggaggctataatcacatatgataag
cctaaaggaggagaggtaccaggaggggatatggccaatccagacattgatgcatggatc
aagattaacaagaacagatacaagttttatgttgttttgaagggacataaactctgttac
taccaaaatgatgatgatttcaagatggcttctcccctacatgaaatagacatgaagttg
tcctctgtgaaggaagtggacaggacaaaactgcagctgaatacacactacagcacattt
ctgttacattttgagagctcgtcagatgcatccaactggaagatggccattgaagaagct
attacagatgctttaggggacaattctatattagaccaggtaaaggagaatccagacaat
ggaaaatgtgctgattgtggggctacagatgctcactgggcttccatgaaccttggtatt
gtgttgtgtgtgcgatgtgctgggatacatcgagggtttgatccaagactgtcaaagatt
cggtctctcaggatggacacaagggtttggaactccagtctcattgagatgttcaaagag
attggcaatgacaatgcaaataacttttggttgaagaatatgcccactagttgcagtata
agtgtggagacagatagcgaggccaggaaacagcatattcatcataaatacaaggataaa
ttatactgtgataaacaccctctcgctgagaataaagaaatgttaaatgaggctctatta
caagtggctcagacagacaatgtgttagttacctaccagatactcatgtcaggtgctgat
attttgtacaatttaccagggcatcctaactctacagcatttgagatggcaaaagaagcc
caccagaggattcagatggagtatttacttcagaatggaggagataaaacaaagaatttc
atgcctggctcagaggaagcatcactggtggccaagctaagagctgaggtacagtggcag
gggtatctacagaagactggttccaatatgaaagtccgtttacatggggatgatttcttg
aagagatggtgtgtactagagcatggtcatcttagttattatgttagtgaagagagtaaa
gtggagaaggacaggatagataacgagtctatactgtgtatacaggctgtacacaatgac
aaacatgcagcctgctttgagattagttccaagaagaacagcagggtgtatctgtttgca
gcagccagtgaggaagaacgcttacactggattcgttctatatcacgggtattttgtcct
gtggatttgatggatcagataaagcagatgaatttctcactggcagggtatgctcatata
aagaacgggatcaacagggattggcaaaggtcatggtttatgttagagaacagaaagtta
atctttatagacaaggaggagactgaacgagaacaggatagtttagatcttagaaaagtc
agcagcatcaccaaaattatacaaactcagactgcctgtgaggcatgtttggagagcagt
gggccacagtttgtactgaaatcaggggagataatgctgtatttccaagcagatcttatc
aaggatacagacaggatcttctcagctttagaatcatctataaagaaagggggtgatatt
ctagaagaacaggctttgaccaatgatgatgttccaattataatatcttgttgcatagac
tttatagaacaatatggattaagaatggatgggttatacagaaaagctgatacagaatct
aaaataaaggcattgctgcttaaatttcaggaagatgcaagatctgtagtgttacgtata
gaagaggaatcagttcatcttgtatgtaatgtattgaagagatttctaaggaatttgtct
gacccacttctcactgctcatctctataaaagatggatacagacagctgctgaaattgac
cacaatgtaaagttacaatggtacaaatatttgttacaacagttaccaagaattaactac
ctcactctaagaacactggcttcacatcttagcaaattgtcaaaacatgcagatgagaac
ctgatgaatttacacaacatatcaatagcttttggatcaaccctgatgaagtcagacaaa
gtagaagatgtaacaataaatgcgagtgctgtgggcagttccatgcagcttgagatgaag
gttatatcagatgttgtcacctatcatgaatggctgttcgatatcaaagatgatgagagg
aaatcaagtcttgttgaagataagatccgagaggcacagagaaaaatggaagaaattaac
aaaaatagaactacagtgattcagagcaatgacatgatgatatttgtttactaccttgat
cccaagggcaatgcagagtcagtcaggatcaacaaggacaccacagcagctgatattgtt
catacactgaccacaaaactaaaactgaccactggatcctggacagtacatgaaattatc
aaaaatgagctagagcggccattggatccaaatgtgaaagtatggccattggtgtatgag
tggcagaattggtccagtgattatagtgctgctgctacactctgtctgaagtccagtgag
tttagagagaagctagaacgtgcttatgaccctagtaaaccattgtttgctgagatgaaa
tattgtgaaaagaaaagatttgtaaagatggcatttgagttcacacaagctagactgtcc
tgttataaagatacaaagaatgtaagtaaccctgcaggaagttggaatatagaagatctc
agtatttacagaggatgtgattctaaaaagtctcctcccacaaagttttcatttaccttt
ctgtcaagaggagataaagttggtgagaaagatctgccgtgttttggtagagcagtgtgc
tgtacttcagaacatgacatgttatcatggatgtcaggtctacagatggcacagcaccca
aggagatga
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integrated database retrieval system
