KEGG   Mercenaria mercenaria (northern quahog): 123556335
Entry
123556335         CDS       T07835                                 
Name
(RefSeq) high mobility group protein B2-like
  KO
K10802  high mobility group protein B1
Organism
mmer  Mercenaria mercenaria (northern quahog)
Pathway
mmer03410  Base excision repair
mmer04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:mmer00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    123556335
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    123556335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmer03036]
    123556335
   03400 DNA repair and recombination proteins [BR:mmer03400]
    123556335
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mmer04147]
    123556335
Chromosome and associated proteins [BR:mmer03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    123556335
DNA repair and recombination proteins [BR:mmer03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     123556335
   MMR (mismatch excision repair)
    Other MMR factors
     123556335
Exosome [BR:mmer04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   123556335
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 HMG_box_5 Ribosomal_60s DUF3602
Other DBs
NCBI-GeneID: 123556335
NCBI-ProteinID: XP_045202895
LinkDB
Position
5:5715199..5727657
AA seq 208 aa
MPKNKGDKPKGRMSSYAYFVQCCREEHKKKHPGENVVFAEFTKKCASKWKEMTPKEKKRF
EEMAEKDKARYEKEMSTYVPPAGGPPAKGKKRAKDPNAPKRALSAFFVFCNEERPKVRAL
HPGHTVGDVAKELGKRWEAVSDRSKFEKLAAEDKKRYEAEMERYRSGGGGGGSPKKAAGR
SPQKKQKVEESEEEEDEEEEEDEDEDDE
NT seq 627 nt   +upstreamnt  +downstreamnt
atgcctaagaacaagggagataagccaaagggacgtatgtcctcctatgcatactttgta
cagtgttgtcgtgaagaacacaagaagaaacatccaggagagaatgttgtgtttgcagaa
ttcactaagaaatgtgcttcaaaatggaaggagatgacaccaaaagagaagaagcgtttt
gaggagatggcagagaaggacaaggcacgctatgaaaaggaaatgtctacttatgttcca
ccagcaggcggaccacccgctaaagggaagaagagagccaaggatcccaatgctcctaaa
agagcactgtctgctttctttgtattttgcaacgaggagagaccaaaagtgcgtgcgtta
catcctggacacacagtgggagatgtagccaaggaactgggcaagcgttgggaggctgtg
agtgacaggtccaagttcgaaaagttggctgcagaagacaagaaaagatatgaggctgag
atggagagatacaggtctggtggtggtggtggtggaagcccaaagaaagcagctggacga
tcaccacagaagaaacagaaggtagaagaaagtgaagaggaagaagatgaggaggaagag
gaagatgaggatgaagatgacgagtag

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