Mercenaria mercenaria (northern quahog): 123556452
Help
Entry
123556452 CDS
T07835
Name
(RefSeq) transcription factor SPT20 homolog
KO
K21245
transcription factor SPT20 homolog
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123556452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmer03036
]
123556452
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
123556452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
123556452
NCBI-ProteinID:
XP_053398636
LinkDB
All DBs
Position
5:complement(11430943..11508117)
Genome browser
AA seq
972 aa
AA seq
DB search
MNSFERAVDYAEYLVELSKQNPAALLSSPVSTSSKGKSIHQKLLELYIEETGKQSEEKKL
QCNTHLLKKLVRREKLNCLILNLYPGNDGYSLMLRSKTGVETETCKLPYEVTELLDYIDD
SELPPFLVDVLEKAQVNVFYNGCVIVEVRDFRRATNGTFDMQYVLLKPNTQTLLSDINNL
TNDGNVWTQEDLFMLESKLLLATEEPLCLDPSPAVVLVANRQQYDRKKLNTPLLKRYVRK
YNQGAANRKRKFAVCSAPSELKLHDFISKKKDKKTSTSVKFGKYTVDSWKQNPVALTAPE
SVDVEKFAKIIEKPEKSIIKDNSLNLVEEHVLERDGMQDKKLLAKLTIYHRPGDDAHLGE
LYLDHDYIEDKSKGATCRFLLGNKDSVKKYLDQFREIFTEEGRRAVKITTQRPGQAPIVT
CTQTTPTTIATATVNQTGTKPVSTAAQTVELSQGATMSLGSLKRSMPIQLSLSIGPTLGG
AQQPQQIQQAGNSSQAASQIQVNMQPASISQSPLATQRLQQASQSQSASQRLKQLGIHTS
IGSRNNTPTASPVTSQPPIAQLFGSPPSSAGGAQILTQQQAAGTRTPTHTPTPTPPPSIV
SPPPQTPGLGRKSSLTAESSTIHHMAQTTHQANVGSIVQGENTTPASTSISHQPQGVANI
NIANITGIPPNINIQNLTGLPGMNIANLQGLQNMQVSLSLPGGSIAVPISMINTNSAVLQ
NQQGILGVSSGGTSSSNTPSGVTTVMSVNPGQSSVVSMVTQSTAQPHSVATTSHIVTGVI
TQPSNVIPGTSMLSVPINLAGTPLVPAGLKPASQTIRSSSSIPLQLQFGQQGIQFVNLQQ
QARPQMKAGSSLQQNQTLTQVGVKPSTSIQGPLTTAILPTHGPGQHVLSQIPVGKSGGPA
GGITTTLTHQQLVQLQPQFQAQLQAFKNPSQAPQQQLQFHQILKQPAVPTQPNITFGGKP
KNKKRTTPTPPK
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgaattcttttgaaagagccgtagattatgcagagtatttggtagagttaagtaaacag
aatcctgcagcattactgagcagtcctgtcagcacatctagtaaagggaaatctattcac
cagaaattgttggagctgtatattgaggaaaccggaaagcagtctgaagaaaagaaatta
caatgtaacacacatttactgaaaaagttagtgcgtagagaaaaattgaactgcctgata
ctgaacctgtatcctggcaacgatggatactctctaatgttgaggagtaaaactggtgtg
gaaacagagacatgcaagcttccttatgaggttacagaactattagactacattgatgat
tcagagcttccacctttccttgttgatgtactggagaaggctcaggtgaatgtattttac
aatgggtgtgtgatagtggaggttcgagatttcagacgagccaccaatgggacatttgat
atgcagtatgttcttctcaaaccgaacactcagactttgttaagtgacatcaacaacttg
acaaatgatggcaatgtttggacccaggaggatctgtttatgttggaaagtaagttactc
ctggctacagaggagccgctctgtctggatccgtccccggccgtggtccttgtggctaac
aggcaacagtatgacaggaagaaactcaacactccattactgaaaaggtatgtgaggaag
tacaaccagggtgcagcaaacaggaagaggaagtttgctgtgtgtagtgcacccagtgaa
ctcaagctgcatgatttcatcagcaaaaagaaagataagaaaacctctaccagtgttaaa
tttggaaaatatactgtggacagctggaaacagaatcctgtagcactgacagctccagaa
agtgtagatgtggaaaaatttgctaaaattattgaaaaacctgagaaaagtatcatcaag
gacaattctttgaatttggtagaagagcatgtattggagagagatggtatgcaggacaaa
aaactacttgccaaactgacaatatatcaccgtcctggcgatgatgctcatctcggagaa
ctgtacctagaccatgactacatagaggacaagtctaaaggggcaacatgcagatttcta
ctgggaaacaaagattcggtgaaaaaatacttggatcagttcagagagatttttacagag
gaaggtcgcagggctgtgaagattaccacacagagacctggtcaggcccctatagtaacc
tgtacccagacaactcctacaaccattgccacagcaacagtgaaccagactggtacaaaa
cctgtatcaactgctgcacagactgtagaattatctcaaggtgccacaatgagcctgggc
agtttgaaaagatctatgccaatacagttgtcattgtctataggccctactctaggtgga
gcccagcaaccacagcagatccaacaagcaggtaattccagtcaggcagccagtcaaatt
caggtaaacatgcagccggcatccatcagccaatcaccattagcaacacagagattgcag
caagctagccaatcacagtctgcgtctcaaaggctgaaacagcttggaatacatacgagc
ataggttccagaaacaacacaccaacagctagtcctgttacatcacaacccccaatagca
cagctatttggtagcccaccatcatcagcgggtggggctcagatcttaacccagcagcaa
gcagcaggcactagaacccccacacataccccaacacccacacctccaccctcaatagta
tcaccacctccgcagactccagggctgggcaggaagtcgagcctcactgcagaatcctcc
accatacaccacatggcacaaaccacacaccaggcaaatgttggcagtattgtacaagga
gagaacacaaccccagcctctaccagcatcagtcatcaacctcaaggtgttgccaacatc
aacattgccaacattacaggtataccacctaacatcaacattcagaatctcactggactg
ccgggtatgaatattgccaatctacagggtctgcaaaacatgcaggtgtccctctcttta
cctggtggcagtatagctgttcctatcagtatgataaacactaactcagctgtgttacag
aaccagcagggaattctgggtgtttcttctggcggtacttcatcgtcgaacacacctagt
ggtgtgacaacagtaatgtcggtaaatccaggtcagtcttctgttgtttccatggtaaca
cagtctacagcacagccacattctgtggctacaacatcacatattgtcacaggtgtcata
acacagccaagtaatgtgataccaggtaccagtatgttgtcagtaccaattaacctggct
ggtacaccactggtaccagctggtctcaaacctgccagtcagacaataagaagttcctct
tcaataccactacaattacagtttggtcagcagggcatacagtttgtgaacttgcaacaa
caggcacggccacagatgaaggcaggttcaagtctacaacaaaaccagaccctaacacaa
gtgggggttaaaccttcaacttccatacagggtcctcttactacagcaatattacccact
cacggtcctgggcagcatgtgttgtcccagatccctgtgggtaagagtggtggcccagca
ggtggtattacaacaacattaacccatcagcagttggtacaactacagcctcagttccag
gcacagttacaggcattcaagaatcccagtcaggcaccccagcaacagctgcagtttcac
cagatactgaaacaaccggcagtaccaacacaaccgaacattacatttggtggcaaacct
aaaaacaagaaacgaactactcctaccccaccaaaataa
DBGET
integrated database retrieval system
