Mercenaria mercenaria (northern quahog): 123556536
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Entry
123556536 CDS
T07835
Name
(RefSeq) protocadherin alpha-11-like isoform X1
KO
K16498
protocadherin delta 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
123556536
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mmer01009
]
123556536
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mmer04515
]
123556536
Protein phosphatases and associated proteins [BR:
mmer01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123556536
Cell adhesion molecules [BR:
mmer04515
]
Cadherins
Protocadherins
123556536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
123556536
NCBI-ProteinID:
XP_045203247
LinkDB
All DBs
Position
5:complement(15595284..15627217)
Genome browser
AA seq
1178 aa
AA seq
DB search
MKNIYSSLYSSFLLWMVSMVTCQTPDTPLTQINFKITEELETGTPIGNIAAESGLGTGNG
YNFQIVKDDYSIVFLNKTTGELTTAKVIDRETICKNQKTCDIQYEVLTNKDADIFSITVT
LKIIDINDNTPTFDPSKMVLNLSESTPEDKSYPLKSAIDLDTGDNNGITSYRFSPFSTPN
ESFEILINNDNSNNLGLSLKLIKTLDREKQNKFQLLILAEDSGTPIRTGTLTVDINVIDE
NDNKPKFDNAILNITVTEDIAIGKGIVTLRAEDADFGKNGKVAYALAGQQENYILEHFAI
DEISGQLSVAQKLEYEPNNAHKTIYIVASDQGSTPQSATATVYLTIEDIGNTAPKISLIF
WATKISENVIQVSENSKKNTAIVSVNVEDTDSGENGQVSCNLYNTYFGLESVSNSRNSYK
VFVQHTLDRESIVEHNVTVWCEDGGGLKSEVAFLVKIKDENDNSPIFSTYVYQKSFEENN
TYGAEILTVSAFDKDDPEENGRISYFIHPDNTKEFEAEENTGVIRAKVKLDREASAEKIF
EVIAVDHGKPPRSSTATVRLDLIDINDMRPEFTQPELYEFRVKEGMESNTQVDQVTATDG
DQGNNGKVVYYLPDKYKTGGIYAVPFDVLENGEIKTNMELDRENKSIYNFEVGVKDFGIP
SLNNTVRVVVKVDDINDNVPEFIFPSAENNSIIAYNEVSDTAISTLNAKDKDVGINQKLV
YFILEGNNEGIFSLDPNSGKLFIVKYIHLTEDKVYPLSVSVYDKGQPQLSVKENLSVTLR
YTNVTHKASTGDGASKSYVIIVVTVVCITCLLSVTIITVICLIRRKDIHKCGKSDTLSKV
RIPTLRSTKPSAPPQQLGNDKIYPEAVQSKNKKEVSFSFEDGDSFSSSDNKVMTAKEKGP
FPSRPSPLNDMPEEMEDATNGQHSILRTQQYSQLSSQAKYLDHTDGSLKLRPNFRKPKNV
SHQREDSHSETSGETATSHDSGKGGSVEGDNHDVQLHIETLNPSAYLIRQDGRPTHGSYR
HPKPSSPVKNIPPSTLPLPYKNTDLKPKSAFNDNNFHITHPSHRNSQNRNRCPQLDSTGS
YPDSDYISLSSNHNYSQGNINPYRDSKYNYSSHNINQLQPPIQNRGYYNQGYGHYPTYRS
NSTRDDDDTTTTSGSYTINHEDLDDDIAAAQYQVSQVV
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatatatacagttcattgtattcttcttttctgctctggatggtttccatggta
acgtgccagactccagacactcctttgacacagatcaacttcaagattactgaagagctt
gaaacaggaactcccattgggaatattgccgctgaatcaggactcggaaccggaaatgga
tataacttccaaattgtcaaggacgattattctattgtatttttgaataagacaactggt
gaattaactacagctaaagtcatagacagggaaactatctgtaaaaatcagaaaacgtgt
gacattcaatatgaggttcttaccaataaagacgcagatatattttcgatcacagttact
ttgaaaataattgatataaatgataatacaccaacatttgatccgagcaaaatggtgttg
aatttatcagaatcaactccagaagataaaagttatcccctaaaatctgcgatagattta
gatacgggagacaacaatggcattacgtcttacagattttctcctttcagtacacctaat
gaaagttttgaaattctcattaataatgacaatagcaataatttaggtttgagtttaaag
ttaattaaaacactggatcgcgaaaaacaaaataagtttcagttactgatattagcggaa
gatagcggcacacctatcagaacaggtactttgacagtagatataaatgttatagatgaa
aatgataataaaccgaagtttgataatgcaatactgaatattactgtaacagaagatatt
gctattggtaaaggaatagtaacgttaagggccgaagatgccgattttggtaaaaatggt
aaagttgcatacgcacttgccgggcagcaggaaaattatattttagaacatttcgctatt
gatgagatctcgggccagctttctgtagcccagaaacttgaatacgaaccaaataatgca
cataaaacaatttacattgttgccagtgatcaaggatcaaccccacaatctgcaacagca
actgtttatttgacgatcgaagacattggaaatactgcacctaaaatcagtctgattttc
tgggcaacgaaaatttcagaaaatgttattcaagtgtcagagaattcaaaaaagaacact
gcaattgtttcggttaatgttgaagacacggactcaggagaaaatggacaagtttcatgt
aatttgtacaacacttactttggattagaaagtgtttcaaattctagaaatagctacaaa
gtatttgtgcagcatacactagatcgtgaatctatcgttgaacataatgtgactgtttgg
tgtgaagatggtggtggcttaaagtcagaagtagcgtttttagttaaaatcaaagatgaa
aatgacaattctccgatattcagtacttacgtttatcaaaagtcatttgaagaaaataat
acgtatggagccgaaatcttgactgtaagtgcttttgataaagatgaccctgaagaaaat
ggtcgcatttcttattttattcatcctgacaatacaaaagaatttgaagctgaagaaaat
actggcgttattcgtgcaaaagttaaactagatcgagaagcatctgctgagaaaattttt
gaagttatcgcagtggatcacggaaaaccaccgaggtctagcacagcaacggttaggctt
gatttgattgatatcaatgacatgagaccagaatttactcaaccagaactctatgaattc
agagtaaaagaaggaatggaatccaatacgcaagtagatcaagtcacagctactgatggt
gatcagggaaataatggaaaagttgtctattatttacctgacaaatacaaaactggtggc
atatatgcagttccctttgacgttctagaaaatggagaaatcaaaaccaatatggaactt
gatcgggaaaataaaagtatctacaattttgaagtcggagttaaagatttcggtattcct
tctctgaataacacagtaagagttgttgtcaaagtggacgacataaatgataatgttcca
gaatttattttcccatctgctgaaaataatagtataatagcttataacgaagtttcagat
acagcgatatcaacattaaatgcaaaagacaaagatgtaggaattaatcaaaaacttgtg
tatttcattttagaaggaaacaatgaaggtattttctcccttgacccaaattccgggaaa
ctattcatcgtgaaatacattcatttaactgaagacaaagtgtatcctctttcagtatct
gtttatgacaaaggccagccacagttgtcagtgaaagaaaatctttcagtaacactacgt
tataccaatgttacccacaaagcttcaactggggacggtgcaagcaaaagttacgtaatc
atagtggtaactgttgtctgcatcacgtgcttattgtctgtcacaataattacagtgatt
tgccttatccgcaggaaagacattcacaagtgtggtaaaagtgacactttatcaaaagtc
agaatcccaaccttgcgcagtacaaagccatctgccccaccacagcaacttggcaatgac
aaaatctatcctgaagcagttcaatcaaagaataagaaggaagtgagtttctcattcgaa
gatggcgacagcttctcgagcagtgacaacaaggttatgacagccaaagaaaagggacca
tttccgagtcgaccatcaccgttgaacgatatgccagaggagatggaggatgcaacaaat
ggccaacacagcattttacgtacccaacaatacagccagttatcatcacaggcaaaatac
cttgatcacacagacggctcattgaaattgcggccaaattttcgaaaaccaaagaacgtg
agtcatcagcgtgaggacagtcacagtgagacctcaggagagaccgcaacgagtcatgac
agtggcaagggaggcagcgtagagggagataatcatgatgtacagcttcatatcgagaca
ctgaacccatccgcctacctcatccgccaagatgggcgacctacacacggttcatacaga
catccaaaaccctcatcaccagtgaaaaacattccgccaagtactttaccattgccatac
aaaaacacagacttaaaacctaaatccgcatttaatgacaataatttccacataacacat
cctagtcaccggaatagtcaaaatagaaatcggtgtccacagcttgactctaccggaagt
tatccggattctgactacattagtttaagctcaaatcataattacagtcaagggaatata
aatccttatagagactcaaaatataactatagttctcataatattaatcagttacaaccg
ccgatacagaatagaggctattataatcaaggatacggacattatccgacgtatcgtagc
aatagtacgagagacgatgatgacactacaacgacatctggaagttatacgataaatcat
gaagatcttgacgatgatattgcagcagcgcaatatcaagtatcgcaagttgtgtga
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