Mercenaria mercenaria (northern quahog): 123556580
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Entry
123556580 CDS
T07835
Name
(RefSeq) sterol regulatory element-binding protein 1-like
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123556580
04131 Membrane trafficking [BR:
mmer04131
]
123556580
Transcription factors [BR:
mmer03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
123556580
Membrane trafficking [BR:
mmer04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
123556580
Autophagy
Mitophagy
Other mitophagy associated proteins
123556580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
123556580
NCBI-ProteinID:
XP_045203339
LinkDB
All DBs
Position
5:complement(20202621..20215329)
Genome browser
AA seq
1147 aa
AA seq
DB search
MADQLGWSLGADGFPDLGPDFLSPNSFDNNNIDDIDDIVKYICPDGPGAADVFDSAPETN
AADLLLQDPQLHNAGIIDIKDEPSDFELGEQLLLSHVQQQVKSDPNPFSLTSESLLNTLQ
NSNTQPALDLNPTLSSAQQLQQAALKLQAAAAQRQNQQKQIQLLQLLQQYQQQQQQQQQQ
QQQQQQQKITLTTDQLKLLLLEYQNRQNTPVVQQQQPQPQVQQQGSNGGLTVQQLQQLLQ
LQNQLKSSSSGSQLQVSGVGSPVQVSSPISIQNAPSPSSLQISSSPTYVQTPSPIQIQTN
PGPASSPVQIHTQQVAKTSTVRPIQNIVSSGSTIVTTNIPIQMVERTNEKVPINRLSQVK
SEGKPVKGEKRTSHNAIEKRYRLSINDKITELKDLVAGTEAKLNKSAILRKAIDYIRYLL
SQNERLKRENLQLKMAAKKQNLQELLLLSKDTTEDLGMMTPPGSDMSSDSDSSPGSPVYD
EMDSQSSFSTNGMADKTRFTLCVFMLGVLAFNPFGAIFEASGVPGSASYQSGFAGRQLHG
IEEVSTGSSSLWNSGLIPTLLLWLLNGVIVAVVLARLFIFGEPVTNKNSEASTAYWRHRN
QAEQDSARGDYSAAANQWRQALQTLGRPLPTSKLDLVASLIWQVFRQIFHKIYIGRWLFC
RAGGIRKRTVEPSDVKNSARDAAIAYFKLHQLHLAGLIPGSSMWGLNLGLCSVNLAEAAG
ESVSGATQAEIYISTALRVTAGKLKFMARYFLSCARYTMSHSVDQIPASVQWLCHPEGHR
FFVDQDWKLGCKSSIFTTCPSEADPLAQVTQQFREHLLDRSLYTLVTPGNRSLDGGSQAS
EIILYTQLLTEASSLGIKDGVSNLSALEVPEMDEASAWWAAVVSVAVYWLIGDDENAERS
FPMVDSFPKKLQQSDDPLPKSVLVAFRARRNFLGNSHGSNLYSVIRQCDRAGRLLRESLK
LSYTSENADITQAIQLLVCDWLLATRTEIWEKEQSSGERDNASQTELIAFQQDLTSLRKL
AQDNKSALPRVFLHEATGRMMAGANPARTQQLLDRSIIRRRISREEKELSEDSDSETPDR
EQATALLMAGRHLPESLMAGPGDRATLISEASRLYEVLGDKKSVQSCRRTLMLLEEKSHV
QSATVQC
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccaactaggttggtcgctcggagctgatggttttccagacttaggacctgat
ttcctgagcccaaattcgtttgacaacaacaatattgatgatatagatgatattgtgaag
tacatttgtccggatggaccaggggcagccgatgtgttcgacagtgctccagaaacaaat
gcagcagatctgttactgcaagacccacagctacataatgcaggaattattgacattaaa
gacgaaccttctgacttcgaactgggtgaacaactgttgttatcacatgtgcaacaacag
gtcaaatcagaccctaatccattttcactgacctcagaatctctgttgaacaccttacag
aacagcaatactcaaccagccttggatttgaacccaacattaagtagtgctcagcagttg
caacaagctgccctgaaacttcaggcagctgcagcacaaagacagaatcaacaaaagcag
atacagttgcttcagttattgcagcagtatcagcaacaacaacagcaacaacagcagcag
caacaacaacaacaacaacagaaaattaccttgacaacagatcagttaaaactgctactt
ttagagtatcagaatagacagaacactccagtggtgcagcaacaacagccacagccacag
gttcagcagcaaggcagcaatggtggacttacagtacagcagctgcaacagttgttacaa
ctgcagaatcagttgaagtctagtagtagtggaagtcagctgcaagtgtctggtgtagga
tctccagtgcaagtatccagtccgatctccatccagaatgccccatcaccatcctcatta
cagatcagttcatcaccaacatatgtccagacaccatcgccaatacagatacaaactaat
cctggtccggcctcatcacctgttcagattcatacccaacaggttgccaaaacttcaaca
gttcgacccattcagaacattgtgtctagtggcagtactattgttaccacaaatattccc
attcagatggttgaaagaaccaatgaaaaggtgcctataaatagactgagccaggtaaag
agtgagggaaagcctgtaaagggagagaagcgaacatctcataatgcaatagaaaagcgt
tacagactgagcatcaatgacaaaattacagaactgaaagatttggtggctggtacagaa
gctaagttgaacaagtcggcaatattgaggaaagcaatagactacatccgctacctgctc
agtcaaaatgagcggttgaagagagaaaatctacaattgaaaatggcagctaagaaacaa
aatttgcaagagttactgttgttatccaaggacacaacagaagaccttggtatgatgact
cctcccggttctgacatgagcagtgatagtgattcctccccgggcagtccagtctatgat
gaaatggattcacagtccagcttctccaccaatggtatggctgacaagactagattcact
ttatgtgtatttatgttgggtgttctggcatttaatccatttggtgcgatatttgaggcc
agtggtgtgccaggctcagcatcataccagtctggctttgctggcagacagctgcacgga
attgaagaagtgtcaacaggatcttcgtcattgtggaattctgggcttatccccacgttg
ttgctatggttactgaatggtgtgatagttgctgttgtgttagcaaggttgtttatcttt
ggggaaccagttaccaataaaaacagtgaagcttctacagcctattggagacacaggaac
caggcagaacaggactcggcaaggggagactattcagcagctgcaaaccagtggagacaa
gcattacagactcttggacgacctttaccaacctccaaactggacctggttgctagcttg
atatggcaggttttcagacagatatttcacaagatatacattggacgttggttgttctgt
cgtgctgggggtatcagaaaaaggaccgtagagccatctgatgtgaagaattcagctaga
gatgctgccatagcctatttcaagctacatcaacttcatttagctggtctgatacctgga
agtagcatgtggggattgaaccttggattatgttcagtcaacctagcagaggcagctggt
gagtcagtatcaggggcaacacaggcagagatctacatctcaacagctctcagggttaca
gctggaaaactcaagttcatggctagatatttcctgagctgtgcaagatacactatgtcg
cacagtgtagatcaaattccagctagcgtgcagtggctgtgccaccctgaaggacacaga
ttctttgtggaccaagattggaaacttggctgcaagagtagcattttcaccacatgccct
tcagaagctgacccattagcgcaggtgactcagcagtttagagagcacctgttggataga
tcactgtatacattggtaacccctggcaacagatcattagatggtggttcacaggcgtca
gagatcatactgtatacacagctcctcactgaggcctcctctctcgggattaaagatgga
gtttctaatctgtcagccttggaagtaccagaaatggatgaggcctctgcatggtgggca
gcagttgtatcagtggctgtgtactggttgataggtgatgatgaaaatgctgagcgtagt
tttccgatggtcgactcattcccaaagaaactacaacagtctgatgaccctctgccaaag
tcagtgttagtggcttttagagcaagaagaaatttcctaggaaacagccatggttcaaac
ttgtactctgtaatcagacagtgtgacagggctggccgtcttctcagagagagtcttaaa
ctgtcttataccagtgagaatgcagatattacacaggctatacagttgctggtttgtgat
tggttactggctacaaggacggagatctgggagaaagaacagagcagtggagagagagac
aatgcctctcagacagaactgatagcattccagcaagaccttaccagtctcagaaagttg
gcacaagataataaatctgcattacccagggtgtttttacatgaggctacaggccgcatg
atggctggagccaacccagcccgcacacaacagttgttggacagaagtattattagaaga
agaatatctcgggaagaaaaagagttgtcagaagattctgacagtgagacaccagataga
gaacaggccactgctctattgatggctggacgtcatctgccagagtccctcatggcaggt
cctggggaccgtgcaacgctcatatcagaggctagccgtctttatgaagttttgggtgat
aaaaaatctgtacagagttgtagacggactttgatgttgttagaagagaagagccatgta
caaagtgcaactgttcagtgttga
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