Mercenaria mercenaria (northern quahog): 123556775
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Entry
123556775 CDS
T07835
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like isoform X3
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123556775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmer03021
]
123556775
03036 Chromosome and associated proteins [BR:
mmer03036
]
123556775
Transcription machinery [BR:
mmer03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
123556775
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
123556775
RSF complex
123556775
WICH complex
123556775
B-WICH complex
123556775
NORC complex
123556775
BRF complex
123556775
NuRF complex (fruit fly)
123556775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Myb_DNA-binding
TPR_15
Motif
Other DBs
NCBI-GeneID:
123556775
NCBI-ProteinID:
XP_045203682
LinkDB
All DBs
Position
5:25499406..25547849
Genome browser
AA seq
1020 aa
AA seq
DB search
MSDSESDSTSDEQMEESAPGPSVLLKAPPKGKNAEGEEEEGDYDAKIESDRGNRFEYLLK
QTEIFAHFMMTGMNSSMKSPTSPLKMKKSKSKLAEKAKLVEAGDHRHRRTETEEDEELIS
QAKKSTAVVTRFEESPSYIKNGEMRDYQVRGLNWMINLYENGINGILADEMGLGKTLQTI
SLLGYMKHYRHIPGPHLVICPKSTLSNWSNEHKRWCPSLRTVCLIGTREQRAELIRDIMM
PGEWDVCITSYEMIIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSEIVREFKTANRLLLT
GTPLQNNLHELWALLNFLLPDVFNSADDFDSWFNTSEMNKELVERLHGVLRPFLLRRLKS
EVEKRLLPKKETKVFVGLSKMQREWYTKILMKDIDVVNGAGKSDKMRLLNILMQLRKCAN
HPYLFDGAEPGPPYTTDKHLVDNCGKMVILDKLLPRLQSEGSRVLIFSQMTRVLDILEDY
CFWRNYNYCRLDGQTPHSERQVSIDEYNAPDSKKFIFMLSTRAGGLGINLATADVVILYD
SDWNPQVDLQAQDRAHRIGQKKQVRVFRFITENTVEERIVEKAEMKLRLDNVVIQQGRLV
DAAATKLGKDEVLNMIRHGASHVFASKDSEITEADIDEILAKGQKKTEEIKDRMDKLGES
SLQGLSFDTTEQRGSVYKFEGEDYREKQKIGMNWIEPPKRERKANYAVDAYFREALRVNE
PKAPKAPRPPKQPNVQDFQFFPPRLFEILDKEIYFYRKSIGYRVPKNPELGHDAERIRKE
EQGKIDEAELLTEEENAEKDELLKQGFTEWNKRDFNQFIKANEKFGRDDIDKISREVEGK
SPDEVIEYSRVFWERCNELQDIEKIMAQIERGEAKIQRRISIKRALDAKMMRYKAPFHQL
RIQYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRTAIRQAPQFRFDWFIKSRTAM
EIQRRCNTLITLIERENMELEEREKAERRRKGKAGGSAQKTAKRKADTPTNSGAKAKKKK
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattctgagtcagatagcacaagtgatgagcaaatggaagaatctgctccggga
ccatcagtgttgctgaaggcaccaccaaaaggtaaaaatgcggagggcgaggaggaagaa
ggggactatgatgctaagattgaatccgacaggggaaacagatttgagtacctcttgaaa
cagacagagatttttgctcacttcatgatgactgggatgaacagcagcatgaaatcacca
acaagccccctcaaaatgaagaagtcaaagagtaaattggcagaaaaggcaaagcttgtg
gaagctggagatcaccggcataggagaacagagaccgaagaagatgaggaacttatttca
caagccaagaaatcaacggctgttgttactagatttgaggaaagtccctcatacatcaag
aatggagagatgagagactatcaggtcagaggacttaactggatgattaatctgtatgag
aatggcattaatggtatcctagctgatgaaatgggtttgggtaagacactacagacgatt
tctttacttggatatatgaagcattatcgacatatacctggccctcatctagtcatctgt
cctaaatctactctgtctaactggagcaatgaacacaagcgctggtgccctagtctacgt
acagtctgtctcataggaacacgggaacaaagggcagaacttatccgtgacatcatgatg
cctggagagtgggacgtgtgtataacatcatatgaaatgattataaaggagaaatctgtc
ttcaagaaattcaactggagatacatggtcattgatgaagctcacagaatcaaaaatgaa
aaatcaaagttgtcagagatagtgcgcgagttcaagaccgcaaacagacttctactgact
ggtacccctctacagaacaacctacatgaactgtgggcccttctcaacttcttattacca
gatgtgttcaactctgctgacgattttgattcatggttcaacacctcggagatgaacaag
gaactggtggaaagattacatggtgttttaaggccatttttactgagacggttgaaatct
gaagtggagaaaagactgttaccaaagaaggaaaccaaggtgtttgttggtctcagtaaa
atgcagagggaatggtacacaaagatattgatgaaggatatagatgtggtgaatggtgca
ggcaagtcagacaagatgagattactcaacattctcatgcagctgaggaaatgtgccaac
catccatacctgtttgatggtgcagaaccaggtcctccatacacaactgataaacatctg
gtagacaactgtggtaaaatggtgatcctggataaacttcttccaagactacagtcagaa
ggatctcgagttctgatattcagtcagatgacacgtgtattggatattctggaagattac
tgtttttggaggaactacaattactgcagacttgatggacaaactcctcactctgaaaga
caggtgtctatagatgagtacaatgcaccagacagtaagaagtttatcttcatgttgagt
acacgagcaggtggtttaggtatcaatcttgctactgctgatgttgtcatactgtacgac
tcggactggaacccacaggttgatctacaggctcaggatcgtgcacatcgtatcggacag
aagaaacaggtacgagtgttcagatttatcacagagaacacagtagaggaacgaattgtg
gagaaagcagaaatgaagttacgtcttgataatgtagttattcagcaaggtcggcttgtt
gatgcagcagcaacgaagctgggtaaagatgaagtcttgaacatgatcagacatggagca
agtcacgtgtttgcctcgaaggatagtgaaatcacagaagcagatattgatgaaatcctt
gctaagggacagaagaaaactgaagagattaaagacaggatggataagcttggagagagc
agtttacaaggcttgtcatttgatactactgaacagcggggatctgtgtacaagtttgaa
ggggaagattacagggagaaacagaagattggcatgaactggatcgaaccaccaaagcgt
gagaggaaagccaactatgctgtagatgcctattttagagaggctctcagagtaaatgaa
ccaaaagctccaaaggcacctagaccaccaaagcagcccaatgttcaagatttccagttc
tttcctccaagactgtttgaaattttagacaaagaaatctacttctacagaaagagtata
ggttatagggttcctaaaaatccagaattagggcatgatgcagaaagaattcgaaaggaa
gaacagggcaagattgatgaagcagagttgttaactgaggaggaaaatgctgaaaaggac
gagcttttaaaacaaggttttactgaatggaacaagagagatttcaatcaatttattaag
gccaatgagaaatttggaagagatgatattgataaaatatcccgtgaggtcgagggaaaa
tcaccagacgaggtgatagagtattcacgtgtgttctgggagagatgtaatgagttgcaa
gatattgaaaaaatcatggcccaaatagaacgtggagaggccaagatccagcgtcgtata
agcatcaagcgtgccctggatgccaaaatgatgcgatacaaggctccattccatcagtta
cgtatccagtatggtacaaacaagggaaagaactacacagaggaagaagataggttcctg
atctgtatgttacacaaacttggttttgacaaggagaatgtgtacgacgagctacgtaca
gcaatccgacaagcaccacagttcagatttgactggtttatcaagtctagaactgccatg
gagatacagagacgatgtaacacattgataaccctgatagagagagagaatatggagctt
gaggaaagagaaaaggctgagaggagacggaaaggcaaggctggtggaagtgcacaaaag
actgccaaacgtaaagcagacaccccaacaaatagtggagccaaggcaaagaagaaaaaa
tga
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integrated database retrieval system
