Mercenaria mercenaria (northern quahog): 123556797
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Entry
123556797 CDS
T07835
Name
(RefSeq) protein SDA1 homolog isoform X1
KO
K14856
protein SDA1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmer03009
]
123556797
Ribosome biogenesis [BR:
mmer03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
123556797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_dom
SDA1_C
PGA2
DUF5615
Motif
Other DBs
NCBI-GeneID:
123556797
NCBI-ProteinID:
XP_053399130
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All DBs
Position
5:34858333..34892181
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AA seq
711 aa
AA seq
DB search
MDVKSMFSNFQDGGDFCISASCAWIVRLLNLTAQHQAGIYSPIPWTRKSCLHCEFLQQYR
HYQSNLQIFQLKPSQYSKTLDELLIFLAQVAHCYPEEMKDFPQDVRDVLQRHSSTLDRTM
RMTLCKALILLRNKGLVPATSVLELFFEMFRCQDKLLRKTLYTYIVSDIRNVNTNHKNAK
LNTTLQNFMYTMLKDNNPVAAKMSLDVMIELYRRNIWKDAKTVNVITTACFSKVTKILVA
ALKFFLGTDEDEVKDSDSEEEEETKSAKELLTGHRVGKKTKKRQKKLDRALGNLKKNKKK
KKKAESFNFSALHLIHDPQGLSEKLFRQLEATTERFEVKLMMVDFVSRLVGIHQLFLFNF
YPYIQRFLQPHQREVTRLLLFAAQACHELVPPENIDGVVKTIANNFITDRNSGEVMAVGL
NAMREICCRCPLAMSEDLIQDLAQYKNHRDKSVMMASRSLIQLYRKINPDILHRKDKGRP
TEATKDLKVLQYAEKDTRTYLQGTEALPDKDGNDEEEEDKQEGDGWESCSDDDDDSDGEW
VDVHHSSDEEMDNSSVPESKEEQEKKAMTISTSRILTQEEFKMLQKRQAARETEGMKSGG
KNKRKREQEEEEEERGELLKLSMIENVHKKRMHDKESRLATVMAGREDRPKYTHGPQKMN
PHASTTNRDKARGKNYTMIKHKVMNRKKKRSFRDKQIALRNSLLKRQKMKK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaaatctatgttttcaaattttcaagatggcggcgacttctgcatcagcgcg
tcatgtgcttggatagtacgacttctaaatttgactgcgcaacatcaagctgggatctat
tctcctattccttggacaagaaaatcgtgtttacattgcgaatttctacagcaatacaga
cattaccagtccaacttacagatatttcaacttaagccatcacagtattcaaagacgctg
gatgaactgttaatattcttagctcaggtggcccattgctatccagaggaaatgaaagat
tttccacaggatgtgcgagatgtgttacaacgacactcttcaactctagacaggactatg
agaatgacattatgtaaagcattgatactgctgagaaataaaggtcttgttcctgcgaca
agtgttctagaacttttctttgagatgttccggtgccaggacaaactgcttcggaagacg
ctatatacatacatagtcagcgacattagaaatgtcaacacaaaccacaaaaatgctaaa
ctcaacacaactctgcagaattttatgtacaccatgctgaaggacaataatcctgtagct
gcaaaaatgtcattggatgtgatgatagagttgtatagaagaaatatttggaaagatgcc
aaaactgtgaatgtcattactacagcttgtttctccaaagttactaagattcttgtggca
gcattaaaatttttcctcggaacagatgaggatgaggtgaaggacagtgatagtgaagag
gaggaggaaacaaaatcagctaaagagctccttacaggacatagagttggtaaaaagaca
aagaaacgtcagaagaagcttgatagagcccttggaaatttaaagaaaaacaagaaaaag
aagaaaaaagctgaatcattcaatttttctgctcttcatttgatacatgatcctcaaggt
ttaagtgagaagttgttcagacagctggaagccacaactgaaagattcgaggtgaaactg
atgatggtagactttgtatctagacttgttggaatacaccagttgttcctgtttaatttc
tatccctatatacagagattcttacaaccacatcaaagagaagtaacaaggctgttgctg
tttgctgcgcaggcttgtcatgaattagttcccccagagaatatagatggagttgttaag
acaatagcaaacaattttatcacagatagaaactctggagaagttatggctgtaggttta
aatgctatgagggagatatgctgtcgctgtccactggctatgtcggaagatttgattcag
gatctagcacagtataaaaatcatagagataaatctgtaatgatggcatctagatcactt
atccagttatacagaaagatcaatccggatatactacacagaaaagacaagggaagacct
acagaagctactaaagacttgaaggtgttacagtatgctgagaaagacacaagaacgtac
ttacaaggtacagaagctttaccagataaggacggcaatgatgaggaggaggaggataaa
caagaaggtgatggatgggaatcatgtagtgatgatgatgatgacagtgatggagagtgg
gtagatgttcatcattcttctgatgaggagatggataattcatcagtaccagagagtaaa
gaagaacaagagaagaaagccatgacgatatctacgtcacgtatccttacacaggaggaa
tttaaaatgttacagaagagacaagctgccagagagacagaaggaatgaaatcaggaggg
aaaaataagagaaaaagagaacaggaggaagaggaggaagaaaggggagagttactgaag
ctgtctatgatagagaatgtacataagaaaagaatgcatgataaagagtcaaggcttgct
actgtcatggctgggagggaagatcgacctaagtatactcatggtcctcagaagatgaac
ccccatgctagcactacaaacagggataaagcacgaggcaaaaactacaccatgatcaaa
cacaaggtcatgaatagaaagaagaaaagatcatttagagataaacagatcgcattaaga
aatagcctgctcaagagacagaaaatgaagaaatga
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