KEGG   Mercenaria mercenaria (northern quahog): 123556812
Entry
123556812         CDS       T07835                                 
Name
(RefSeq) la-related protein 1B-like isoform X1
  KO
K18757  la-related protein 1
Organism
mmer  Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:mmer00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmer03019]
    123556812
Messenger RNA biogenesis [BR:mmer03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     123556812
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 123556812
NCBI-ProteinID: XP_045203740
LinkDB
Position
5:33544520..33619882
AA seq 1203 aa
MSTAMTSVSQDETEKFQSKGSDSNVSEQPPIENVWAKRTLEKQLSANSIQQKTGNEESGE
VKASQEKTEDDEFQEVRNRKDKKDERKDDKSTRKNEKKDFDKKETEKKEKKTEKEEKKEE
IVKKFDNVNYVEAPLPKTNPWGVAKSSPVVPSQSQSSEAAVPVQKVAKVAETTTSTPVET
KDTITNAVSKQTKDTAALSDENWPALCEVTEVTSPSVNNKKPQMKPEPSPAITTNNNQSN
SDSGGDDSSKENKENASSNDEGQRTPKRKGLKQKWVPMNIDHKSGRNRRSRSAGRAPRPN
SAMVDKNIDRNRPERNRDRFGSESDNWRKDMRLPSPRGHVRRGGRGGGVMRGRGRGGGRG
RGNRMDAESLTGPNMHYAAPDFSDPSLLGGPMLGGIGGAVFFNVPYLDDATVKDYVKKQI
EYYFSTENLQRDFFLRRKMQKGGWIPISLVASFHRVQALTQNVALIIKACAESENLELSE
DRTRVRGKNDPDKWPLEDAVPVNPASPGASSTLHADVPEFVPGKLHADVPEFVPGKMYTL
QPHHDNEQHDEGKTGDSLEDFYAPVLSSSAPELQGEWTEVKKRAKEKKEKKKKKENKSQT
GDEQEELDFMFDEEIEQLEGVGRRNNFTEWSDDEEDDYEIPDSEINKILIVTQTPPAMRK
HPGGDRTGDHTPRSKITAEMTKLINDGLYYYEQDLWDDSDLMVGIQSTIAGKISQQDFET
FKTVNVISKETFEQIVPQDKVENQEVPPPPPTVVTPSETVKVPSPRTTQAEDVVAKSLPT
YVPNTPGRRDHGPRTPRQRNDSEKVRFYPVTKDSTKPPDPQTPRKRKTKHSNNPPVEGHV
GWVMDYKEHRPPRSRNNSSSYSECEMASSYGSYGSYSSTPHAFPNFQHPSHELLSENGFV
WHVYHKYHAKCMKERKKVGVGLSQEMNTLFRFWSFFLRQHFNKKMYTEFKTLAVEDSTEG
HRYGVECLFRFFSYGLEKRFRQDLFKDFQEEVIRDYEFGQLYGLEKFWAFLKYSRKHVDV
DPKLKQWLSKYKRLEDFRVDSVEEDTHIVHHSSLSSTGHKVRHSSGQSSGQSKPSHSKSN
QSHARSGSQPQQASHGKNNSSQSQQGSHSKSSDNSKTSHSTAGNKSGDNKSGQSGRRRTY
SNQSHPKGASSTSHQTKGASQSENKTQEPAQSGTQSEKADKKPDGQAKKVDSSKKSSAEK
DKK
NT seq 3612 nt   +upstreamnt  +downstreamnt
atgtctacagctatgacatcggtatcacaggacgaaactgaaaagtttcagtccaaaggt
tctgattcaaatgtaagtgaacaaccaccgattgaaaatgtgtgggcaaaaagaacgctt
gagaaacaattatcggcaaattcaattcaacaaaagacaggaaatgaagaatcaggtgaa
gttaaagcatctcaagaaaagactgaagatgatgagtttcaggaagtaaggaatagaaaa
gacaaaaaagatgaacgtaaagatgacaaaagtactagaaaaaatgagaaaaaagacttt
gataagaaagagacagaaaagaaagagaagaaaactgaaaaagaagagaaaaaagaagaa
atagttaagaagtttgataatgtgaactatgttgaagcgccattgccaaagacaaaccca
tggggtgtagctaagtcttctccagttgtcccaagtcagagccagagctctgaagcagct
gtgccagtgcagaaggttgccaaggtggcagaaacaacaacaagcactccagtggagact
aaagacactatcacaaatgctgtcagcaaacaaaccaaggatactgcagcattgagtgac
gagaactggccagctctctgtgaagttacagaagtcacatctccatcagtcaacaacaaa
aaacctcaaatgaaaccagaacccagtccagcaattaccacaaacaataaccagtccaat
agtgactctgggggagatgactcctccaaagaaaataaagagaatgcctcctcaaatgat
gaaggacagagaacaccaaaaagaaaaggcttgaaacaaaaatgggttcctatgaatata
gaccacaaatctggaagaaaccgaaggagtcggagtgctggacgtgctccacgtcctaat
tctgccatggtggataaaaatattgacagaaatagaccagagagaaatagagacagattt
ggttctgaatctgataactggagaaaagatatgcgactaccgagtcccagaggtcatgtt
agacgtggaggaagaggaggtggtgtgatgaggggcagagggcgtggtgggggtcgagga
agaggcaacagaatggatgctgaaagtttaacaggtccaaacatgcactatgcagcccca
gacttcagcgatccatcgttgcttggtggtccaatgttgggaggtattggaggagcagtc
ttcttcaatgtaccctacctggatgatgccacagtcaaagattatgtgaaaaaacaaatt
gagtattacttcagcacagagaatcttcagcgagactttttccttcgacgtaagatgcaa
aaaggtggctggattccaataagtcttgtagcaagtttccacagagtacaggctcttaca
cagaatgttgctttgattattaaagcatgtgctgaaagtgagaacttggagctatcagaa
gatagaacacgggtacgagggaagaatgatccagataaatggcctttagaagatgctgta
ccagtgaatccagcatcgcctggtgcttcgtcaaccttgcatgctgatgtaccagagttt
gttccgggaaaattacatgcagatgttccagaatttgttcctggaaagatgtatacatta
caaccccatcatgataatgagcagcatgatgagggtaagactggagacagcctcgaagat
ttctatgctccggtcctctcttcaagtgcacctgaactgcagggtgagtggacagaggtt
aaaaagcgagccaaagaaaagaaagagaaaaagaagaaaaaggagaacaaaagtcagaca
ggagatgagcaggaagaactagactttatgtttgatgaggaaatagagcagctggagggt
gtaggacgtagaaataacttcactgaatggtctgacgatgaagaagacgattacgagatt
ccagacagcgagatcaacaagatattaatagtaacacagacaccgcctgcgatgcgtaaa
catcctggtggagacaggacgggagatcacacaccaagatctaaaatcaccgcggagatg
acaaagcttataaatgatggactgtattactatgagcaagatctgtgggatgatagtgat
ttgatggtgggtatccagtctaccattgcaggaaagatttcgcagcaagatttcgagaca
tttaagactgtgaatgtgatatcaaaagagacatttgagcagatagtaccgcaggacaag
gtggagaaccaggaagtgccccctcctccacctactgttgttacaccatctgaaactgtg
aaagttccaagtccgagaaccacacaagcagaagatgtggttgcaaaatcactgccaaca
tacgtacctaacactccaggtaggagggatcacggccctcgtacacctcgacagcgcaat
gactcagaaaaagtccgattttatccagtcactaaagactcaacaaaaccgcctgaccca
cagacaccaagaaagcgcaaaacaaaacacagtaacaaccctccggtagagggtcatgta
ggctgggtgatggactataaagaacatcgtcctccacgatccaggaataactcttcgtct
tacagtgaatgtgaaatggcttcaagctatggatcatatggcagttatagcagcactcca
catgcattcccgaacttccagcacccgtcacacgagcttctcagtgagaacggttttgtg
tggcatgtctatcacaaataccatgctaaatgcatgaaagaacggaaaaaggttggagtt
ggtttatctcaagagatgaacacattgttcagattttggtcattctttctgcgacagcat
tttaacaagaagatgtacactgaatttaaaacattagcagtagaagactctacagaagga
cacagatatggtgttgagtgtctatttcggttttttagctatggattagagaagagattt
cgacaagatttatttaaagatttccaggaagaagttatacgagactatgagtttggccag
ctatatggtttagagaaattctgggcatttttgaagtactccagaaagcatgttgatgtg
gatcctaaacttaaacagtggcttagtaaatacaaaaggctggaagacttccgagtagat
tctgtagaagaggatacacatatagtacaccactccagtctttcatcaactggccataaa
gtgcgtcatagctcagggcagagttctggccaatcaaaaccctcccattctaagtctaac
caatcacatgccagaagtggaagccaaccgcagcaggcctctcatggcaaaaacaattct
agccaatcacagcaaggttcacacagtaaaagttcagataactctaaaactagccattca
actgctggaaataaaagtggtgataataaatctggccaatcaggaaggaggaggacatat
tcaaaccagtcacaccctaaaggagcttcaagcacttcacaccagacaaaaggagctagc
cagtctgaaaacaagacacaagaacctgcacagagtggtacccagtcagaaaaagcagac
aaaaaacctgatggacaggcaaaaaaagttgattcttcgaaaaaaagtagtgcagagaaa
gacaaaaagtaa

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