Mercenaria mercenaria (northern quahog): 123556997
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Entry
123556997 CDS
T07835
Name
(RefSeq) transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123556997
03036 Chromosome and associated proteins [BR:
mmer03036
]
123556997
Transcription factors [BR:
mmer03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
123556997
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
123556997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
123556997
NCBI-ProteinID:
XP_053400537
LinkDB
All DBs
Position
5:complement(41245965..41310179)
Genome browser
AA seq
2378 aa
AA seq
DB search
MSSSRSSRSKKPEGSTRVKLLAKETNGTDDDTEDQIEINSGASDDEGSSASDKPKKQRES
SFNRAGFSMPDDLKKLMERVTCCSCGKQLNPMNHGAVRKHPWLKVVTCKKCYKFLRSGAF
TRDDEGIDEQCRWCGDGGRLYGCDFCHNCFCRHCIKRNMGRSEAAMMEDDDGSKWHCYIC
KPKKIRKLRDDCEKILGYIEAQDKKEKEKAERAKQREKEKLEKSREKSREKSKKEEKEKD
KDKTDEKDKDKKDEKSTPKRGFPAPKGKSQIAEELKLEKKEASPSKAMSVSQSAPDLIVV
GDGPAQSEKLHHRAVNYRPDARTGVQHVQKLSSNVTAVTVGPKNDKPVVQPFASTKGGGM
PRQSVLQKPLLMGMLTTNTGPSKGPSNIDRMLVKKKPPLNDMRALKDNIFPYNVEEVAEK
MSTMAQSLNLTLNSLKTDLAIAKLSQSNMFQARQMAAAQMKNGLDYFFNNIRELLNVQIT
AQNPDNISEDKSQGDAKPLSSSSLTSTPISKQGTLVNSMPGKLNESLIPIEIDASPVKKA
EGKTEKMETDEDVVIVTDSDTQEMKVLHVKNDKVVKEEEASGEVEKSKGKENDAVDEIVL
DEDSPSESESKKETVTASNDTDDKNKKKAVNDEENDEPKGTDDDNISKKETDESEKAKQI
ENITSADSKADNITDDAESTESTSKSKLEVSENTAAELELLKEMADELNELEEKSKDSDQ
PRRSSRTKNLEQSEAKNESDKESPVRRSSRQRQKPEDESTEKKDKRDKSSPEKGKTDSKK
ADKTQEVTEEKDEEDVSVKEDKSKKKAGGKSKISYESEDENNEEEPDKRKGNEDKGKEKN
KIAKGQLKSSDSKTLDEDSDDNTEEEVPENKNNTKSVEKSSKNLKKQAKSGDTKSNEDSD
ENTEEEVPESKSAKSNEKSSKNTKKQTKSGDKSKTIESDEETEEEIPDKKKKSGEGDSKG
SKKSNKIEEVEDNTDDMAMEDQVPTDMSDTTESSDESVQEFGKKKKKRKTVAKEESSKRR
TRQSGKKSENNTENSDSDPNFDSDLEKEIKSLSKDTRLTRKKAKESADSKKESKGKKEKS
KGMKAAKDNISDLSSTDEEGKSPKRRTRQSEKKSENTTENSDTDPDFDSDLEKESESLSK
DTRLSRSKTKESKESKKEEGKSKKEKSKEKEDKKKRKVADGEESSSYIRIKIAGKAVLED
ESDDDDDRPDDLSSDSSDDPEVSFPKLSTPKKGKGKKKHDVEEFSEDSDFITPKKKRKRG
VVRDKLLDVDISDSEGETGKKGKGKKGKRKRKKEDSDAFSEISDEEENRKKGKKRRRIKK
IASSDEEKNPEDEDGSDMEDDGTPGGFAKRKQIRKVIGSKKLTDQTKAAQKAEEERRKRI
EERQKEYNTYVEVEGGEEEEEEVPEGTEREIHTPVKKDSIAQILGSPRKVPVTTKCVLEM
DKEKKKNLIEVDRTLVRKLKPHQVEAVRFMYNCCVESIHRLKKGEGSGCILAHCMGLGKT
LSVITFVHTMLSNVKLTKMTKCLVVCPLNTCLNWVNEFEIWLDDVDFEIEVYEMSKVKQN
FERAQMLKEWHEGGAGVMILGYDMYRNLVNGSHCKNKKQKKIFYETLAQPGPDIVVCDEG
HILKNDATSLSKSMMKIETRKRIVLTGTPLQNNLGEYHCMVDFVKPALLGTRKEFNNRFC
NPIINGQCSDSTPFDVKLMKRRAHILHELLAGCVQRKDYSALTKFLPPKFEYVISVRLSK
VQMSLYEKYLEMNVGGTTGTSEIRSKGARLFTDYQALMRIWTHPWVLKLDEIRQENKRQF
DDTDDDDDSFINDSGSDEDSFVDDSTTSSSNSSDEDNGNSSDRKKKKKRKTRGDNEGSSS
DQDSKKENGDEVVKKWTSKRRGNEEGAGSSWMEDMGYSNGPKELTSEWWAEFVKEEDEFK
LELSGKMTLMFEILKMCEDIGDKVLVFSQSLLSLDIIEDFLAKVDEANNPTNEPSEADKD
KEKDKPSTSEASGSGEPVENGTEKSEEEKNKEKLKQYGKSWSKGLDYFRMDGSTNSQNRK
ASQDMFNDPENYRARLFLISTKAGSLGINLVSANRVIIFDASWNPSHDIQSIFRVYRFGQ
VKPVYVYRFLAQGTMEEKIYERQVTKQSLSQRVVDEHQIERHFTSADLQELYKFQPERLD
DPEKKSRPLPMLPKDHMLAELMTNNKEWIVTYHEHDSLLENVVEQELTEEEKKAAWEDYE
DEKKGISKAMGGFQMNPAMLATQQMNMQNLLLQGQANLGQAAVLQIVQDLKARFPNLPPE
VFQQRVQAVLRQVLTQQIMQQSDIQRRQLEQQRMNELNRLNQIKQQIQRQQAMISNQQRG
FNTGMPMLQSMLPQGLRPQTMNQLQMRPSSANFDQQKK
NT seq
7137 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctcaaggtcatcaagaagtaagaagccagaaggttcaactcgtgttaaattg
ttggccaaagagacaaatggcacggatgatgacactgaagatcaaattgaaatcaattct
ggagcatcagatgatgaaggtagttctgccagtgacaaaccaaagaagcagagagaaagt
tcattcaacagagctggcttctccatgcctgatgatcttaagaagttgatggagagagta
acgtgttgttcatgtggtaaacagctaaacccaatgaatcatggtgctgtgaggaaacat
ccatggctcaaagtagtcacatgcaagaaatgttacaagttcttaagaagtggcgcattt
actcgtgatgatgaaggtatagatgaacagtgccggtggtgtggcgacggaggacgtctg
tatggctgcgatttctgtcacaattgtttctgtagacattgtatcaagcgtaacatgggc
agatccgaggctgcaatgatggaagatgatgatggcagtaaatggcactgttatatctgt
aagccaaagaaaatcagaaagcttagggatgactgtgagaaaattcttggctatattgaa
gcccaagacaaaaaagaaaaagaaaaggcagaaagagcgaaacagagagagaaagaaaag
ctagaaaaatcgagagaaaagtctagagagaagtcgaaaaaagaggaaaaagaaaaagat
aaagataaaacagatgaaaaggataaagacaagaaagatgaaaaaagcacaccaaaacgt
ggattcccagcacctaaaggcaagtcacaaatagctgaagaattgaagttggaaaagaaa
gaagcttcacctagtaaagccatgtcagtttcacaatcagcaccagaccttatagttgtt
ggggacggtccagcacaatcagaaaaactccatcatagagctgttaactatagacctgat
gcgagaactggagtccaacatgttcaaaaactcagcagcaatgttactgcagtgacagtt
ggacctaaaaatgataagcctgtggtacagccatttgcatcaacaaaagggggtggaatg
cccaggcaatcagtactacagaagcctttgttaatgggtatgttaactacaaatacagga
ccctctaaaggcccctctaacatagacagaatgctcgtaaagaaaaagcccccattaaat
gacatgagagcactaaaagataacatctttccttataatgttgaagaggttgcagaaaaa
atgagcaccatggctcaatcattaaatctcactctgaactcgcttaaaacagacttggcc
attgcaaagttgtctcaatctaatatgtttcaagcaagacagatggcagcagcccaaatg
aagaacggattggattacttctttaataatatacgtgaactattaaatgtgcagataaca
gcacaaaatccagacaatatttcagaagacaaaagtcagggtgatgcaaaacccttatct
agttcttcgttaaccagtactccaatcagcaaacaaggaactctagtcaattccatgcca
gggaagttaaatgaatcattaattccaattgaaattgatgctagtcctgttaagaaagcg
gaagggaaaactgagaaaatggaaaccgatgaagatgttgttattgtgactgatagtgac
acacaagagatgaaagtactacatgttaaaaatgacaaagtggtgaaagaggaagaagcg
agtggtgaagtagagaaatctaaaggtaaggaaaatgatgctgtagatgagattgttctt
gatgaggatagtccatcagaaagcgaatctaaaaaagaaactgttaccgcgtcaaatgat
acagatgacaaaaataaaaagaaagctgtgaatgatgaagaaaatgatgagccaaagggt
actgatgatgataacatttctaaaaaagaaacggatgaatctgaaaaagcaaaacaaata
gaaaatataacatctgcagacagcaaggctgacaatattactgatgatgctgaatctaca
gaaagtacatcgaaaagtaagttagaggttagtgagaatacagcagcagagttggaactg
ttaaaagaaatggctgatgagttgaatgaactagaagaaaaatcgaaggattctgatcag
cctagaaggtcaagtaggactaagaaccttgaacagtctgaagctaaaaatgaatctgat
aaggaatctcctgttaggaggtctagtaggcaacgtcagaagcctgaagatgaaagcact
gagaaaaaagacaaaagagacaaaagttcacctgaaaagggaaagacagattccaagaag
gcagacaagacacaagaggttactgaagaaaaggatgaagaggatgtttctgttaaggaa
gataaaagtaaaaaaaaagcagggggaaagtcaaagatctcttatgaatcagaagatgaa
aataatgaagaagagccagataagagaaagggaaatgaagataaaggaaaggaaaagaac
aaaatagcaaaaggtcagttgaagtccagtgactctaaaactcttgatgaagattcagat
gataatactgaagaagaagtgcctgaaaataaaaacaatactaaatctgttgagaaaagt
tctaaaaatttgaaaaagcaagcaaaatctggagacactaaatctaatgaagattcagat
gaaaacactgaagaagaagtgcctgaaagtaaaagtgctaaatctaatgagaaaagttca
aaaaatacgaaaaagcaaacaaaatctggagacaaatcaaaaacaattgagtctgatgaa
gaaactgaagaagaaattccagataaaaaaaagaaatcgggggaaggagatagtaaaggt
tcaaaaaagtctaataagattgaagaggttgaagataatactgatgatatggcaatggaa
gatcaggttccaactgatatgagtgataccacagagtccagtgatgagtctgtacaggag
tttggaaagaagaaaaagaagagaaaaactgttgccaaagaagaatcttcaaaaagaagg
acaagacagagtgggaagaaatctgaaaacaacacagaaaattcagattctgatccaaac
tttgattcagatcttgagaaagagatcaaaagcctgtcaaaagatacaagactaacaaga
aaaaaggcaaaggagtctgcagacagcaaaaaggaaagtaagggtaaaaaggagaaatca
aaaggaatgaaagctgccaaagacaacatcagtgatttatctagcacggatgaggaaggc
aaatctccgaaaagacggacgagacagagcgaaaagaaatccgaaaacactacagaaaat
tcagatactgacccagactttgattcagacctagagaaagaaagtgaaagtctttctaaa
gatacaagactctcaagatcgaagaccaaggagtccaaagaaagcaaaaaggaggaaggt
aaaagcaaaaaggagaaatcaaaagaaaaagaggacaagaagaaaaggaaagttgctgat
ggtgaggaaagttccagctacattcgaattaaaattgcgggaaaagctgttcttgaagat
gaaagtgatgatgatgatgacaggcccgatgatctctctagtgattccagtgatgatcct
gaagtgtcgttcccaaaattatcaaccccaaagaagggaaagggaaagaaaaaacatgat
gtggaagagtttagtgaagattccgacttcataacccctaagaagaaaaggaagcgtggt
gttgttcgtgacaaactgttagatgttgatatctcagactctgaaggggaaacagggaag
aaaggaaaggggaaaaaagggaagaggaagagaaagaaggaagacagtgatgctttctca
gagatcagtgatgaggaggagaatagaaagaaagggaagaagagaagaaggataaagaaa
attgcatccagcgatgaagaaaaaaaccctgaagatgaggatggcagtgatatggaagat
gacgggaccccaggaggttttgctaaacgtaaacaaatcaggaaggtcataggaagcaaa
aaactcacagaccaaacaaaggctgcccagaaggcagaagaagaaagaagaaaaagaatt
gaagaaagacaaaaggagtacaacacatatgttgaggttgagggtggggaagaggaagaa
gaggaggttcctgagggtacagagagagaaatacacacacctgtcaagaaggatagtatt
gcacaaattcttgggtcgcctagaaaggttcctgtgacaaccaaatgtgtacttgaaatg
gataaagagaagaagaaaaatctcattgaagttgacaggactcttgttagaaagttgaaa
ccacatcaggttgaagctgttagatttatgtacaactgttgtgtggagagcatacataga
ctgaaaaaaggtgaagggtcaggctgtattttggctcattgtatgggacttggaaaaaca
ctgtctgtgataacgtttgtccatacaatgctgtcaaatgtaaaattaacgaagatgacc
aaatgtttggtagtatgtccactaaacacatgtctgaactgggtcaacgaatttgagata
tggcttgatgatgtcgattttgaaattgaggtgtacgagatgtcaaaagtgaaacagaac
tttgagcgagcacagatgttgaaagagtggcatgaaggtggcgcaggtgtgatgatccta
gggtacgacatgtacagaaatcttgtgaatggaagtcattgtaagaacaagaagcagaaa
aaaatcttctatgagacattggcacaaccaggtcctgacattgtggtttgtgatgaaggt
catatattaaagaatgatgctacatcattgtcaaagtccatgatgaagattgaaacaaga
aagaggattgtactcacggggacgccgctacaaaataacttaggggaatatcactgtatg
gtcgactttgtgaagccggcactattggggacgaggaaagagttcaacaacagattctgt
aaccctattattaatggacagtgtagtgactcaacaccatttgatgtaaaattaatgaaa
cgcagagcccatattctccatgaacttctagctggttgtgtccagagaaaggattattct
gcactcacaaagttcttgccaccaaagtttgaatatgtgatctcggtacgactttccaaa
gttcagatgtcgttgtatgagaaatacctggaaatgaatgtaggaggtactacgggtaca
agtgagatacggagcaagggggcacgactcttcacagattatcaagccttaatgagaatc
tggacccatccttgggtgctcaaactggatgaaatcagacaggaaaataagcgtcagttt
gatgatacagatgatgatgatgattcattcattaatgatagtgggagtgatgaagattct
tttgttgatgattcaacaacgtcatcaagtaattcatcagatgaagataatggtaatagc
agtgatagaaagaagaagaaaaaaagaaaaacaagaggagacaatgagggttcttcatca
gatcaagattcaaagaaagaaaatggtgatgaagttgtgaaaaaatggacttcaaaacgc
agaggaaatgaggagggagcaggttcatcttggatggaggatatgggttacagtaatgga
ccaaaggagttgacatctgagtggtgggcggagtttgtgaaggaggaggacgagtttaaa
ttggaacttagcgggaaaatgactctcatgtttgaaatcctaaaaatgtgtgaagatatt
ggagataaagtattggtttttagccagagtttactctcactagacataatagaggatttc
ttggcaaaggttgatgaggcaaacaatccaacaaatgaacctagtgaagctgataaagat
aaagaaaaagataaaccatcaacatctgaggcttctgggtcaggagagcccgtggaaaat
gggacagagaaatcagaagaggagaaaaataaggaaaagcttaaacagtatggtaaatcc
tggtctaaaggactggactacttcagaatggatggttctacaaactcacagaataggaaa
gcatctcaagatatgttcaatgatccagaaaattacagagcacgtttattcctaatctcg
acaaaagctggttctctgggtatcaatttggtctcggcaaatcgagtaatcatctttgat
gcttcatggaacccttcacatgatatccagtctatcttccgtgtttacagatttggtcaa
gtgaaaccagtctacgtttacaggtttttagcacagggcacaatggaagagaagatatat
gaacgacaagttaccaagcagtcgttgtcgcagagagttgttgatgagcatcagatagaa
cgtcactttacttcggcagatctccaggaactgtacaagtttcagcctgaacgacttgat
gatccggagaaaaagagtcgacctctacctatgttaccaaaggaccatatgctagcagag
ctgatgaccaacaataaagagtggatagtaacatatcacgagcatgactctctactagag
aatgttgtagaacaagaactgacagaggaggagaagaaagcagcctgggaagattacgag
gatgaaaagaaaggaattagtaaagctatgggaggattccagatgaatccagctatgtta
gccacacaacagatgaacatgcagaacctgctcctgcaaggtcaagcaaaccttggacaa
gctgctgtgctacagattgtacaggacctcaaagctaggttcccgaaccttccaccagag
gtatttcagcaacgtgtacaggccgtgctcagacaagtccttacacaacagatcatgcag
cagtctgatatacagagaagacagttagagcagcagagaatgaatgagttgaatcgtctg
aaccagatcaaacagcagatccagcgccagcaggccatgatttctaaccagcagagaggg
ttcaacacaggcatgcccatgttgcagtccatgctgccccaagggctcagaccacagacc
atgaatcagttacagatgcgacccagcagcgcgaactttgaccagcagaagaaatga
DBGET
integrated database retrieval system
