Mercenaria mercenaria (northern quahog): 123557025
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Entry
123557025 CDS
T07835
Name
(RefSeq) polyubiquitin-C isoform X1
KO
K08770
ubiquitin C
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04120
Ubiquitin mediated proteolysis
mmer04137
Mitophagy - animal
mmer04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123557025
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123557025
04137 Mitophagy - animal
123557025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmer04121
]
123557025
Ubiquitin system [BR:
mmer04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
123557025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
123557025
NCBI-ProteinID:
XP_045204137
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All DBs
Position
5:complement(42541470..42546658)
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AA seq
533 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGC
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagactctcactggaaagaccatcacccttgaggttgaaccatca
gactccattgagaatgtgaaggccaagatccaggacaaagaaggcattccaccagatcag
cagagattgatctttgctggcaaacagttggaagatggtcgtacattgtcagactacaac
atccagaaggagtccactctccatcttgttctgcgtttgagaggaggtatgcagatcttt
gtgaagaccctcactggaaagaccatcacccttgaggttgaaccatcagactccattgag
aatgtgaaagccaagatccaggacaaggaaggtattcccccagatcagcagagactgatc
tttgctggcaaacagttggaagatggccgcacattgtctgattacaacatccagaaagag
tctacactccaccttgtattacgtttgagaggaggtatgcagatctttgtaaaaacactc
actggaaagaccatcacccttgaggttgaaccatcagactccattgagaatgtgaaggcc
aagatccaggacaaggaaggcattcccccagatcagcagagattgatctttgctggcaaa
cagttggaagatggcagaacattgtctgactacaacatccaaaaggagtccacccttcat
cttgtgcttcgtctaagaggaggtatgcagatctttgtaaagaccctcactggaaagacg
atcactcttgaggttgaaccatcagactccattgagaatgtgaaggccaagatccaggac
aaggaaggcattcccccagatcagcagagattgatctttgctggcaaacagttggaagat
ggtcgtacattgtcggactacaacatccagaaggagtccactctccatcttgtgctgcgt
cttagaggaggtatgcagattttcgtaaagaccctcactggaaagaccatcacccttgag
gttgagccatcagactccattgagaatgtgaaggctaagatccaggacaaggaaggcatt
cccccagatcagcagagattgatctttgctggcaaacagttggaagatggcagaacattg
tcagactacaacatccagaaggagtccacccttcatcttgtgcttcgtctaagaggaggt
atgcagatcttcgtaaagaccctcactggaaagaccatcacccttgaggttgaaccatca
gactccattgagaatgtgaaggctaagatccaggacaaggaaggcattcccccagatcag
cagagattgatctttgctggcaaacagttggaagatggcagaacgttgtctgactacaac
atccagaaggagtccacccttcatcttgtgcttcgtctgagaggaggtatgcagatcttt
gtgaagaccctcactggaaagaccatcacccttgaggttgaaccatcagactccattgag
aatgtgaaggccaagatccaggacaaggaaggcattcccccagatcagcagagattgatc
tttgctggcaaacagttggaagatggtcgtacattgtctgactacaacatccagaaggag
tccaccctccatcttgtgctgcgtcttagaggaggttgttga
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