KEGG   Mercenaria mercenaria (northern quahog): 123557025
Entry
123557025         CDS       T07835                                 
Name
(RefSeq) polyubiquitin-C isoform X1
  KO
K08770  ubiquitin C
Organism
mmer  Mercenaria mercenaria (northern quahog)
Pathway
mmer04120  Ubiquitin mediated proteolysis
mmer04137  Mitophagy - animal
mmer04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:mmer00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    123557025
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    123557025
   04137 Mitophagy - animal
    123557025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mmer04121]
    123557025
Ubiquitin system [BR:mmer04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   123557025
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 Ubiquitin_5
Other DBs
NCBI-GeneID: 123557025
NCBI-ProteinID: XP_045204137
LinkDB
Position
5:complement(42541470..42546658)
AA seq 533 aa
MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGC
NT seq 1602 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaagactctcactggaaagaccatcacccttgaggttgaaccatca
gactccattgagaatgtgaaggccaagatccaggacaaagaaggcattccaccagatcag
cagagattgatctttgctggcaaacagttggaagatggtcgtacattgtcagactacaac
atccagaaggagtccactctccatcttgttctgcgtttgagaggaggtatgcagatcttt
gtgaagaccctcactggaaagaccatcacccttgaggttgaaccatcagactccattgag
aatgtgaaagccaagatccaggacaaggaaggtattcccccagatcagcagagactgatc
tttgctggcaaacagttggaagatggccgcacattgtctgattacaacatccagaaagag
tctacactccaccttgtattacgtttgagaggaggtatgcagatctttgtaaaaacactc
actggaaagaccatcacccttgaggttgaaccatcagactccattgagaatgtgaaggcc
aagatccaggacaaggaaggcattcccccagatcagcagagattgatctttgctggcaaa
cagttggaagatggcagaacattgtctgactacaacatccaaaaggagtccacccttcat
cttgtgcttcgtctaagaggaggtatgcagatctttgtaaagaccctcactggaaagacg
atcactcttgaggttgaaccatcagactccattgagaatgtgaaggccaagatccaggac
aaggaaggcattcccccagatcagcagagattgatctttgctggcaaacagttggaagat
ggtcgtacattgtcggactacaacatccagaaggagtccactctccatcttgtgctgcgt
cttagaggaggtatgcagattttcgtaaagaccctcactggaaagaccatcacccttgag
gttgagccatcagactccattgagaatgtgaaggctaagatccaggacaaggaaggcatt
cccccagatcagcagagattgatctttgctggcaaacagttggaagatggcagaacattg
tcagactacaacatccagaaggagtccacccttcatcttgtgcttcgtctaagaggaggt
atgcagatcttcgtaaagaccctcactggaaagaccatcacccttgaggttgaaccatca
gactccattgagaatgtgaaggctaagatccaggacaaggaaggcattcccccagatcag
cagagattgatctttgctggcaaacagttggaagatggcagaacgttgtctgactacaac
atccagaaggagtccacccttcatcttgtgcttcgtctgagaggaggtatgcagatcttt
gtgaagaccctcactggaaagaccatcacccttgaggttgaaccatcagactccattgag
aatgtgaaggccaagatccaggacaaggaaggcattcccccagatcagcagagattgatc
tttgctggcaaacagttggaagatggtcgtacattgtctgactacaacatccagaaggag
tccaccctccatcttgtgctgcgtcttagaggaggttgttga

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