Mercenaria mercenaria (northern quahog): 123557045
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Entry
123557045 CDS
T07835
Name
(RefSeq) histidine--tRNA ligase-like isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
123557045
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mmer01007
]
123557045
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmer03016
]
123557045
Enzymes [BR:
mmer01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
123557045
Amino acid related enzymes [BR:
mmer01007
]
Aminoacyl-tRNA synthetase
Class II (A)
123557045
Transfer RNA biogenesis [BR:
mmer03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
123557045
Prokaryotic type
123557045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
tRNA-synt_2b
tRNA-synt_2
Topo-V_HhH_2_2nd
WHEP-TRS
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
123557045
NCBI-ProteinID:
XP_053399331
LinkDB
All DBs
Position
5:43539363..43561514
Genome browser
AA seq
519 aa
AA seq
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MEGSNIAAERAAIFKMEGSGDIHHTICINTEKSAVRKKISEEVAKLLELKAQLGDEAPKK
FVLKCPKGTRDYNPLQMSIREGVFKTIISCFKRHGAETIDTPVFELKETLTGKYGEDSKL
IYDLKDQGGELLSLRYDLTVPFARYLAMNKITTIKRYHIAKVYRRDNPAMTKGRFREFYQ
CDFDIAGQFDAMLPDAECVKIVAEILTQLDIGEYKIRVNHRKLLDGMFAACGVPDDKFRT
ICSAVDKLDKTFWEDVRAEMVDEKGLSPESADKIGHFVKFSGGIDTLEQLMKDESLLKQK
DAVEGLQELKLLLTYCDLYKVTDKVIFDLSLARGLDYYTGVIYEACLQGFAHNPAASKDK
EEESVSVGSVAGGGRYDGLVGMFDANGKNVPCVGVSIGIERVFAIMEQRALANNTKIRTT
ETEVYVVSAQKDLVEHRLKLCQELWDADIKTEQSYKKNPKALDQFQYCETNGIPIAIIIG
QSEIENNCVTMRNIATRAERKVSRDDLVEEIRKELAASS
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtcaaatattgcagcagaaagagctgctatttttaaaatggaggggagtgga
gatattcatcataccatatgtattaatacagaaaaatcagcagtaagaaaaaagatatcg
gaggaagttgccaaattacttgaattgaaagcacagttaggagatgaggctccgaaaaag
tttgtcctcaaatgcccaaagggcactcgtgactacaatcccctgcagatgtcaatacga
gaaggtgtatttaaaaccatcataagctgcttcaaacgtcacggagctgagacaatagat
actccagtatttgaattgaaggaaacgttgactgggaagtatggagaagactcgaagcta
atttatgatctgaaagaccaagggggagaactcctgtcactaagatatgaccttactgta
ccatttgcaagatatctagccatgaacaaaattaccacaatcaaaagatatcacatagct
aaagtatacaggagagataacccagccatgactaaaggaaggttcagggagttctaccag
tgtgattttgacatcgctggacagtttgacgctatgttacctgatgcagaatgtgtaaag
attgtggcagaaattcttacacagctagatattggagaatacaaaattagggtaaaccac
agaaaattgttagatggaatgtttgcagcatgtggtgtgcccgatgacaaattcaggacc
atttgttctgcagttgataaactagataagacattctgggaggatgtccgggcggaaatg
gtagatgagaaaggcttgagtccagaatctgcagataaaataggacattttgtcaaattt
agtggtggtatagatactttagaacagctgatgaaggacgagagcttattgaaacagaaa
gatgcagtggaaggtctccaagaattgaagctactgctaacatactgtgatctatacaaa
gttacagataaggttatattcgatctgagcctggctagaggactagattactataccggt
gtcatctatgaggcatgtttacaaggttttgcccacaaccctgcagcgtccaaggacaag
gaagaggagagtgtgagcgtgggaagtgttgctggaggcgggaggtacgacggtctagtc
ggaatgtttgatgcgaatgggaagaatgtgccatgtgttggtgtcagtattggtatagaa
agggtttttgcaatcatggaacaaagagcattggcaaataacacaaagatccgtacgaca
gaaacagaagtgtacgttgtctctgcccagaaagacctggtagagcacaggctgaaactg
tgtcaggaactttgggatgctgatataaagactgaacagtcttacaagaagaaccctaag
gcgttggaccagttccagtactgcgaaactaatggtatacccatagccatcatcatagga
cagtctgagatagaaaataactgtgttacaatgaggaatatagctacaagagcagagagg
aaagtctcaagggatgacttagttgaagaaataaggaaagaactggcagcatcaagttaa
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