Mercenaria mercenaria (northern quahog): 123557193
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Entry
123557193 CDS
T07835
Name
(RefSeq) vacuolar protein-sorting-associated protein 36-like
KO
K12190
ESCRT-II complex subunit VPS36
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123557193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123557193
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmer04147
]
123557193
Membrane trafficking [BR:
mmer04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
123557193
Exosome [BR:
mmer04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123557193
Exosomal proteins of colorectal cancer cells
123557193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
YfeC-like
WHD_Rad26_CSB
PH_TFIIH
DUF5424
Motif
Other DBs
NCBI-GeneID:
123557193
NCBI-ProteinID:
XP_045204442
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All DBs
Position
5:complement(51476490..51498455)
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AA seq
382 aa
AA seq
DB search
MNRFQWGETTADLGEIHVTSQTGVALYDGEDKTNFVGGVLSLTSHRLLWRDSHAKTSALC
IPLSLVVYLEEQPSGFAKSAKIIVHLQEPVPGHPAGPISYSKHSYIRLSFRESGAPEFFR
YFNQMLQEKKWEEKVLPPSRPGAQGGRHRPGIVGIERSIQQKQKQTDSSINQSFQDLKKL
MGKAQEMVTLSKSIVSKIKDRQGEITEDETVKFKAYLLSMGIPNPVTRETHGTGDKYYHE
LARELAKVLDKPIKECGGMMTLTDVYCRVNRARGMELLSPEDLLNACEMFEYLRLPIRFR
TFDSGVKVLQSSTHSEEEVIKKTTSAVEEKGSLTAEELAQLIGLSVILSKERLLLTERVG
GVCRDDSEEGLRFYPNLFLTKT
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaacagatttcagtggggtgaaacaacagctgatcttggagaaattcatgttacaagc
cagactggggttgctttatatgatggagaagataagaccaattttgttggtggtgttttg
agtcttacaagtcataggttgctatggagagatagccatgccaagacatcggctttatgt
ataccattatcacttgttgtatatctagaggaacaaccatcaggatttgcaaagagtgca
aagattattgtacatctacaagagcctgtgccaggccatccagcgggacctatatcttac
agtaaacacagctatatcagactgtccttcagggaaagtggcgctccagagtttttcaga
tattttaaccagatgttacaagagaagaaatgggaagaaaaagtacttccgccatcaaga
cctggagctcagggaggccgtcatcgcccagggattgttggaatagaaagatctatacaa
cagaaacagaagcaaacagattcttcaatcaaccagtcatttcaagatctcaagaaactc
atggggaaggcacaagaaatggtgacactgtcaaaatctatagtgtccaagatcaaggac
aggcaaggtgaaatcacagaggacgagactgtaaagtttaaagcctatttgctgagcatg
ggtataccaaatcctgtgacaagggaaacccatggtactggggacaaatattaccatgaa
ttagctagagaacttgccaaagtgctagataaacctattaaagagtgtggtgggatgatg
acattaactgatgtatattgtagggttaacagagcaagagggatggagttgctgtcaccg
gaagatttactcaatgcttgtgagatgtttgaatatctgagattgccaattaggtttcgg
acatttgatagtggtgtgaaggtattacagtcatctacacatagtgaagaagaggttata
aagaaaacaacaagtgctgtggaagaaaaaggatctttgacggcagaggaactagcccag
cttattggtctgtctgtgatattgtctaaggaaagattactactaacagagagggtagga
ggcgtatgtagagatgattctgaagaaggacttagattttaccctaatttatttcttaca
aaaacctga
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