Mercenaria mercenaria (northern quahog): 123557278
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Entry
123557278 CDS
T07835
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like isoform X1
KO
K05041
solute carrier family 6 (neurotransmitter transporter, creatine) member 8
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mmer02000
]
123557278
Transporters [BR:
mmer02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
123557278
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
123557278
NCBI-ProteinID:
XP_045204613
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Position
5:complement(55500682..55556608)
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AA seq
643 aa
AA seq
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MDNEMKTFIPSTDVLKNEENNGIRKRETWSRKLDFLIACCGFSIGFGNVWRFPFLCYKNG
GGAFLLPYFLCCIIGGIPTFFLEVSVGQFMSEGGMNAWKICPLFQGFGMASAVIIFLSNC
YYNLLLSWAFYYLFASLTTRLPWSHCDNEWNTPECTAGYSTEKKCVLSNKLVVSNVTNLK
NITHDPMLKCNNEMMSLNVSPLPGPVADVATHIAKTNETYVSDPVTEFWERKVLDISEGV
QELGMIKWDICLCLILAWIVVYFCIWKGIRSSGKVMYVTVSSPYILMMILLIRGLTLDGA
VDGIKYYLVPDFSKLLKLQVWADAGNQVFYSYSLSVGTLTALGSYNKFDHNAYRDSFLFA
LVNSMTSFLAGFVIFSVLGFMALKQNVSIDQVAESGPGLAFIAYPEAVAQMPLAPFWSAV
FFLMLILLGLDSQFGGVEAVVTCVVDLYPNVFRKGYRREVLVAVICLISFLIGLSMVCQG
GMYVFQLFDYYCASRTVFVITFLEMIVISYVYGINRFYDNLEMMYGRRVFPAFKLFWTFL
TPIFILFLFIVGVISYSELKYDRKSVEYHYPQWAIGIGWVMALASIVWIPIVGSYRIYQA
EGTFLERIKEATKPKLRKHQLRAKEDFSKINYIGTECTLDIES
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggataatgaaatgaaaacattcatcccaagtacggatgtactcaaaaatgaggaaaac
aacgggataagaaaacgagagacatggtcaagaaagttagactttcttatagcttgttgt
ggcttctctattggattcggaaatgtttggagatttccattcctttgctataaaaatgga
ggaggtgcattcttgcttccatattttctgtgttgcataattggtggaatccctacattc
ttcctcgaggtttctgttggtcagtttatgtctgagggcggcatgaatgcttggaagatc
tgtccactgtttcaaggctttggtatggcctctgcagtgattatttttctttccaactgt
tactacaaccttctcctgtcctgggccttctactacctcttcgcttctttgacaacgcga
ttgccttggtctcactgcgacaatgaatggaacacgccagaatgcactgcgggatacagc
acagagaaaaagtgtgttctctcaaataaattggttgtctcgaatgtaacgaacctcaaa
aacattacacacgatccaatgctaaaatgcaataatgaaatgatgagtttaaatgtatca
ccactgccaggtccagtcgcagatgtggcgacccatattgcgaagacaaatgaaacctac
gtgtcggatccagttacagagttttgggaaaggaaagtcctcgacatatctgaaggtgtg
caagagcttggcatgattaaatgggacatttgcctttgtctgattctagcctggattgtt
gtgtacttttgtatctggaaaggcattaggagctccggaaaggtgatgtacgtcaccgtg
tcaagtccttacattttgatgatgattttgctgatacgaggtttaacactagatggcgct
gtggacggaattaaatactatcttgtacctgacttttctaaacttctaaaattgcaggtg
tgggctgatgccggaaaccaagttttttattcttactcactgtctgtcggaacgttgaca
gcgcttggaagttacaataagttcgatcacaatgcttacagggattccttcctgtttgct
ttggtaaacagcatgacgagttttttggcgggctttgtcatattctcggtacttggtttt
atggctctaaaacagaatgtttccatagatcaagtcgctgaatcaggtccaggactggct
tttattgcatacccagaggctgttgcccagatgcctttagcacctttttggtctgcagtt
ttctttctcatgctcattctacttgggcttgacagtcagttcggtggcgtagaagctgta
gtaacatgtgttgtcgatctgtatccaaatgtattccgtaaaggttacaggagggaagtt
ttagtcgcagtaatttgccttatttcgttcctgattggactctcgatggtctgccaggga
ggcatgtacgtatttcagttgtttgactactactgtgccagcaggactgttttcgttatc
accttcttagaaatgatcgtcatttcttacgtttatggtataaatcgtttctatgacaac
ctggaaatgatgtatgggcgccgtgtatttccagcgtttaaattgttttggacgttcctg
acaccaattttcatcttgtttctgttcatagttggtgtcatttcatactctgaactcaag
tatgaccggaagtctgtagaataccattatccccaatgggcaataggaataggctgggtt
atggcccttgcttccattgtttggatacccatagttggcagctatagaatttaccaagct
gagggaacgtttcttgagagaataaaagaggcgacaaaaccaaagctgaggaaacatcaa
cttcgcgccaaagaggacttttcaaaaataaattacataggaactgaatgcacattagac
atcgaatcatag
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