Mercenaria mercenaria (northern quahog): 123557604
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Entry
123557604 CDS
T07835
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03440
Homologous recombination
mmer03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123557604
03450 Non-homologous end-joining
123557604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmer03032
]
123557604
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123557604
DNA replication proteins [BR:
mmer03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
123557604
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
123557604
BRCA1-C complex
123557604
NHEJ (non-homologous end-joining)
MRX complex
123557604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
123557604
NCBI-ProteinID:
XP_053392250
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MLSLIVDNRLLKPKVAHEREVRGQVQLHFRDVTGKSVFVKRSLTATQKGKKVEMKTLDGV
ITRLNAAGEKQGIISKSADTDREMITSLGVSKPVLENVIFCHQEDANWPLGEGKQLKEKF
DALFASTRYVKALDSIKKTKKEQDGKLKEYKIELQYLNENKKKAHQLQCDLTEQEAKLEA
SIDSVNKVKKQLKPKEEKLNKMDKQSAEVCDIQNKIDQYGSDKKLIQKHAAELQEQIEKI
VQGPDEKLKKMLSDFEKKLTETKRKLQEFEEKQSCLSTQKEDVDEGKSAILVELGKLELE
AEHHQENVVKRDQKIKQYADEYSFEGLTGAITDEKNKLFLKRIQDKRESMMEETRLKRTE
FEEEENVLQQKIDDLRDTKTKLEQNEKNKRDMVTVNQDKIKEIKKKLSAASGGRLDQIKG
ELKRHEHDLQTQESSVNTDERKQEILKLSKEKLRMEAKINDCNSEMNRLYLQSNTRTELD
LLMKDKASKEENIRKLIDKHKVTVKHLLVNAPSKNIHGKLEDYISNQNKDVKKCSAKLNQ
ITNKMSKMETERKMSMDQLTKKKAELKGIKETVYKVCGDQNFDERLSNIQEKMGKVRDQR
GSLLGTQDFYKKYSKDLEKDDPCCPLCHRGFDTQQDVRELVLELKEKLRMVPSELKTAEE
EINKCQEKYDTLLQLKPLKENMEKLDETEIPQLKSSLKKTQEEIHKQKEDLSNIEEELKV
KE
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgttatctttgatagttgataatcgtcttcttaaacctaaagttgctcatgagagggag
gtcagaggtcaagtgcaactacacttccgtgatgtaacaggaaaatctgtttttgtaaag
cgatcattgacagctacacagaagggaaagaaagttgaaatgaaaactttagatggagtt
ataacacgactgaatgcagctggtgagaaacagggcatcatctctaaaagtgctgatact
gacagagagatgattacctcccttggagtgtcaaaacctgttctggagaatgtgatattt
tgtcatcaggaagatgccaactggccactcggtgaaggaaaacaactgaaagaaaagttt
gatgctttgtttgcttcaacaagatatgtgaaagctctagacagcataaagaaaaccaaa
aaggaacaggatggcaagttaaaggaatacaaaattgagcttcagtatttgaatgaaaat
aagaaaaaggcccatcagcttcagtgtgatttaacagagcaagaggcaaaactggaagct
tctatagattctgtgaacaaagtgaaaaagcagcttaaacctaaagaggaaaagttgaac
aaaatggataaacagtcagctgaagtctgtgacattcaaaacaaaatcgaccagtatggc
agtgataagaaactgattcagaagcatgctgcggaacttcaggaacagatagaaaaaata
gtccaagggcctgatgaaaagttgaagaagatgttgtcagactttgaaaaaaaacttacg
gagacaaagagaaaactgcaggagtttgaagagaagcagtcatgtttgagcacacaaaaa
gaggatgtagatgaagggaaatcggctatattggtagaacttggaaaactagagctagag
gcagagcaccatcaagaaaatgtagtaaagagagatcaaaagattaaacagtatgcagat
gaatatagttttgaaggtttaacaggggccataactgatgagaagaacaaactattcttg
aagagaattcaggataaacgggagtctatgatggaggagaccagactgaaaaggactgaa
tttgaagaggaggagaatgtgctacagcagaagattgatgacttgagagataccaagaca
aagctggaacagaatgagaaaaataagagggacatggtgacagtcaaccaagacaagatt
aaggagatcaagaaaaagctgagtgcagcttcaggtggcagactggatcagattaaggga
gaactgaaaagacatgagcatgaccttcagacccaggagtcctcggtcaacacagatgaa
cgtaagcaagaaatattaaaattgtcaaaggaaaagttgaggatggaggcgaaaataaat
gactgcaattcagagatgaacagactttatttacagtcaaacacccgaacagaactggac
ttgctaatgaaagataaagcttcaaaggaagagaacatcagaaaactgatagacaaacat
aaagtcacagtcaagcatcttcttgttaatgcgccaagcaaaaatatccatggtaaacta
gaagattatatcagtaaccagaataaagatgtgaagaaatgttcagctaagctgaatcag
atcacaaacaaaatgtcaaagatggaaacagagagaaaaatgagcatggaccaacttacg
aaaaaaaaggcagaactcaaaggtataaaagagacagtttataaagtgtgcggcgatcag
aacttcgatgaaaggctctcaaatatacaagaaaaaatggggaaagtcagagatcaacgt
gggtctttgctgggtactcaagatttctacaagaagtattcaaaggatttagagaaagat
gacccatgttgtccactgtgtcacagaggttttgatacacaacaggatgtccgagaactc
gtacttgagttgaaggagaagttacgtatggtaccaagcgaactgaagacagctgaagaa
gaaattaataaatgtcaggaaaagtatgatactctgttgcagctgaaacctctcaaggaa
aatatggagaaacttgatgagacagagattccccagctgaagtctagcttgaagaaaaca
caggaggaaatacataaacagaaagaagatcttagtaatatagaggaagaattgaaggtg
aaggaa
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