Mercenaria mercenaria (northern quahog): 123557694
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Entry
123557694 CDS
T07835
Name
(RefSeq) protocadherin gamma-A3-like isoform X1
KO
K16498
protocadherin delta 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
123557694
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mmer01009
]
123557694
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mmer04515
]
123557694
Protein phosphatases and associated proteins [BR:
mmer01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123557694
Cell adhesion molecules [BR:
mmer04515
]
Cadherins
Protocadherins
123557694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Orf78
Motif
Other DBs
NCBI-GeneID:
123557694
NCBI-ProteinID:
XP_053400023
LinkDB
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Position
5:77853659..77885161
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AA seq
1167 aa
AA seq
DB search
MRTEMFSFCVIISSVSYVLAQETVVTYNFLEEQGELTYVGNVARDSFLYQNYTDMFPQMK
FQILTQGNVYASMFTIDESASTLRTATKLDREDICPYSHQCTLNFNVAVYLKDLDTEVLD
LFKIIKIQVFLDDINDNAPEFPNKEITIAIPENSEVKKEYFTPGAFDLDTGANNSVQRYV
MDPANEMFGFDVLYNSDGTSDLNIVVKYPLDRESRSFYQLLIYAIDGGFPVRTGSVKINI
TITDQNDNPPIFTKKQYGITVEENTAVNSTILVVTATDADADDNGNVSYRFSSRTPSKVR
DNFDINIISGEIKVKSLLNYEDKKNWTFKVEAFDHGNPARTSTSTVVVNIKDTNDNYPQI
NINLPPGGTKMSEAADTGSFVAHVVVFDQDEGVNGEIKCKVLGNDFRLEDFKIENNYKVV
LNKPLDYEEQDSYEVNIECEDGGDPPKANETSIIVKVEDMNDNYPKFLYDVYEQTFQEEV
FQSIIVQVSATDADSGELGKVTYGLHSNTDPRFKINYKSGLITANSIFDHEVDPIITLHV
LAWDNGKPSLTSTATVVINVTDINDNAPKFPSNPVEIKFLEEQQAMQTQNLNITDPDFGQ
NGEFELTFPQNDYLSEYFEFNAVTGTIRTLKPIDREEIPYFKFIVKAVDKGTPQLSSTAD
VIIQIIDANDNIPAITYPNNGNNTKFVPVTSPIGFYIATVIASDKDDGLNAQLLYFIDEG
DVRDLFKIDVNTGIISVGREMAEKDAETYKLQLAVRDNGTQQRTSYATLHVVVQPANETN
LISVEEENKQNIMLVAIFVAITVFISIAIISSIFILRYVDKRNRARIPPKINENRFYDAP
PRVDESMSATSSVSKDSDTELLKKRAKKEVSFSIDESYSDPGNNSTLTNVTSFSTVKPSY
LSMDFKSPEDTQSTTWLCNNTMSSDMSKLDMYSEKELSSLTHSQLQNALHHIAGANSDRL
WLQPVREEESKHMMMKRADDTHSETSHETTTSDSGRGGSEEDIHSNRGHPLSDTEEGKQY
NYNYSNRHRQRSRNDKVMPRRPPPPIPTDSFPRNISFSDDSVTANTTVASYNKILPPSPV
SSSTMYKTPLKQQELFTISGNCARDTFLETQMTTPGMAYSVGDIETMSEMATTCRDDAST
TTSGSYTINPDDLCNEIDELFFKDVIV
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgaggactgaaatgttttcgttttgtgtgattatttcatctgtcagctacgtgttagct
caggagaccgttgttacatacaattttcttgaggaacaaggggagctaacttatgtcgga
aatgttgcacgagacagctttttgtaccagaattataccgatatgtttccacagatgaaa
tttcagattcttactcagggaaatgtttacgcatcaatgtttaccatcgacgaaagtgcc
agtacattacggactgcaacaaagttggatcgtgaagatatttgcccatattcacatcag
tgtacattaaactttaatgttgctgtgtatttgaaagatttggatactgaagttctcgat
ttgttcaaaatcatcaaaattcaagtctttttggatgatattaatgataatgcaccagaa
ttcccaaacaaagaaataaccatcgctattcctgaaaattcagaagttaaaaaagaatat
tttacgcctggagctttcgatcttgacactggggcaaataattctgtacagagatatgtt
atggacccggcaaatgaaatgtttggattcgatgtattatataattcagatggcacctca
gatttaaacattgttgtgaaatacccactggatagggaaagcagaagtttctatcaactt
ttgatctatgccatagatggtggctttccagtaagaacaggatcggttaagataaatata
acaataactgatcaaaatgacaacccaccaatatttacgaaaaagcaatatggcattaca
gtagaggagaacactgcagtaaattcaacaattttggttgtcacagcaactgatgccgat
gcagacgacaatggaaacgtttcctatcggttcagttcaagaacgcccagcaaagtccgt
gacaatttcgatattaacatcatttcaggggagataaaagttaagagcctattgaattat
gaggacaagaaaaactggacattcaaagtggaagctttcgaccatggtaacccagcccga
accagcacttcgaccgtagttgtaaacattaaagatacaaatgataactacccacagata
aatataaacctaccaccaggtggcactaaaatgtcagaggccgcagataccggaagtttt
gttgctcacgttgtggtgtttgaccaagatgaaggtgtgaatggggagataaagtgtaaa
gtacttggcaacgattttcgtcttgaggactttaaaatcgagaataattacaaagtagtg
ttgaataagccattagattatgaagagcaggacagttatgaagttaacattgaatgtgaa
gatggcggcgaccctccaaaagctaatgaaaccagcattatcgtgaaagttgaagacatg
aatgataattatcccaaatttttgtatgatgtctacgagcaaacattccaagaggaagtg
ttccaatctataattgttcaagtttctgcaacagatgcagatagtggtgaattagggaaa
gtcacatatggactccattccaacacagatccaaggttcaaaattaattacaaaagtggt
ttgataactgctaattcgatctttgatcatgaagttgacccaattataactttacatgtt
ttagcatgggataatggtaaaccttcattgacatctactgctactgtggttataaatgtt
actgacattaatgataatgcacccaagtttccatcaaaccctgtggagattaaatttcta
gaagaacaacaggcaatgcagacacaaaatttgaatataactgatccagattttggacaa
aatggagagtttgagttgacattcccacaaaatgattatctttctgaatattttgaattt
aatgcagtaactgggacaatcagaactttgaaaccaattgatagggaagagataccttat
ttcaaattcattgtcaaagctgttgataaaggaaccccgcagttatcgagcacagctgat
gtgataattcaaatcattgacgcaaatgataacattccagctataacttatccaaataac
ggaaacaacaccaaattcgtaccagttacatctcctattggtttctacatagcaactgtg
atagcatcagataaagatgatggacttaacgcacagttgttatacttcatcgacgaaggt
gacgttcgagatttatttaaaattgatgtgaacactggaattatttcagtcggaagagag
atggcggagaaagatgcagaaacgtacaaactacagttagctgtgcgggacaatggaaca
cagcagagaacgtcatacgcaactttgcacgttgttgttcagccagcaaacgaaacgaat
ttaatatcggttgaagaagaaaataaacagaatattatgcttgtggctatttttgtggcg
attactgtatttatatcaattgcgataatttcttctatctttatacttcgatatgttgac
aagaggaatagagcaagaattccaccgaagatcaacgaaaatcgattctacgatgctcct
ccacgagttgacgaaagtatgtctgcgacgtcgagtgtctccaaggactcggatacagaa
ctgttaaaaaaacgtgcgaaaaaagaagttagtttttcaatagatgaaagctacagcgat
cctggcaacaattctacgctgacaaatgttacgtctttctctactgtaaaaccttcatat
ctttccatggactttaaatctccagaggacacacagtcaactacctggttgtgcaataat
accatgtcttcagatatgagtaaactggacatgtacagcgagaaggagttatctagtcta
acccacagtcagctgcaaaatgccctacatcatatagcaggagctaactctgacagacta
tggttacaaccagtcagagaagaagagtcgaagcatatgatgatgaaacgagcagacgac
actcatagtgagacttcccacgagacaacgaccagcgatagtgggcgtggtgggagcgag
gaagatatacatagtaacagaggacatccccttagtgatacagaagaaggcaaacagtat
aattataactacagtaaccgtcacagacagaggtcacggaacgacaaggtgatgccaaga
cgacctccgccgccaattcctactgacagttttccaagaaacattagttttagtgacgat
agtgtaactgctaacactacagtcgccagttacaataaaattttgccacctagtcctgtg
tcgagttcgacaatgtacaaaacaccgctgaagcagcaagaactgttcacaatcagcgga
aattgtgcgagagacacatttttagaaacacagatgacaactccgggtatggcatattcg
gttggcgatattgagacaatgagtgaaatggcaacaacttgccgagatgatgcaagtacg
actacatcgggaagttacaccattaatcctgatgacttgtgcaatgaaatagacgaactg
ttcttcaaagatgtcatcgtctga
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