Mercenaria mercenaria (northern quahog): 123557695
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Entry
123557695 CDS
T07835
Name
(RefSeq) protocadherin beta-14-like
KO
K16498
protocadherin delta 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03273
Virion - Lassa virus and SFTS virus
mmer04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
123557695
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
123557695
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mmer01009
]
123557695
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mmer04515
]
123557695
Protein phosphatases and associated proteins [BR:
mmer01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123557695
Cell adhesion molecules [BR:
mmer04515
]
Cadherins
Protocadherins
123557695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Ig_CLSTN
Cadherin_2
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
123557695
NCBI-ProteinID:
XP_045205261
LinkDB
All DBs
Position
5:complement(77890185..77909614)
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AA seq
1213 aa
AA seq
DB search
MAILMIWTVSWILIGQVFTQDATVFYKIREELDVDSYIGSIGLDSNLFTNTSTDTYNDLE
YRISSEMSKGATYFKIDTNGLLFIDKIIDREKFDDCDLECFLEFNVVVYELSEPTTLIQV
QIEIEDLNDNAPEFLPIKSPVRVLESLDVGSVIVTGAAIDLDQGKDNYVKTYVLLPDTDI
FNLTVTDNMDFEIRLTKPLDREMEPFYQVVVLAKDGGDKPLTGTVTLDIEVTDDNDNAPI
FSEQLYNISVQENTAANTVILELSAVDKDENDFGKVSYKFSNRVSKKISELFQVNATSGK
ISTIGTIDFETDEEFNFQVVAYDHGINSKSSTASVIIKVIDINDNSPTINLNLPPGGDVL
SEYAEIGTFVAHVEIMDQDSGKNGKVFCNVLDNFFRLETMHIANNYKIILNKTLDHDTKA
YHNVTILCQDLGNLPRQTFSSFIIHVEDMNDNAPLFTASVYAVSVVENNNKDASIVRISA
TDKDSGLNGQIYYSLHAESQGLFVVNSFTGLITANVSLDRETHGEESIFRVFAIDKGKPA
QTSTGTVVVNILDLNDNDPIFRNDPFKMNILESQNIGSAVGNVSARDPDAGLNGTFYLKF
PEDQNVLEFFDFHESGMITTKKILDRESIAFHEFYVHAIDMGGRTSSALVIVYVTDDNDN
VPEIIYPNEYDNTISIPFSLQENSEVIQIVARDYDSDENAKLYYFIDENNASYTFNIDSQ
SGKMFLNKTLHEKDIGHTLRFNIRVKDGGNPSLESSVEFFIKIKEGPNNETLNAGMSLNL
WIVVGIVIFTAIVSVLMIIVIVKICLCNRLKATSGSTSDIIMESKEVDPRLIDSSSSAST
SSKDSNGNEKIKDDSLQIQDGYQKGYFNSLDETGYLSNSSLASVDNQLYIEQVKQFGYEL
EKKVDETNSDNSGEIGTRDSGQGGSDVDINSLTELPVLDIAGSSTDSYLPPKYTDLHSNY
TDGSVSKNNIYNDQLPPFSHQTYFDNFNSSSNNSDSSFLPQTTASFSSNPTKTAERREIS
KLRKSQKRVMFSDDLENSHSSERSSTLSNQSASDISHISDSRLKPRKFHRMLSEDITSSP
SQLNRANDWLRRSADSFSRRPNNDKIYNQLPSNQIKFGSGRDFRNRPMGSNFKTYLDKVM
EKSKSSSSSDGYLSKSSESDNVFSVDTLASESTYRDSDSITTSGTYDLINEENTLSLASP
SYSNNTYARDIEI
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttgatgatttggactgtatcgtggatcctgattggtcaagtatttacccaa
gatgcaacagtgttttacaagatcagggaagaacttgatgtagacagttacattggcagt
attggccttgacagtaaccttttcactaatacatcaactgatacatataatgatttagaa
tatagaatttcaagtgaaatgagtaagggtgcaacttattttaaaatcgacacaaatggt
cttttgtttattgacaaaataattgacagagaaaagtttgacgattgcgatttagagtgt
ttcctggagttcaatgttgttgtatatgagttgtctgaaccaaccactctcatacaagtt
caaatcgaaatcgaagatttaaatgacaatgcaccagaatttttgccaataaaaagtcca
gttcgagtgttggagtccttggatgttggatcagtaatagtaacaggagcggccattgac
ttagatcaaggaaaagataactatgttaaaacttacgttttattaccagatactgatata
tttaatctgacggtaactgacaacatggattttgaaattcgacttacaaaacctttagac
agagaaatggagccattttatcaagttgtggtcttggcaaaagatggtggagacaaacca
ctaacaggaacggttacgttagatattgaagtcactgacgataatgacaatgctccaata
ttttctgaacaactttacaatatatctgtgcaagaaaatacagcagctaacacggtgatt
cttgaattatctgcagttgacaaagatgaaaacgattttggaaaagtttcatacaaattc
agcaatcgcgtttcaaagaaaatatccgagttgtttcaagtaaatgctacaagtgggaaa
atatctaccattggaacaatagattttgaaacggacgaagagtttaatttccaagttgtg
gcatatgatcacggaattaattcaaaatcatcaacagcaagtgtcattatcaaagtaatt
gacatcaatgataattcaccgactataaacttaaatttgccaccaggtggcgatgtgtta
tctgaatacgcggaaatcggaacgtttgtggcgcatgtagaaattatggaccaagattct
ggaaagaacgggaaagtattttgcaatgtgcttgacaactttttcagacttgaaacaatg
catattgccaacaattacaaaatcattttgaataagacattagatcatgacactaaagca
tatcataacgttacgattctttgtcaggatcttggcaatttgccaagacaaactttttca
agttttatcattcatgttgaggatatgaatgacaatgccccactttttactgcatcagtc
tatgctgtatcggttgttgaaaataacaataaagatgcttcgatcgtcagaatttcggca
acggataaagacagtggattaaatggacagatttattattcgttacatgctgaatctcaa
ggactgtttgtagtgaactcttttacaggtcttattactgcaaatgtgagtcttgaccga
gaaacacatggagaagaaagtatttttcgagtttttgcaatagataaaggtaaacctgct
cagacgtcaaccggaactgtcgttgtaaacattcttgatttaaatgacaatgatccgatc
ttcagaaatgacccatttaaaatgaatattcttgaaagtcaaaacataggttcagctgtt
gggaatgtttctgcaagagatcccgatgcaggtttaaatggaacgttctatttgaaattt
ccagaagaccagaatgttcttgaattcttcgattttcatgagtctggaatgattacaaca
aaaaagatccttgatcgggaatcaatcgcttttcatgaattttatgttcatgcaattgat
atgggtggaagaacaagttccgctttggtaattgtatatgtgacagatgataatgataat
gtgccagaaattatctacccgaatgaatatgataacaccatcagcatccctttctccttg
caggaaaattctgaagttattcaaatagttgctagagattatgacagcgatgaaaatgct
aaactttattatttcattgacgagaacaatgcaagttacacttttaatatagatagtcaa
tctgggaaaatgtttctgaacaagactttgcatgaaaaggatattggacatacgttaaga
tttaatatacgtgtaaaagatggcggaaatccgtctttggagtcttcagtagaatttttt
atcaaaatcaaagagggaccaaataatgaaacattaaatgctggaatgagcttgaatttg
tggattgtagttgggattgtaatatttaccgctatcgtttctgtactaatgatcatcgtt
attgttaaaatctgcttgtgcaaccgacttaaggcaacatctggaagtacgtcagacata
atcatggaatcaaaagaagttgacccgagattgatagattcgtcatcgtctgcttcaaca
tcctctaaagattccaacggcaatgagaaaatcaaagatgacagtctacaaatccaagat
ggctaccagaagggttacttcaatagtctagatgagactggttacctttcaaactctagt
ttggcttctgttgataatcagctatatatagaacaagttaaacagtttggttatgagctt
gaaaagaaggtagatgagacaaatagtgacaattctggtgagataggaaccagggacagt
ggtcagggaggtagtgatgtcgatatcaatagtcttacagagttacctgtccttgatatc
gcagggagttccacagacagttatctgcctccaaaatacacagatcttcatagcaactac
acggatggaagtgtttctaaaaataacatttacaatgaccagttacctcctttctcacat
cagacctattttgataatttcaatagtagcagtaataattcagatagttcatttttgcca
caaactactgcaagttttagcagtaaccctacaaaaactgcagagaggagagaaatctca
aagttacgaaagagtcaaaagcgagtcatgtttagtgacgaccttgagaactcccattct
agtgaaaggtcaagtactttatccaatcagtcagcatctgatattagtcatattagtgat
tcaagactaaaaccacgtaaatttcatcgaatgttaagtgaagatatcacaagttcgcca
agtcaacttaatcgagcaaatgactggttgcgacgttctgcagatagtttttcgagacga
ccaaacaatgacaaaatatacaatcagttgcctagcaaccagattaagttcggatcggga
agggacttcagaaacagaccaatggggagcaatttcaaaacatatctcgacaaagtgatg
gaaaaatcaaaatcaagtagttcaagtgatggttacctttcaaaatcctcagaaagtgac
aatgtattttctgttgatactttagcgtctgagtcaacttacagagatagtgacagtata
acgacttcagggacatatgatttgataaatgaagaaaatactttaagtcttgccagtcct
tcatactcaaataacacctatgcaagggacattgaaatataa
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