Mercenaria mercenaria (northern quahog): 123557907
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Entry
123557907 CDS
T07835
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like isoform X3
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04080
Neuroactive ligand-receptor interaction
mmer04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
123557907
04082 Neuroactive ligand signaling
123557907
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mmer04040
]
123557907
Ion channels [BR:
mmer04040
]
Ligand-gated channels
GABA-A
123557907
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
123557907
NCBI-ProteinID:
XP_045205623
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Position
5:89900496..89988668
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AA seq
453 aa
AA seq
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MRLLLIFNFFRYTWSQFPTYAENTTDVLDKLLTGYRKEIRPGFGGPPLVVETDILIRSIG
QISESNMDYSFQCYFRQRWTDERLQFDIRNITEVTLNNLFLENIWKPNTYFLNGQKSHQH
NIPRPNLFVRIRNDGRVYLSRRLTVKAACPMKLNLYPMDRPICSLELGSYGYTTDDIVYL
WKYGNNISVEVNKDVRLAQFDLISVTSSNHSDKTVFGTFSVLKVFIYFERHIGFFVLQTY
LPCSMITCLSWVSFWINRDAAPARVLLGVTTILATAGIGMTVREGLPRVSYATALDTYLN
ACVIYEMAAMIEYAAVNYFTKVLPVDGGAESDEDEEEIAPLTTPDQSVRVYLYQDTLNGE
SVPLSNVQSMSDTLGGTTAHRKSRNRRKEQRSFRHLFLKCLTGNPKFRSKLRERGNAETG
NGVSSIDVWCRYLFPGTFLVFNISYWICYLVIL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaggttattacttatattcaactttttcagatacacatggtcacagttcccaacctat
gcagaaaatacaactgatgtgctagacaagctacttacagggtatcgaaaggagataaga
cctggatttggaggtccacctctggttgttgaaacagatattctgattagaagcattggg
caaatctctgaaagcaatatggattactcctttcaatgttactttagacaaagatggaca
gatgaaaggttacagtttgacatcagaaacatcaccgaagttactctaaataatttgttc
ctggaaaatatttggaaaccaaacacttacttcctaaacggtcagaaatctcaccagcat
aatattcccagaccaaatttgtttgttcgcatcagaaatgacggacgagtatatttgtct
cggagactaacagtaaaggcagcatgtccaatgaagctaaatctttatcccatggacaga
cctatatgttctctagaattgggaagttatggatatacaacagacgatatagtttattta
tggaaatatgggaacaacatttctgtagaggtcaataaagatgtccgacttgcacaattc
gatctcatctcagtgacgtcgagtaatcattcagataaaaccgtatttggaacattctct
gttttgaaagtgtttatctactttgaacgtcatattgggttttttgttttgcaaacatac
cttccctgtagtatgatcacgtgcctgtcatgggtttcgttttggataaaccgtgatgca
gcaccagctcgtgttctattaggtgtgacaacgatattagcgacagcgggtattggaatg
acggttagagaaggcttacctcgggtttcctacgctacggcgttagacacatatctaaac
gcatgtgttatctacgagatggcggccatgattgagtacgctgctgttaattattttacg
aaagttttacctgtagacggtggtgctgaatctgatgaagacgaggaagaaatagctcct
ctaacaactccagatcagtcagtgagggtatatctttatcaagacacgttgaatggtgaa
tcggtcccgttatctaacgttcaatctatgtctgatacattgggtggaacaactgcacat
cgtaaaagtagaaaccgacggaaagagcaaaggtcatttcgtcatctctttctaaaatgt
ttgacaggaaatccaaaatttaggtcaaaactccgagaacgaggcaatgctgaaaccgga
aatggtgtcagtagcattgatgtttggtgtagatatctttttcctggaacatttctggtt
tttaatatatcttactggatttgttatctagttattttgtag
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